FFCP PHASE1:Mm9::chr10:96084020..96084029,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:96084020..96084029,+|id=chr10:96084020..96084029,+|ontology_enrichment_celltype=CL:0000791!3.75e-07!9;CL:0000789!3.75e-07!9;CL:0002420!3.75e-07!9;CL:0002419!3.75e-07!9;CL:0000790!3.75e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,2.92e-16,32;CL:0002032,2.92e-16,32;CL:0000037,2.92e-16,32;CL:0000837,2.92e-16,32;CL:0002320,1.65e-15,46;CL:0000134,1.65e-15,46;CL:0002031,3.58e-15,25;CL:0000219,5.20e-15,54;CL:0000791,2.45e-14,9;CL:0000789,2.45e-14,9;CL:0002420,2.45e-14,9;CL:0002419,2.45e-14,9;CL:0000790,2.45e-14,9;CL:0000838,3.38e-13,12;CL:0000738,4.11e-13,17;CL:0002087,4.11e-13,17;CL:0000624,2.05e-12,8;CL:0000542,5.05e-12,13;CL:0000051,5.05e-12,13;CL:0000084,2.03e-11,11;CL:0000827,2.03e-11,11;CL:0000034,5.19e-09,97;CL:0000893,1.12e-08,6;CL:0002489,1.12e-08,6;CL:0000898,1.12e-08,6;CL:0000809,1.12e-08,6;CL:0000810,1.12e-08,6;CL:0000895,1.12e-08,6;CL:0000808,1.12e-08,6;CL:0000894,1.12e-08,6;CL:0000806,1.12e-08,6;CL:0000807,1.12e-08,6;CL:0000805,1.12e-08,6;CL:0002425,1.12e-08,6;CL:0002436,1.12e-08,6;CL:0002427,1.12e-08,6;CL:0002428,1.12e-08,6;CL:0002429,1.12e-08,6;CL:0002433,1.12e-08,6;CL:0002431,1.12e-08,6;CL:0002432,1.12e-08,6;CL:0000723,1.99e-07,91;CL:0000048,1.99e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.65e-15,46;UBERON:0002390,1.85e-09,45;UBERON:0003061,1.85e-09,45;UBERON:0002193,1.35e-08,48;UBERON:0002405,1.35e-08,48;UBERON:0002370,5.24e-08,23;UBERON:0000974,5.24e-08,23;UBERON:0004807,5.24e-08,23;UBERON:0005058,5.24e-08,23;UBERON:0003351,5.24e-08,23;UBERON:0009113,5.24e-08,23;UBERON:0003295,5.24e-08,23;UBERON:0009722,5.24e-08,23;UBERON:0005562,5.24e-08,23;UBERON:0007690,5.24e-08,23;UBERON:0006562,1.42e-07,24;UBERON:0003408,1.42e-07,24;UBERON:0001557,1.42e-07,24;UBERON:0001042,1.42e-07,24;UBERON:0008814,1.42e-07,24;UBERON:0009145,1.42e-07,24;UBERON:0007811,3.15e-07,36|phase1_expression=0.320297694209588,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,9.94249590500137,4.22366166455,5.14941957908386,0.856089841127525,1.11681022593471,16.0928686135333,12.0640155338216,0.333109761815663,1.01237633694913,0,4.25873923233621,2.74228867211478,1.27316895539409,0.255129870453209,0.496454756004426,0,0.799962113967033,0,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,5.02237956884289,1.5626706890476,2.09409497589519,13.5293242247133,8.19654581950135,1.45653105909346,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,8.55691290894455,5.07753499407941,9.41062637598899,0,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,1.21161909333094,1.43585964202892,2.31891590961342,0,2.03991400112325,1.07940638327563,1.29955283489534,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0.520455980298408,0,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,0,0,0,0.647067399789637,0.441683036920787,0,0,1.17112318804619,2.51336048176146,0,2.39630249011841,0,2.03312363316904,0.149790639404823,0,0.628271760564322,0.173824320192276,0,0,0.162241263067758,0.509196819251581,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.90502197623718,1.92170580427275,1.03071897015702,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0,0.823128545631774,0.59710280045548,0,0.257347907114715,1.13665399758237,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.817357396570186,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,1.78348749452539,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.678980343100753,0.938760993154008,0,0,0.585400943573396,0.315270288212382,1.7717175171902,0.478364305972461,0.491589944147214,0.863424909329478,0.289298117163023,3.01582567878545,2.17562273527484,0,0,0,0,0.163934945376675,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.6046471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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:96084020..96084029,+ | |||
|id=chr10:96084020..96084029,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.75e-07!9;CL:0000789!3.75e-07!9;CL:0002420!3.75e-07!9;CL:0002419!3.75e-07!9;CL:0000790!3.75e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.92e-16,32;CL:0002032,2.92e-16,32;CL:0000037,2.92e-16,32;CL:0000837,2.92e-16,32;CL:0002320,1.65e-15,46;CL:0000134,1.65e-15,46;CL:0002031,3.58e-15,25;CL:0000219,5.20e-15,54;CL:0000791,2.45e-14,9;CL:0000789,2.45e-14,9;CL:0002420,2.45e-14,9;CL:0002419,2.45e-14,9;CL:0000790,2.45e-14,9;CL:0000838,3.38e-13,12;CL:0000738,4.11e-13,17;CL:0002087,4.11e-13,17;CL:0000624,2.05e-12,8;CL:0000542,5.05e-12,13;CL:0000051,5.05e-12,13;CL:0000084,2.03e-11,11;CL:0000827,2.03e-11,11;CL:0000034,5.19e-09,97;CL:0000893,1.12e-08,6;CL:0002489,1.12e-08,6;CL:0000898,1.12e-08,6;CL:0000809,1.12e-08,6;CL:0000810,1.12e-08,6;CL:0000895,1.12e-08,6;CL:0000808,1.12e-08,6;CL:0000894,1.12e-08,6;CL:0000806,1.12e-08,6;CL:0000807,1.12e-08,6;CL:0000805,1.12e-08,6;CL:0002425,1.12e-08,6;CL:0002436,1.12e-08,6;CL:0002427,1.12e-08,6;CL:0002428,1.12e-08,6;CL:0002429,1.12e-08,6;CL:0002433,1.12e-08,6;CL:0002431,1.12e-08,6;CL:0002432,1.12e-08,6;CL:0000723,1.99e-07,91;CL:0000048,1.99e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.65e-15,46;UBERON:0002390,1.85e-09,45;UBERON:0003061,1.85e-09,45;UBERON:0002193,1.35e-08,48;UBERON:0002405,1.35e-08,48;UBERON:0002370,5.24e-08,23;UBERON:0000974,5.24e-08,23;UBERON:0004807,5.24e-08,23;UBERON:0005058,5.24e-08,23;UBERON:0003351,5.24e-08,23;UBERON:0009113,5.24e-08,23;UBERON:0003295,5.24e-08,23;UBERON:0009722,5.24e-08,23;UBERON:0005562,5.24e-08,23;UBERON:0007690,5.24e-08,23;UBERON:0006562,1.42e-07,24;UBERON:0003408,1.42e-07,24;UBERON:0001557,1.42e-07,24;UBERON:0001042,1.42e-07,24;UBERON:0008814,1.42e-07,24;UBERON:0009145,1.42e-07,24;UBERON:0007811,3.15e-07,36 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,1.00179145989269,0.16787927191189,0.467225281191051,9.94249590500137,4.22366166455,5.14941957908386,0.856089841127525,1.11681022593471,16.0928686135333,12.0640155338216,0.333109761815663,1.01237633694913,0,4.25873923233621,2.74228867211478,1.27316895539409,0.255129870453209,0.496454756004426,0,0.799962113967033,0,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0,0,0,0,0.577703239502549,0.166234645358492,0.816677425049476,5.02237956884289,1.5626706890476,2.09409497589519,13.5293242247133,8.19654581950135,1.45653105909346,0.251793635951155,0.405507724878058,0.183546752161682,0,0,0,0,0,0,8.55691290894455,5.07753499407941,9.41062637598899,0,0.573066879877513,0,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,0,0.270011876663381,0.210324961351382,0,0,0.122490799214954,0,0,0,0.127687338085188,0,0.395658863190582,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,1.21161909333094,1.43585964202892,2.31891590961342,0,2.03991400112325,1.07940638327563,1.29955283489534,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0.505524445014783,0.5709193985953,0.258937883647172,0,0.520455980298408,0,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,0,0,0,0.647067399789637,0.441683036920787,0,0,1.17112318804619,2.51336048176146,0,2.39630249011841,0,2.03312363316904,0.149790639404823,0,0.628271760564322,0.173824320192276,0,0,0.162241263067758,0.509196819251581,0.248813941220186,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0.753524089178575,1.90502197623718,1.92170580427275,1.03071897015702,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0,0.823128545631774,0.59710280045548,0,0.257347907114715,1.13665399758237,0,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.817357396570186,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.949058123089023,0.329397909448022,0.251335208800269,0,0,0,0.216138049874694,0.995706366271836,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,0.350679099451593,0.252946148497029,0.295220295959204,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,1.78348749452539,0.274561413188081,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0.678980343100753,0.938760993154008,0,0,0.585400943573396,0.315270288212382,1.7717175171902,0.478364305972461,0.491589944147214,0.863424909329478,0.289298117163023,3.01582567878545,2.17562273527484,0,0,0,0,0.163934945376675,0.757412781613119,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0.891844088010353,0.658196082408484,0.608929898229199,0.23467170806371,0,0,0.32977250588296,2.9063596805263,0.301564624640779,0.358117032009409,0.328281799490123,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.457556346413045,1.5298058699447,1.81936888020755,1.79659965945751,0,0,0.203319467126849,0.324016022465404,0.836353184057875,0.436725127492355,0.539457385539283,0.495920734352016,0.26175594198403,0.648074866458964,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0,0.506868376472335,0.58678619322877,0.2604087696879,0,0.241584120826006,0.864090018773596,0.632022241256357,0.405450430580328,0.513554785824136,0.389762468933385,0,0.993406773906324,1.68273629327956,2.21534290761866,1.21159739937777,1.5241361331,0.504130925684203,0.974578807397524,2.21287235772758,1.75315353272353,0,0,0.0897138566094757,0,0.386379188064381,0.750729901804728,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.962757628775446,0.252697211763798,0.760437899670719,0.377252682772152,0.280924522409647,0.128050304809739,0.459483751644906,0.952587382566147,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.581385666529314,0.282328141245992,0.592302255241736,0.182927972872773,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | |||
|short_description=p@chr10:96084020..96084029,+ | |||
}} |
Revision as of 18:05, 12 September 2013
Short description: | p@chr10:96084020..96084029, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96084020..96084029, + |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.65e-15 | 46 |
hematopoietic system | 1.85e-09 | 45 |
blood island | 1.85e-09 | 45 |
hemolymphoid system | 1.35e-08 | 48 |
immune system | 1.35e-08 | 48 |
thymus | 5.24e-08 | 23 |
neck | 5.24e-08 | 23 |
respiratory system epithelium | 5.24e-08 | 23 |
hemolymphoid system gland | 5.24e-08 | 23 |
pharyngeal epithelium | 5.24e-08 | 23 |
thymic region | 5.24e-08 | 23 |
pharyngeal gland | 5.24e-08 | 23 |
entire pharyngeal arch endoderm | 5.24e-08 | 23 |
thymus primordium | 5.24e-08 | 23 |
early pharyngeal endoderm | 5.24e-08 | 23 |
pharynx | 1.42e-07 | 24 |
gland of gut | 1.42e-07 | 24 |
upper respiratory tract | 1.42e-07 | 24 |
chordate pharynx | 1.42e-07 | 24 |
pharyngeal arch system | 1.42e-07 | 24 |
pharyngeal region of foregut | 1.42e-07 | 24 |
craniocervical region | 3.15e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.