FFCP PHASE1:Mm9::chr10:72120072..72120087,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:72120072..72120087,+|id=chr10:72120072..72120087,+|ontology_enrichment_celltype=CL:0000393!9.36e-13!39;CL:0000211!9.36e-13!39;CL:0000540!1.58e-12!33;CL:0000047!1.58e-12!33;CL:0000031!1.58e-12!33;CL:0000404!1.58e-12!33;CL:0000117!2.94e-12!23;CL:0000337!2.94e-12!23;CL:0000221!2.71e-09!44;CL:0000133!2.71e-09!44;CL:0000055!3.83e-09!50;CL:0002319!4.01e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-20,23;CL:0000337,1.43e-20,23;CL:0000540,2.96e-13,33;CL:0000047,2.96e-13,33;CL:0000031,2.96e-13,33;CL:0000404,2.96e-13,33;CL:0000393,3.54e-12,39;CL:0000211,3.54e-12,39;CL:0002319,2.28e-09,43;CL:0000221,4.45e-09,44;CL:0000133,4.45e-09,44;CL:0002614,5.92e-09,3;CL:0002610,2.74e-08,3;CL:0002612,7.73e-08,3;CL:0002613,8.16e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0000073!6.30e-21!75;UBERON:0001016!6.30e-21!75;UBERON:0001049!3.05e-20!52;UBERON:0005068!3.05e-20!52;UBERON:0006241!3.05e-20!52;UBERON:0007135!3.05e-20!52;UBERON:0000955!6.90e-20!50;UBERON:0006238!6.90e-20!50;UBERON:0002616!2.80e-19!49;UBERON:0002020!4.44e-19!34;UBERON:0002346!3.52e-18!71;UBERON:0003075!3.52e-18!71;UBERON:0007284!3.52e-18!71;UBERON:0003080!2.58e-17!40;UBERON:0004121!3.56e-17!102;UBERON:0000924!3.56e-17!102;UBERON:0006601!3.56e-17!102;UBERON:0002780!5.21e-17!39;UBERON:0001890!5.21e-17!39;UBERON:0006240!5.21e-17!39;UBERON:0000033!6.62e-16!63;UBERON:0002791!7.56e-16!29;UBERON:0003528!7.56e-16!29;UBERON:0001893!7.56e-16!29;UBERON:0003056!1.95e-14!49;UBERON:0000956!5.92e-11!21;UBERON:0001869!5.92e-11!21;UBERON:0000203!5.92e-11!21;UBERON:0007811!2.53e-10!86;UBERON:0000025!5.18e-10!114;UBERON:0002619!1.24e-09!17;UBERON:0004111!6.42e-09!122;UBERON:0000153!2.08e-08!94;UBERON:0002021!5.17e-08!10;UBERON:0000411!5.17e-08!10;UBERON:0001950!5.17e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.23e-30,54;UBERON:0002020,1.43e-27,34;UBERON:0001017,1.52e-25,73;UBERON:0001016,1.12e-24,75;UBERON:0001049,5.20e-24,52;UBERON:0005068,5.20e-24,52;UBERON:0006241,5.20e-24,52;UBERON:0007135,5.20e-24,52;UBERON:0003528,2.74e-21,29;UBERON:0002791,2.74e-21,29;UBERON:0001893,2.74e-21,29;UBERON:0000955,2.50e-20,47;UBERON:0006238,2.50e-20,47;UBERON:0002021,4.55e-19,10;UBERON:0000411,4.55e-19,10;UBERON:0001950,4.55e-19,10;UBERON:0002616,5.96e-19,46;UBERON:0002780,1.09e-18,39;UBERON:0001890,1.09e-18,39;UBERON:0006240,1.09e-18,39;UBERON:0002346,2.21e-18,64;UBERON:0003075,2.21e-18,64;UBERON:0007284,2.21e-18,64;UBERON:0003080,4.19e-18,40;UBERON:0004121,5.17e-18,95;UBERON:0000924,5.17e-18,95;UBERON:0006601,5.17e-18,95;UBERON:0010371,2.23e-15,73;UBERON:0002420,9.52e-15,8;UBERON:0007245,9.52e-15,8;UBERON:0010009,9.52e-15,8;UBERON:0010011,9.52e-15,8;UBERON:0000454,9.52e-15,8;UBERON:0003056,6.34e-14,49;UBERON:0010314,4.82e-12,92;UBERON:0002619,1.80e-10,17;UBERON:0000956,4.85e-10,21;UBERON:0001869,4.85e-10,21;UBERON:0000203,4.85e-10,21;UBERON:0000025,1.75e-09,114;UBERON:0002038,5.92e-09,3;UBERON:0009663,5.92e-09,3;UBERON:0009661,5.92e-09,3;UBERON:0000125,5.92e-09,3;UBERON:0002308,5.92e-09,3;UBERON:0004111,1.87e-08,122;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0002257,7.73e-08,3;UBERON:0000369,9.17e-08,5;UBERON:0002435,9.17e-08,5;UBERON:0000204,9.17e-08,5;UBERON:0010082,9.17e-08,5;UBERON:0001948,9.96e-08,5;UBERON:0002315,9.96e-08,5;UBERON:0002950,8.89e-07,4;UBERON:0001891,8.89e-07,4;UBERON:0009616,8.89e-07,4;UBERON:0010286,8.89e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.398860794976682,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0,0,0,0.255129870453209,0.496454756004426,0.261199789138935,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.01158230429799,0,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.630974884054146,0.856952953211411,1.32521124570968,0.244981598429908,0.766763768145891,0.919218786610021,2.20231761998777,2.55374676170375,4.45458946443106,1.31886287730194,2.10421580285542,3.12548022334056,4.4669279840221,10.1297269805702,7.18151764551008,2.06240009831567,5.97961059356232,1.3047961207771,0.37863096666592,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0.681721290312231,2.07828803682295,0,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.904335843315735,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.449371918214468,1.37250180845588,0.251308704225729,1.91206752211504,1.02286182932132,2.0778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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:72120072..72120087,+ | |||
|id=chr10:72120072..72120087,+ | |||
|ontology_enrichment_celltype=CL:0000393!9.36e-13!39;CL:0000211!9.36e-13!39;CL:0000540!1.58e-12!33;CL:0000047!1.58e-12!33;CL:0000031!1.58e-12!33;CL:0000404!1.58e-12!33;CL:0000117!2.94e-12!23;CL:0000337!2.94e-12!23;CL:0000221!2.71e-09!44;CL:0000133!2.71e-09!44;CL:0000055!3.83e-09!50;CL:0002319!4.01e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-20,23;CL:0000337,1.43e-20,23;CL:0000540,2.96e-13,33;CL:0000047,2.96e-13,33;CL:0000031,2.96e-13,33;CL:0000404,2.96e-13,33;CL:0000393,3.54e-12,39;CL:0000211,3.54e-12,39;CL:0002319,2.28e-09,43;CL:0000221,4.45e-09,44;CL:0000133,4.45e-09,44;CL:0002614,5.92e-09,3;CL:0002610,2.74e-08,3;CL:0002612,7.73e-08,3;CL:0002613,8.16e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.44e-21!73;UBERON:0005743!2.44e-21!73;UBERON:0000073!6.30e-21!75;UBERON:0001016!6.30e-21!75;UBERON:0001049!3.05e-20!52;UBERON:0005068!3.05e-20!52;UBERON:0006241!3.05e-20!52;UBERON:0007135!3.05e-20!52;UBERON:0000955!6.90e-20!50;UBERON:0006238!6.90e-20!50;UBERON:0002616!2.80e-19!49;UBERON:0002020!4.44e-19!34;UBERON:0002346!3.52e-18!71;UBERON:0003075!3.52e-18!71;UBERON:0007284!3.52e-18!71;UBERON:0003080!2.58e-17!40;UBERON:0004121!3.56e-17!102;UBERON:0000924!3.56e-17!102;UBERON:0006601!3.56e-17!102;UBERON:0002780!5.21e-17!39;UBERON:0001890!5.21e-17!39;UBERON:0006240!5.21e-17!39;UBERON:0000033!6.62e-16!63;UBERON:0002791!7.56e-16!29;UBERON:0003528!7.56e-16!29;UBERON:0001893!7.56e-16!29;UBERON:0003056!1.95e-14!49;UBERON:0000956!5.92e-11!21;UBERON:0001869!5.92e-11!21;UBERON:0000203!5.92e-11!21;UBERON:0007811!2.53e-10!86;UBERON:0000025!5.18e-10!114;UBERON:0002619!1.24e-09!17;UBERON:0004111!6.42e-09!122;UBERON:0000153!2.08e-08!94;UBERON:0002021!5.17e-08!10;UBERON:0000411!5.17e-08!10;UBERON:0001950!5.17e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.23e-30,54;UBERON:0002020,1.43e-27,34;UBERON:0001017,1.52e-25,73;UBERON:0001016,1.12e-24,75;UBERON:0001049,5.20e-24,52;UBERON:0005068,5.20e-24,52;UBERON:0006241,5.20e-24,52;UBERON:0007135,5.20e-24,52;UBERON:0003528,2.74e-21,29;UBERON:0002791,2.74e-21,29;UBERON:0001893,2.74e-21,29;UBERON:0000955,2.50e-20,47;UBERON:0006238,2.50e-20,47;UBERON:0002021,4.55e-19,10;UBERON:0000411,4.55e-19,10;UBERON:0001950,4.55e-19,10;UBERON:0002616,5.96e-19,46;UBERON:0002780,1.09e-18,39;UBERON:0001890,1.09e-18,39;UBERON:0006240,1.09e-18,39;UBERON:0002346,2.21e-18,64;UBERON:0003075,2.21e-18,64;UBERON:0007284,2.21e-18,64;UBERON:0003080,4.19e-18,40;UBERON:0004121,5.17e-18,95;UBERON:0000924,5.17e-18,95;UBERON:0006601,5.17e-18,95;UBERON:0010371,2.23e-15,73;UBERON:0002420,9.52e-15,8;UBERON:0007245,9.52e-15,8;UBERON:0010009,9.52e-15,8;UBERON:0010011,9.52e-15,8;UBERON:0000454,9.52e-15,8;UBERON:0003056,6.34e-14,49;UBERON:0010314,4.82e-12,92;UBERON:0002619,1.80e-10,17;UBERON:0000956,4.85e-10,21;UBERON:0001869,4.85e-10,21;UBERON:0000203,4.85e-10,21;UBERON:0000025,1.75e-09,114;UBERON:0002038,5.92e-09,3;UBERON:0009663,5.92e-09,3;UBERON:0009661,5.92e-09,3;UBERON:0000125,5.92e-09,3;UBERON:0002308,5.92e-09,3;UBERON:0004111,1.87e-08,122;UBERON:0004684,2.74e-08,3;UBERON:0002275,2.74e-08,3;UBERON:0002257,7.73e-08,3;UBERON:0000369,9.17e-08,5;UBERON:0002435,9.17e-08,5;UBERON:0000204,9.17e-08,5;UBERON:0010082,9.17e-08,5;UBERON:0001948,9.96e-08,5;UBERON:0002315,9.96e-08,5;UBERON:0002950,8.89e-07,4;UBERON:0001891,8.89e-07,4;UBERON:0009616,8.89e-07,4;UBERON:0010286,8.89e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0.34243593645101,0.398860794976682,0,0.0874204024189974,0.333109761815663,0,0.699561878128147,0,0,0,0.255129870453209,0.496454756004426,0.261199789138935,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0.577703239502549,0,0,0,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.304130793658544,0,0,0.218025156380447,0.219686182734472,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,1.01158230429799,0,1.26766280701236,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0.630974884054146,0.856952953211411,1.32521124570968,0.244981598429908,0.766763768145891,0.919218786610021,2.20231761998777,2.55374676170375,4.45458946443106,1.31886287730194,2.10421580285542,3.12548022334056,4.4669279840221,10.1297269805702,7.18151764551008,2.06240009831567,5.97961059356232,1.3047961207771,0.37863096666592,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0.681721290312231,2.07828803682295,0,0.281686839553361,0,0,0,0.865964164044856,0.506719730950197,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0.608930956624282,0.461230994512117,0.904335843315735,0.23517741427141,0,0.247194967734374,0.144599356919912,0,0.323533699894818,0,0.484875253135222,0,0,0.41889341362691,0,0.239630249011841,0,0.127070227073065,0.449371918214468,1.37250180845588,0.251308704225729,1.91206752211504,1.02286182932132,2.0778804455956,1.29793010454206,0.101839363850316,0.124406970610093,0.505445516867349,0,0.130120442962704,0.459804208866946,0,0,0.0680364991513279,0.512454881139399,0.374806898238915,0,0.215567992932842,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0.257347907114715,0.568326998791185,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0,0.146199987425332,0,0.268412837520744,0.841159794256509,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0.228497025219458,0,0,0.193952487167626,0.0701358198903186,0,0,0.156998727841375,0,0,0,0,0,0,0,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0.252578877947112,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0.238043640886014,0,0,0,0,0.327726629431476,0,0,1.50791283939272,0.54390568381871,0.491764273019036,0,2.0871576698413,1.75817529888305,0.163934945376675,0,0.315508219416257,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,0.395287777946524,1.28528526568723,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.164549020602121,0.304464949114599,0.704015124191131,1.0591603543191,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0.206386867963223,0,0.188368457004691,0.136694227721025,0,0,0.279902904647316,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,1.12738587736838,0.448549638131936,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,0,0.608175645870493,0.205421914329655,0.25984164595559,0,0.198681354781265,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0.665957860122194,1.34570784914214,0.671538465456314,0,0,0,0,0.501572104035363,0.564751842617067,2.76195141904306,2.86447756719698,1.3748254587495,4.7955776383945,3.0215755895588,3.37511250115903,4.05289082901798,1.35942722695261,2.5888015587591,0.830298780673413,0,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0,0.38581844092741,0,0.294397840268795,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr10:72120072..72120087,+ | |||
}} |
Revision as of 17:18, 12 September 2013
Short description: | p@chr10:72120072..72120087, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:72120072..72120087, + |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-20 | 23 |
neuron | 2.96e-13 | 33 |
neuronal stem cell | 2.96e-13 | 33 |
neuroblast | 2.96e-13 | 33 |
electrically signaling cell | 2.96e-13 | 33 |
electrically responsive cell | 3.54e-12 | 39 |
electrically active cell | 3.54e-12 | 39 |
neural cell | 2.28e-09 | 43 |
ectodermal cell | 4.45e-09 | 44 |
neurectodermal cell | 4.45e-09 | 44 |
neuron of the substantia nigra | 5.92e-09 | 3 |
raphe nuclei neuron | 2.74e-08 | 3 |
neuron of the ventral spinal cord | 7.73e-08 | 3 |
striatum neuron | 8.16e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.