FFCP PHASE1:Mm9::chr11:22759684..22759713,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=53625|HGNC=|MCL_coexpression_id=894|UniProt=Q3TVJ9,Q9Z222|association_with_transcript=21bp_to_NM_016888,uc007ieh.2_5end|description=CAGE_peak_1_at_B3gnt2_5end|id=chr11:22759684..22759713,-|ontology_enrichment_celltype=CL:0000063!5.70e-09!66;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0000838!8.96e-08!12;CL:0002320!1.15e-07!46;CL:0000134!1.15e-07!46;CL:0000738!1.45e-07!17;CL:0002087!1.45e-07!17;CL:0000084!2.14e-07!11;CL:0000827!2.14e-07!11;CL:0002031!3.69e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,8.61e-08,32;CL:0002032,8.61e-08,32;CL:0000037,8.61e-08,32;CL:0000837,8.61e-08,32;CL:0000838,8.96e-08,12;CL:0002320,1.15e-07,46;CL:0000134,1.15e-07,46;CL:0000738,1.45e-07,17;CL:0002087,1.45e-07,17;CL:0000084,2.14e-07,11;CL:0000827,2.14e-07,11;CL:0002031,3.67e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.26e-16!70;UBERON:0003104!1.69e-15!131;UBERON:0009142!1.69e-15!131;UBERON:0002193!1.80e-15!48;UBERON:0002390!3.96e-15!45;UBERON:0003061!3.96e-15!45;UBERON:0000926!8.35e-13!193;UBERON:0004120!8.35e-13!193;UBERON:0006603!8.35e-13!193;UBERON:0000490!4.20e-12!66;UBERON:0004119!2.24e-11!130;UBERON:0000925!2.24e-11!130;UBERON:0006595!2.24e-11!130;UBERON:0005911!2.77e-11!69;UBERON:0001007!4.16e-11!128;UBERON:0001555!4.16e-11!128;UBERON:0007026!4.16e-11!128;UBERON:0004921!4.74e-11!126;UBERON:0004185!4.74e-11!126;UBERON:0003929!5.42e-11!55;UBERON:0005057!2.49e-10!51;UBERON:0004177!4.00e-10!29;UBERON:0003081!2.63e-09!88;UBERON:0002370!2.97e-09!23;UBERON:0000974!2.97e-09!23;UBERON:0004807!2.97e-09!23;UBERON:0005058!2.97e-09!23;UBERON:0003351!2.97e-09!23;UBERON:0009113!2.97e-09!23;UBERON:0003295!2.97e-09!23;UBERON:0009722!2.97e-09!23;UBERON:0005562!2.97e-09!23;UBERON:0007690!2.97e-09!23;UBERON:0003408!3.93e-09!24;UBERON:0000077!4.96e-09!97;UBERON:0006562!7.61e-09!24;UBERON:0001557!7.61e-09!24;UBERON:0001042!7.61e-09!24;UBERON:0008814!7.61e-09!24;UBERON:0009145!7.61e-09!24;UBERON:0002368!9.82e-09!60;UBERON:0000072!1.28e-08!27;UBERON:0002530!2.49e-08!65;UBERON:0000065!2.66e-08!41;UBERON:0001004!2.74e-08!42;UBERON:0001041!3.02e-08!92;UBERON:0002384!1.15e-07!46;UBERON:0002204!2.77e-07!32;UBERON:0009569!7.16e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.80e-15,48;UBERON:0002405,1.80e-15,48;UBERON:0002390,3.96e-15,45;UBERON:0003061,3.96e-15,45;UBERON:0004119,3.49e-13,118;UBERON:0000925,3.49e-13,118;UBERON:0006595,3.49e-13,118;UBERON:0001007,6.53e-13,116;UBERON:0001555,6.53e-13,116;UBERON:0007026,6.53e-13,116;UBERON:0004921,7.11e-13,114;UBERON:0000490,4.20e-12,66;UBERON:0005911,2.77e-11,69;UBERON:0000077,4.11e-11,35;UBERON:0003929,5.42e-11,55;UBERON:0001041,3.32e-10,80;UBERON:0004177,4.00e-10,29;UBERON:0005057,4.00e-10,29;UBERON:0002370,2.97e-09,23;UBERON:0000974,2.97e-09,23;UBERON:0004807,2.97e-09,23;UBERON:0005058,2.97e-09,23;UBERON:0003351,2.97e-09,23;UBERON:0009113,2.97e-09,23;UBERON:0003295,2.97e-09,23;UBERON:0009722,2.97e-09,23;UBERON:0005562,2.97e-09,23;UBERON:0007690,2.97e-09,23;UBERON:0003408,3.93e-09,24;UBERON:0003081,7.23e-09,87;UBERON:0006562,7.61e-09,24;UBERON:0001557,7.61e-09,24;UBERON:0001042,7.61e-09,24;UBERON:0008814,7.61e-09,24;UBERON:0009145,7.61e-09,24;UBERON:0002368,9.82e-09,60;UBERON:0000072,1.28e-08,27;UBERON:0002530,2.49e-08,65;UBERON:0000065,2.66e-08,41;UBERON:0001004,2.74e-08,42;UBERON:0000926,5.92e-08,120;UBERON:0004120,5.92e-08,120;UBERON:0006603,5.92e-08,120;UBERON:0003104,8.08e-08,61;UBERON:0009142,8.08e-08,61;UBERON:0002384,1.15e-07,46;UBERON:0002100,1.20e-07,90;UBERON:0002204,2.77e-07,32;UBERON:0009569,7.16e-07,66|phase1_expression=4.16387002472464,56.8829914452159,54.5999087267443,64.7273412196616,70.1254021924886,22.6637017081051,22.660426137766,89.8698331153371,356.617833210172,354.841821904142,131.495399597188,137.926062902937,52.2162226290177,50.6164130005995,24.650122374359,23.28465574983,11.1929900500503,80.4428521663506,89.5357251445474,68.7511235912809,19.9001298953503,50.241221307648,46.4935624667305,16.1592347021341,19.0409703285751,40.7704694521664,31.8763877157715,26.2874903876785,16.1519906537918,14.617747526076,10.6430645114546,11.4305521222734,4.92051830067656,0,12.9983228888074,14.1299448554718,17.5585646385637,104.21437605349,79.6962051414276,111.510557466419,118.822760582265,116.117732442936,128.174733200225,27.9490935905782,29.3993100536592,28.6332933372223,13.3006528539167,1.74420125104357,4.39372365468944,3.30530828426282,10.2190087786515,5.75010257459886,50.5025644233786,76.1630249111912,61.5051652430709,21.6097926270195,20.9169411155292,23.2052441524849,1.41621522601718,2.64495489636016,2.53532561402472,4.06613438482959,11.5608323494448,105.738216780564,73.1761108299561,91.6519348280469,29.0612107202853,21.5162250980071,2.59224030771194,2.16009501330705,2.73422449756797,4.57041575046086,4.8591079009355,2.08234358665422,0.479227355091182,1.83843757322004,9.91042928994498,10.214987046815,9.216391995374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12.8904158604543,12.0865661322817,8.41713407486608,12.6939469392866,12.3130602969454,12.6861623382604,11.6202630889474,12.346023102793,6.49507502638659,9.35726433781634,13.7517474590911,8.60797494309795,14.7796250810075,26.2010654251076|short_description=p1@B3gnt2}} | ||
|EntrezGene=53625 | |||
|HGNC= | |||
|MCL_coexpression_id=894 | |||
|UniProt=Q3TVJ9,Q9Z222 | |||
|association_with_transcript=21bp_to_NM_016888,uc007ieh.2_5end | |||
|description=CAGE_peak_1_at_B3gnt2_5end | |||
|id=chr11:22759684..22759713,- | |||
|ontology_enrichment_celltype=CL:0000063!5.70e-09!66;CL:0000988!8.65e-08!32;CL:0002032!8.65e-08!32;CL:0000037!8.65e-08!32;CL:0000566!8.65e-08!32;CL:0000837!8.65e-08!32;CL:0000838!8.96e-08!12;CL:0002320!1.15e-07!46;CL:0000134!1.15e-07!46;CL:0000738!1.45e-07!17;CL:0002087!1.45e-07!17;CL:0000084!2.14e-07!11;CL:0000827!2.14e-07!11;CL:0002031!3.69e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.61e-08,32;CL:0002032,8.61e-08,32;CL:0000037,8.61e-08,32;CL:0000837,8.61e-08,32;CL:0000838,8.96e-08,12;CL:0002320,1.15e-07,46;CL:0000134,1.15e-07,46;CL:0000738,1.45e-07,17;CL:0002087,1.45e-07,17;CL:0000084,2.14e-07,11;CL:0000827,2.14e-07,11;CL:0002031,3.67e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.26e-16!70;UBERON:0003104!1.69e-15!131;UBERON:0009142!1.69e-15!131;UBERON:0002193!1.80e-15!48;UBERON:0002390!3.96e-15!45;UBERON:0003061!3.96e-15!45;UBERON:0000926!8.35e-13!193;UBERON:0004120!8.35e-13!193;UBERON:0006603!8.35e-13!193;UBERON:0000490!4.20e-12!66;UBERON:0004119!2.24e-11!130;UBERON:0000925!2.24e-11!130;UBERON:0006595!2.24e-11!130;UBERON:0005911!2.77e-11!69;UBERON:0001007!4.16e-11!128;UBERON:0001555!4.16e-11!128;UBERON:0007026!4.16e-11!128;UBERON:0004921!4.74e-11!126;UBERON:0004185!4.74e-11!126;UBERON:0003929!5.42e-11!55;UBERON:0005057!2.49e-10!51;UBERON:0004177!4.00e-10!29;UBERON:0003081!2.63e-09!88;UBERON:0002370!2.97e-09!23;UBERON:0000974!2.97e-09!23;UBERON:0004807!2.97e-09!23;UBERON:0005058!2.97e-09!23;UBERON:0003351!2.97e-09!23;UBERON:0009113!2.97e-09!23;UBERON:0003295!2.97e-09!23;UBERON:0009722!2.97e-09!23;UBERON:0005562!2.97e-09!23;UBERON:0007690!2.97e-09!23;UBERON:0003408!3.93e-09!24;UBERON:0000077!4.96e-09!97;UBERON:0006562!7.61e-09!24;UBERON:0001557!7.61e-09!24;UBERON:0001042!7.61e-09!24;UBERON:0008814!7.61e-09!24;UBERON:0009145!7.61e-09!24;UBERON:0002368!9.82e-09!60;UBERON:0000072!1.28e-08!27;UBERON:0002530!2.49e-08!65;UBERON:0000065!2.66e-08!41;UBERON:0001004!2.74e-08!42;UBERON:0001041!3.02e-08!92;UBERON:0002384!1.15e-07!46;UBERON:0002204!2.77e-07!32;UBERON:0009569!7.16e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.80e-15,48;UBERON:0002405,1.80e-15,48;UBERON:0002390,3.96e-15,45;UBERON:0003061,3.96e-15,45;UBERON:0004119,3.49e-13,118;UBERON:0000925,3.49e-13,118;UBERON:0006595,3.49e-13,118;UBERON:0001007,6.53e-13,116;UBERON:0001555,6.53e-13,116;UBERON:0007026,6.53e-13,116;UBERON:0004921,7.11e-13,114;UBERON:0000490,4.20e-12,66;UBERON:0005911,2.77e-11,69;UBERON:0000077,4.11e-11,35;UBERON:0003929,5.42e-11,55;UBERON:0001041,3.32e-10,80;UBERON:0004177,4.00e-10,29;UBERON:0005057,4.00e-10,29;UBERON:0002370,2.97e-09,23;UBERON:0000974,2.97e-09,23;UBERON:0004807,2.97e-09,23;UBERON:0005058,2.97e-09,23;UBERON:0003351,2.97e-09,23;UBERON:0009113,2.97e-09,23;UBERON:0003295,2.97e-09,23;UBERON:0009722,2.97e-09,23;UBERON:0005562,2.97e-09,23;UBERON:0007690,2.97e-09,23;UBERON:0003408,3.93e-09,24;UBERON:0003081,7.23e-09,87;UBERON:0006562,7.61e-09,24;UBERON:0001557,7.61e-09,24;UBERON:0001042,7.61e-09,24;UBERON:0008814,7.61e-09,24;UBERON:0009145,7.61e-09,24;UBERON:0002368,9.82e-09,60;UBERON:0000072,1.28e-08,27;UBERON:0002530,2.49e-08,65;UBERON:0000065,2.66e-08,41;UBERON:0001004,2.74e-08,42;UBERON:0000926,5.92e-08,120;UBERON:0004120,5.92e-08,120;UBERON:0006603,5.92e-08,120;UBERON:0003104,8.08e-08,61;UBERON:0009142,8.08e-08,61;UBERON:0002384,1.15e-07,46;UBERON:0002100,1.20e-07,90;UBERON:0002204,2.77e-07,32;UBERON:0009569,7.16e-07,66 | |||
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| |||
|short_description=p1@B3gnt2 | |||
}} |
Revision as of 19:15, 12 September 2013
Short description: | p1@B3gnt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3gnt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:894 |
Association with transcript: | 21bp_to_NM_016888, uc007ieh.2_5end |
EntrezGene: | B3gnt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.61e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.61e-08 | 32 |
hematopoietic stem cell | 8.61e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.61e-08 | 32 |
lymphoid lineage restricted progenitor cell | 8.96e-08 | 12 |
connective tissue cell | 1.15e-07 | 46 |
mesenchymal cell | 1.15e-07 | 46 |
leukocyte | 1.45e-07 | 17 |
nongranular leukocyte | 1.45e-07 | 17 |
T cell | 2.14e-07 | 11 |
pro-T cell | 2.14e-07 | 11 |
hematopoietic lineage restricted progenitor cell | 3.67e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.