FFCP PHASE1:Hg19::chr2:238604341..238604365,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C306|description=CAGE_peak_at_chr2:238604341..238604365,+|id=chr2:238604341..238604365,+|ontology_enrichment_celltype=CL:0000738!8.79e-34!140;CL:0002087!7.83e-30!119;CL:0002031!2.60e-29!124;CL:0000037!6.69e-26!172;CL:0000566!6.69e-26!172;CL:0002032!3.67e-25!165;CL:0000837!3.67e-25!165;CL:0000766!6.30e-25!76;CL:0002057!7.00e-24!42;CL:0000557!8.83e-24!71;CL:0002009!1.68e-23!65;CL:0000988!3.58e-23!182;CL:0002194!1.02e-22!63;CL:0000576!1.02e-22!63;CL:0000040!1.02e-22!63;CL:0000559!1.02e-22!63;CL:0000839!2.81e-22!70;CL:0000860!1.38e-21!45;CL:0000763!5.73e-18!112;CL:0000049!5.73e-18!112;CL:0002393!3.26e-08!9;CL:0002397!3.26e-08!9;CL:0000838!1.98e-07!52;CL:0000542!4.66e-07!53;CL:0000051!4.66e-07!53|ontology_enrichment_celltype_v019=CL:0000766;2.24e-20;69!CL:0000576;1.97e-18;48!CL:0002393;3.84e-18;6!CL:0002397;3.84e-18;6!CL:0000473;1.99e-15;39!CL:0000234;1.99e-15;39!CL:0000860;1.94e-14;33!CL:0002057;1.94e-14;33!CL:0000738;1.77e-11;136!CL:0000623;1.57e-10;3!CL:0002087;1.60e-10;104!CL:0000226;1.11e-09;3!CL:0000842;1.11e-09;3!CL:0000875;1.75e-09;3!CL:0002396;1.75e-09;3!CL:0000763;7.38e-09;100!CL:0000988;1.16e-07;177|ontology_enrichment_celltype_v019_2=CL:0000738,2.84e-47,136;CL:0000766,1.05e-42,72;CL:0002087,2.46e-39,115;CL:0002031,5.07e-39,120;CL:0000557,8.71e-38,67;CL:0000037,1.58e-37,168;CL:0000473,2.42e-37,48;CL:0000234,2.42e-37,48;CL:0000839,6.10e-36,66;CL:0000988,5.75e-35,177;CL:0002032,2.38e-34,161;CL:0000837,2.38e-34,161;CL:0002009,2.64e-34,61;CL:0000860,4.39e-34,42;CL:0002057,4.39e-34,42;CL:0002194,3.75e-33,59;CL:0000576,3.75e-33,59;CL:0000040,3.75e-33,59;CL:0000559,3.75e-33,59;CL:0000763,7.80e-29,108;CL:0000049,7.80e-29,108;CL:0002393,2.67e-26,9;CL:0002397,2.67e-26,9;CL:0000134,2.38e-13,354;CL:0002320,7.76e-13,361;CL:0000219,9.31e-12,386;CL:0000623,1.44e-10,3;CL:0000825,1.44e-10,3;CL:0000875,9.76e-10,3;CL:0002396,9.76e-10,3;CL:0000226,1.31e-09,3;CL:0000842,1.31e-09,3;CL:0000048,7.63e-09,427;CL:0000034,1.00e-08,441;CL:0000723,1.52e-08,433|ontology_enrichment_development_v019=CL:0002057;9.76e-23;42!CL:0000049;3.31e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.39e-23!102;UBERON:0003061!8.39e-23!102;UBERON:0002371!7.41e-21!80;UBERON:0001474!2.01e-19!86;UBERON:0002193!3.70e-19!112;UBERON:0004765!3.82e-14!101;UBERON:0001434!3.82e-14!101;UBERON:0002405!1.72e-13!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-34,76;UBERON:0001474,2.20e-31,82;UBERON:0002390,1.72e-30,98;UBERON:0003061,1.72e-30,98;UBERON:0004765,7.99e-28,90;UBERON:0002193,8.57e-27,108;UBERON:0002405,1.20e-26,93;UBERON:0001434,3.57e-24,100;UBERON:0003081,1.52e-12,203;UBERON:0002384,3.88e-12,371;UBERON:0002204,4.25e-11,167|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0.305653622991805,0.0821005894499457,0.157421562627358,2.75354993794233,4.22212337906934,0.928896739896456,0,0,0,0.154934401160603,0.426507697462265,0,7.20194031091441,13.2359335330294,14.1057065965304,0.671746422719773,0,0.257575567634187,0.436194716338694,0.755751887377619,0.727752183563449,1.16214518452842,2.05583944010913,0.929119112685311,0.575384784644301,0.768482119587302,0,1.37898272294647,0.645484683583826,2.70852973188684,0.188242339542605,1.36453075028923,0.674170453335254,2.44867113896722,1.60464513538047,1.27867425159808,0.329851300186716,0.598390972864896,0.852449501065388,1.45104619314292,1.70215567407342,0.622822248995575,2.26123798731069,4.17186334736161,0.868755378820466,0.605399502633369,0.368277635987565,0.316462387440884,1.47878700418359,2.33864729961548,1.67726916406701,1.23561494261145,2.25265339262259,2.08943262706204,1.99508920618874,2.38700012638908,2.55729815270488,0,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,11.384259382189,9.98303221930596,7.26319133437935,0,1.12101712596307,0.526768169550154,4.52432471261816,12.5763444079733,10.896879446974,0,0.32592226663359,0,1.94826728407911,0,0.589211814949674,0,0.812411591295047,0.128091319725675,0.910415432919148,0.493313713811028,0.829050053357545,0,0.741432815810302,0.802622484269139,2.09071047609954,0.226618685395132,0.383220493601921,0.68725489096526,0.506039384039006,0,0,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,5.44338206706778,14.1743303765259,11.8756011183895,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,1.21890816109487,1.59549552622638,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0.516833518338658,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0,0,0.24666754841716,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr2:238604341..238604365,+ | |||
|id=chr2:238604341..238604365,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.79e-34!140;CL:0002087!7.83e-30!119;CL:0002031!2.60e-29!124;CL:0000037!6.69e-26!172;CL:0000566!6.69e-26!172;CL:0002032!3.67e-25!165;CL:0000837!3.67e-25!165;CL:0000766!6.30e-25!76;CL:0002057!7.00e-24!42;CL:0000557!8.83e-24!71;CL:0002009!1.68e-23!65;CL:0000988!3.58e-23!182;CL:0002194!1.02e-22!63;CL:0000576!1.02e-22!63;CL:0000040!1.02e-22!63;CL:0000559!1.02e-22!63;CL:0000839!2.81e-22!70;CL:0000860!1.38e-21!45;CL:0000763!5.73e-18!112;CL:0000049!5.73e-18!112;CL:0002393!3.26e-08!9;CL:0002397!3.26e-08!9;CL:0000838!1.98e-07!52;CL:0000542!4.66e-07!53;CL:0000051!4.66e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000766;2.24e-20;69!CL:0000576;1.97e-18;48!CL:0002393;3.84e-18;6!CL:0002397;3.84e-18;6!CL:0000473;1.99e-15;39!CL:0000234;1.99e-15;39!CL:0000860;1.94e-14;33!CL:0002057;1.94e-14;33!CL:0000738;1.77e-11;136!CL:0000623;1.57e-10;3!CL:0002087;1.60e-10;104!CL:0000226;1.11e-09;3!CL:0000842;1.11e-09;3!CL:0000875;1.75e-09;3!CL:0002396;1.75e-09;3!CL:0000763;7.38e-09;100!CL:0000988;1.16e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.84e-47,136;CL:0000766,1.05e-42,72;CL:0002087,2.46e-39,115;CL:0002031,5.07e-39,120;CL:0000557,8.71e-38,67;CL:0000037,1.58e-37,168;CL:0000473,2.42e-37,48;CL:0000234,2.42e-37,48;CL:0000839,6.10e-36,66;CL:0000988,5.75e-35,177;CL:0002032,2.38e-34,161;CL:0000837,2.38e-34,161;CL:0002009,2.64e-34,61;CL:0000860,4.39e-34,42;CL:0002057,4.39e-34,42;CL:0002194,3.75e-33,59;CL:0000576,3.75e-33,59;CL:0000040,3.75e-33,59;CL:0000559,3.75e-33,59;CL:0000763,7.80e-29,108;CL:0000049,7.80e-29,108;CL:0002393,2.67e-26,9;CL:0002397,2.67e-26,9;CL:0000134,2.38e-13,354;CL:0002320,7.76e-13,361;CL:0000219,9.31e-12,386;CL:0000623,1.44e-10,3;CL:0000825,1.44e-10,3;CL:0000875,9.76e-10,3;CL:0002396,9.76e-10,3;CL:0000226,1.31e-09,3;CL:0000842,1.31e-09,3;CL:0000048,7.63e-09,427;CL:0000034,1.00e-08,441;CL:0000723,1.52e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.76e-23;42!CL:0000049;3.31e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.39e-23!102;UBERON:0003061!8.39e-23!102;UBERON:0002371!7.41e-21!80;UBERON:0001474!2.01e-19!86;UBERON:0002193!3.70e-19!112;UBERON:0004765!3.82e-14!101;UBERON:0001434!3.82e-14!101;UBERON:0002405!1.72e-13!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.52e-34,76;UBERON:0001474,2.20e-31,82;UBERON:0002390,1.72e-30,98;UBERON:0003061,1.72e-30,98;UBERON:0004765,7.99e-28,90;UBERON:0002193,8.57e-27,108;UBERON:0002405,1.20e-26,93;UBERON:0001434,3.57e-24,100;UBERON:0003081,1.52e-12,203;UBERON:0002384,3.88e-12,371;UBERON:0002204,4.25e-11,167 | |||
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| |||
|short_description=p@chr2:238604341..238604365,+ | |||
}} |
Revision as of 17:39, 12 September 2013
Short description: | p@chr2:238604341..238604365, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238604341..238604365, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.52e-34 | 76 |
bone element | 2.20e-31 | 82 |
hematopoietic system | 1.72e-30 | 98 |
blood island | 1.72e-30 | 98 |
skeletal element | 7.99e-28 | 90 |
hemolymphoid system | 8.57e-27 | 108 |
immune system | 1.20e-26 | 93 |
skeletal system | 3.57e-24 | 100 |
lateral plate mesoderm | 1.52e-12 | 203 |
connective tissue | 3.88e-12 | 371 |
musculoskeletal system | 4.25e-11 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.