FFCP PHASE1:Mm9::chr10:23516858..23516876,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76306|HGNC=|MCL_coexpression_id=12|UniProt=D6RGT8|association_with_transcript=0bp_to_ENSMUST00000134170_5end|description=CAGE_peak_2_at_1110021L09Rik_5end|id=chr10:23516858..23516876,+|ontology_enrichment_celltype=CL:0002563!2.16e-07!9;CL:0002251!2.16e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.09e-18,9;CL:0002251,7.09e-18,9;CL:0000239,2.19e-13,6;CL:0000677,2.19e-13,6;CL:0000584,2.19e-13,6;CL:0000075,2.37e-11,7;CL:0002076,5.28e-10,15;CL:0000066,5.62e-10,25;CL:0000682,1.84e-07,3;CL:0000223,4.54e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.17e-11!15;UBERON:0000160!7.97e-11!43;UBERON:0001242!2.68e-10!13;UBERON:0000060!2.68e-10!13;UBERON:0001262!2.68e-10!13;UBERON:0004786!2.68e-10!13;UBERON:0005409!6.51e-08!59;UBERON:0003350!2.16e-07!9;UBERON:0004808!2.16e-07!9;UBERON:0001277!2.16e-07!9;UBERON:0000485!4.65e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-41,31;UBERON:0000344,7.90e-30,15;UBERON:0005409,2.15e-27,47;UBERON:0001242,5.21e-26,13;UBERON:0001262,5.21e-26,13;UBERON:0004786,5.21e-26,13;UBERON:0003350,7.09e-18,9;UBERON:0004808,7.09e-18,9;UBERON:0001277,7.09e-18,9;UBERON:0004923,3.27e-17,24;UBERON:0000485,2.70e-14,11;UBERON:0002108,2.48e-09,4;UBERON:0001007,7.19e-09,116;UBERON:0001555,7.19e-09,116;UBERON:0007026,7.19e-09,116;UBERON:0004119,1.33e-08,118;UBERON:0000925,1.33e-08,118;UBERON:0006595,1.33e-08,118;UBERON:0004921,2.06e-07,114;UBERON:0000331,2.23e-07,3;UBERON:0002116,2.23e-07,3;UBERON:0001204,2.23e-07,3;UBERON:0001168,2.23e-07,3|phase1_expression=0.320297694209588,12.2141392673776,10.4649825059593,29.3390284967625,17.0304548181758,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.51983330145495,3.89995777814189,9.76194338995534,6.8921919385452,4.30942465371778,9.31114755336232,9.32511480111744,2.88249663851896,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0,0.244981598429908,0,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,0.842666520790511,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.94112595522402,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0.628332956648377,0,2.4581890676385,0,0,0,0,3.72783522436244,0,0.209446706813455,12.517395705221,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0,0,2.52530227063769,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.468508622798644,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.243206428637567,0,0.439100230582101,0.134206418760372,0.420579897128254,0.308713837137853,32.3810407324122,17.982638533121,0,0,0.257734922644187,0.80673409849337,0.667134131534611,1.14135375667535,9.01605216934572,1.31759163779209,1.50801125280162,1.1937388322469,1.75467678407208,4.49409704327111,10.8069024937347,12.3467589417708,0.379335801906163,0,1.1270773567308,0.610953983535943,0.969762435838129,1.05203729835478,2.15004226222475,2.36176236767363,3.1399745568275,3.20832626196681,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.586058432961016,0,0.504941854408746,0,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0,0,0.963963949265421,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.361877549568935,0.119372344003136,0.164140899745061,7.28702091574627,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.436725127492355,0.404593039154462,0.330613822901344,0,1.8146096260851,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.09364150746988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| ||
|EntrezGene=76306 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=D6RGT8 | |||
|association_with_transcript=0bp_to_ENSMUST00000134170_5end | |||
|description=CAGE_peak_2_at_1110021L09Rik_5end | |||
|id=chr10:23516858..23516876,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.16e-07!9;CL:0002251!2.16e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.09e-18,9;CL:0002251,7.09e-18,9;CL:0000239,2.19e-13,6;CL:0000677,2.19e-13,6;CL:0000584,2.19e-13,6;CL:0000075,2.37e-11,7;CL:0002076,5.28e-10,15;CL:0000066,5.62e-10,25;CL:0000682,1.84e-07,3;CL:0000223,4.54e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.17e-11!15;UBERON:0000160!7.97e-11!43;UBERON:0001242!2.68e-10!13;UBERON:0000060!2.68e-10!13;UBERON:0001262!2.68e-10!13;UBERON:0004786!2.68e-10!13;UBERON:0005409!6.51e-08!59;UBERON:0003350!2.16e-07!9;UBERON:0004808!2.16e-07!9;UBERON:0001277!2.16e-07!9;UBERON:0000485!4.65e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.00e-41,31;UBERON:0000344,7.90e-30,15;UBERON:0005409,2.15e-27,47;UBERON:0001242,5.21e-26,13;UBERON:0001262,5.21e-26,13;UBERON:0004786,5.21e-26,13;UBERON:0003350,7.09e-18,9;UBERON:0004808,7.09e-18,9;UBERON:0001277,7.09e-18,9;UBERON:0004923,3.27e-17,24;UBERON:0000485,2.70e-14,11;UBERON:0002108,2.48e-09,4;UBERON:0001007,7.19e-09,116;UBERON:0001555,7.19e-09,116;UBERON:0007026,7.19e-09,116;UBERON:0004119,1.33e-08,118;UBERON:0000925,1.33e-08,118;UBERON:0006595,1.33e-08,118;UBERON:0004921,2.06e-07,114;UBERON:0000331,2.23e-07,3;UBERON:0002116,2.23e-07,3;UBERON:0001204,2.23e-07,3;UBERON:0001168,2.23e-07,3 | |||
|phase1_expression=0.320297694209588,12.2141392673776,10.4649825059593,29.3390284967625,17.0304548181758,1.84667199103079,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,3.51983330145495,3.89995777814189,9.76194338995534,6.8921919385452,4.30942465371778,9.31114755336232,9.32511480111744,2.88249663851896,0,0,0,2.02196133825892,1.49611180822643,1.02084678131185,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.183546752161682,0,0.436050312760893,0.219686182734472,0.388859798148567,0.55994568650145,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0,0.244981598429908,0,0,0,0.255374676170375,0.307213066512487,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,0.679971333707751,0.539703191637817,0,0,0.842666520790511,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,1.94112595522402,0,0.148442139064825,0,0,0,0.150722640552623,0.470354828542819,0.628332956648377,0,2.4581890676385,0,0,0,0,3.72783522436244,0,0.209446706813455,12.517395705221,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0,0,2.52530227063769,0,0.229902104433473,0.180062129805349,0.150704817835715,0.204109497453984,0.384341160854549,0.468508622798644,0.517406741478031,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.243206428637567,0,0.439100230582101,0.134206418760372,0.420579897128254,0.308713837137853,32.3810407324122,17.982638533121,0,0,0.257734922644187,0.80673409849337,0.667134131534611,1.14135375667535,9.01605216934572,1.31759163779209,1.50801125280162,1.1937388322469,1.75467678407208,4.49409704327111,10.8069024937347,12.3467589417708,0.379335801906163,0,1.1270773567308,0.610953983535943,0.969762435838129,1.05203729835478,2.15004226222475,2.36176236767363,3.1399745568275,3.20832626196681,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0,0.390267295715598,0.315270288212382,0.44292937929755,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.586058432961016,0,0.504941854408746,0,0,0.430846795465598,0,0,0.283076530788832,0.404810701674894,0,0,0.963963949265421,0.425820255624806,0,0,0,0,0,0,0.188605079755898,0.295301892880773,0,0.516856586336442,0,0,0,0,0,0.680879211507576,0.18006109403131,0.258717367565509,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.16488625294148,0,0.361877549568935,0.119372344003136,0.164140899745061,7.28702091574627,0,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0.436725127492355,0.404593039154462,0.330613822901344,0,1.8146096260851,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0.337912250981556,0.117357238645754,0.13020438484395,0.104859344425711,0,0.288030006257865,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.36630324853453,0,0,0,0,0,0,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0,0,0,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.565879024158229,0.0936415074698824,0.192075457214608,0.229741875822453,1.90517476513229,0,0,0,0,0,0.70990322463735,0,0.726732083161643,0.470546902076653,0.25384382367503,0,0,0.543216455383447,1.12228454331548,0.118635018124174,0.197008964751127,0,0.154936841185966,0.578719832943424,0,0,0.644613162144895,0.382576664137687,0,1.39120701372253 | |||
|short_description=p2@1110021L09Rik | |||
}} |
Revision as of 16:28, 12 September 2013
Short description: | p2@1110021L09Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_1110021L09Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000134170_5end |
EntrezGene: | 1110021L09Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.09e-18 | 9 |
epithelial cell of alimentary canal | 7.09e-18 | 9 |
brush border epithelial cell | 2.19e-13 | 6 |
gut absorptive cell | 2.19e-13 | 6 |
enterocyte | 2.19e-13 | 6 |
columnar/cuboidal epithelial cell | 2.37e-11 | 7 |
endo-epithelial cell | 5.28e-10 | 15 |
epithelial cell | 5.62e-10 | 25 |
M cell of gut | 1.84e-07 | 3 |
endodermal cell | 4.54e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.00e-41 | 31 |
mucosa | 7.90e-30 | 15 |
gastrointestinal system | 2.15e-27 | 47 |
intestinal mucosa | 5.21e-26 | 13 |
wall of intestine | 5.21e-26 | 13 |
gastrointestinal system mucosa | 5.21e-26 | 13 |
epithelium of mucosa | 7.09e-18 | 9 |
gastrointestinal system epithelium | 7.09e-18 | 9 |
intestinal epithelium | 7.09e-18 | 9 |
organ component layer | 3.27e-17 | 24 |
simple columnar epithelium | 2.70e-14 | 11 |
small intestine | 2.48e-09 | 4 |
digestive system | 7.19e-09 | 116 |
digestive tract | 7.19e-09 | 116 |
primitive gut | 7.19e-09 | 116 |
endoderm-derived structure | 1.33e-08 | 118 |
endoderm | 1.33e-08 | 118 |
presumptive endoderm | 1.33e-08 | 118 |
subdivision of digestive tract | 2.06e-07 | 114 |
ileal mucosa | 2.23e-07 | 3 |
ileum | 2.23e-07 | 3 |
mucosa of small intestine | 2.23e-07 | 3 |
wall of small intestine | 2.23e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.