FFCP PHASE1:Mm9::chr11:69222930..69222947,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=7|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69222930..69222947,-|id=chr11:69222930..69222947,-|ontology_enrichment_celltype=CL:0000988!2.39e-08!32;CL:0002032!2.39e-08!32;CL:0000037!2.39e-08!32;CL:0000566!2.39e-08!32;CL:0000837!2.39e-08!32;CL:0000838!9.75e-08!12;CL:0000791!2.78e-07!9;CL:0000789!2.78e-07!9;CL:0002420!2.78e-07!9;CL:0002419!2.78e-07!9;CL:0000790!2.78e-07!9;CL:0000084!4.67e-07!11;CL:0000827!4.67e-07!11;CL:0000063!8.32e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,2.42e-12,32;CL:0002032,2.42e-12,32;CL:0000037,2.42e-12,32;CL:0000837,2.42e-12,32;CL:0000791,1.20e-09,9;CL:0000789,1.20e-09,9;CL:0002420,1.20e-09,9;CL:0002419,1.20e-09,9;CL:0000790,1.20e-09,9;CL:0000838,3.23e-09,12;CL:0000624,9.53e-09,8;CL:0002031,1.74e-08,25;CL:0000084,2.80e-08,11;CL:0000827,2.80e-08,11;CL:0000542,3.51e-08,13;CL:0000051,3.51e-08,13;CL:0002320,4.50e-08,46;CL:0000134,4.50e-08,46;CL:0000893,5.35e-07,6;CL:0002489,5.35e-07,6;CL:0000898,5.35e-07,6;CL:0000809,5.35e-07,6;CL:0000810,5.35e-07,6;CL:0000895,5.35e-07,6;CL:0000808,5.35e-07,6;CL:0000894,5.35e-07,6;CL:0000806,5.35e-07,6;CL:0000807,5.35e-07,6;CL:0000805,5.35e-07,6;CL:0002425,5.35e-07,6;CL:0002436,5.35e-07,6;CL:0002427,5.35e-07,6;CL:0002428,5.35e-07,6;CL:0002429,5.35e-07,6;CL:0002433,5.35e-07,6;CL:0002431,5.35e-07,6;CL:0002432,5.35e-07,6;CL:0000219,9.66e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-09,45;UBERON:0003061,1.05e-09,45;UBERON:0002193,1.71e-09,48;UBERON:0002405,1.71e-09,48;UBERON:0006562,2.16e-08,24;UBERON:0001557,2.16e-08,24;UBERON:0001042,2.16e-08,24;UBERON:0008814,2.16e-08,24;UBERON:0009145,2.16e-08,24;UBERON:0000072,2.96e-08,27;UBERON:0003081,3.64e-08,87;UBERON:0004177,3.77e-08,29;UBERON:0005057,3.77e-08,29;UBERON:0002384,4.50e-08,46;UBERON:0002370,5.73e-08,23;UBERON:0000974,5.73e-08,23;UBERON:0004807,5.73e-08,23;UBERON:0005058,5.73e-08,23;UBERON:0003351,5.73e-08,23;UBERON:0009113,5.73e-08,23;UBERON:0003295,5.73e-08,23;UBERON:0009722,5.73e-08,23;UBERON:0005562,5.73e-08,23;UBERON:0007690,5.73e-08,23;UBERON:0000077,2.07e-07,35;UBERON:0003408,2.18e-07,24|phase1_expression=1.12104192973356,6.2815573375085,5.91499011206397,2.72217790176147,3.00537437967808,5.20425742926858,3.50418960893289,17.9481419583791,409.132026572744,482.875117802273,114.544820742863,101.629730560059,12.8400547448404,17.9211824958945,0.999329285446988,2.22722794128809,0,7.5710919685977,6.17014951225825,8.91218268775863,1.78590909317247,0.992909512008853,1.04479915655574,0.47997726838022,0.22940928106717,2.8711598205751,4.73838195774982,3.44753972297422,0.380046838912748,0.252030129759931,0.665191531965914,3.81018404075779,6.1506478758457,0,1.1554064790051,0.831173226792462,1.42918549383658,0.837063261473815,0.7813353445238,1.0470474879476,4.70585190424811,3.41522742479223,0.485510353031154,0.125896817975577,0.202753862439029,0.183546752161682,0,0.218025156380447,0,0.194429899074283,0,0,130.367084906861,100.825337739577,84.023449785616,1.54355661621568,0.286533439938757,0.515672092277442,0.202316460859598,0,0,1.0165335962074,0,0.449949858640699,2.96659908770092,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0.383381884072945,0,1.10115880999389,0.383062014255563,0.46081959976873,0.131886287730194,0,0,0,0.56276261003168,1.06958773443767,0,0.142371680799103,0,5.52801211332244,1.058001841495,18.8411917656091,0.860423876981386,0.679971333707751,0,0,0.448026887097336,2.66844398250329,0,0,0,2.11265129665021,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,1.25602267690966,23.3044095282455,3.56261133755579,0.520455980298408,1.21786191324856,0.922461989024234,0.452167921657868,1.76383060703557,0.753999547978053,0.247194967734374,7.95296463059514,3.5384422077995,0.970601099684455,3.3126227769059,1.45462575940567,0,1.46390398505774,0.628340120440365,0.510914110417183,72.128704952564,37.7938720525847,32.2758376765584,0.299581278809645,1.37250180845588,0.251308704225729,0.695297280769106,0.767146371990992,0.83115217823824,0.486723789203273,0.509196819251581,1.36847667671102,0.505445516867349,0.841767423545896,0.260240885925407,0.229902104433473,0.180062129805349,0.150704817835715,0.340182495756639,0.768682321709099,0.468508622798644,0.776110112217047,0.215567992932842,0.378212160335639,1.05570674498369,1.31517439456545,0.278047249225598,1.39300866608867,1.02891068203972,0.199034266818493,18.2575428701441,15.6982223339976,14.4923384691752,0.828503090142008,0.234526059981096,0.720248245844059,0.710234206755631,0.983821158737019,0.771335564436891,0.930135779001631,1.3413670069981,0.934122738937356,1.48103864922132,2.62667942526552,1.78351381000883,2.63159977365598,1.97595103761946,2.01309628140558,1.68231958851302,0.205809224758569,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.80673409849337,0.889512175379481,0.190225626112559,0.474529061544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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69222930..69222947,- | |||
|id=chr11:69222930..69222947,- | |||
|ontology_enrichment_celltype=CL:0000988!2.39e-08!32;CL:0002032!2.39e-08!32;CL:0000037!2.39e-08!32;CL:0000566!2.39e-08!32;CL:0000837!2.39e-08!32;CL:0000838!9.75e-08!12;CL:0000791!2.78e-07!9;CL:0000789!2.78e-07!9;CL:0002420!2.78e-07!9;CL:0002419!2.78e-07!9;CL:0000790!2.78e-07!9;CL:0000084!4.67e-07!11;CL:0000827!4.67e-07!11;CL:0000063!8.32e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.42e-12,32;CL:0002032,2.42e-12,32;CL:0000037,2.42e-12,32;CL:0000837,2.42e-12,32;CL:0000791,1.20e-09,9;CL:0000789,1.20e-09,9;CL:0002420,1.20e-09,9;CL:0002419,1.20e-09,9;CL:0000790,1.20e-09,9;CL:0000838,3.23e-09,12;CL:0000624,9.53e-09,8;CL:0002031,1.74e-08,25;CL:0000084,2.80e-08,11;CL:0000827,2.80e-08,11;CL:0000542,3.51e-08,13;CL:0000051,3.51e-08,13;CL:0002320,4.50e-08,46;CL:0000134,4.50e-08,46;CL:0000893,5.35e-07,6;CL:0002489,5.35e-07,6;CL:0000898,5.35e-07,6;CL:0000809,5.35e-07,6;CL:0000810,5.35e-07,6;CL:0000895,5.35e-07,6;CL:0000808,5.35e-07,6;CL:0000894,5.35e-07,6;CL:0000806,5.35e-07,6;CL:0000807,5.35e-07,6;CL:0000805,5.35e-07,6;CL:0002425,5.35e-07,6;CL:0002436,5.35e-07,6;CL:0002427,5.35e-07,6;CL:0002428,5.35e-07,6;CL:0002429,5.35e-07,6;CL:0002433,5.35e-07,6;CL:0002431,5.35e-07,6;CL:0002432,5.35e-07,6;CL:0000219,9.66e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-09,45;UBERON:0003061,1.05e-09,45;UBERON:0002193,1.71e-09,48;UBERON:0002405,1.71e-09,48;UBERON:0006562,2.16e-08,24;UBERON:0001557,2.16e-08,24;UBERON:0001042,2.16e-08,24;UBERON:0008814,2.16e-08,24;UBERON:0009145,2.16e-08,24;UBERON:0000072,2.96e-08,27;UBERON:0003081,3.64e-08,87;UBERON:0004177,3.77e-08,29;UBERON:0005057,3.77e-08,29;UBERON:0002384,4.50e-08,46;UBERON:0002370,5.73e-08,23;UBERON:0000974,5.73e-08,23;UBERON:0004807,5.73e-08,23;UBERON:0005058,5.73e-08,23;UBERON:0003351,5.73e-08,23;UBERON:0009113,5.73e-08,23;UBERON:0003295,5.73e-08,23;UBERON:0009722,5.73e-08,23;UBERON:0005562,5.73e-08,23;UBERON:0007690,5.73e-08,23;UBERON:0000077,2.07e-07,35;UBERON:0003408,2.18e-07,24 | |||
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| |||
|short_description=p@chr11:69222930..69222947,- | |||
}} |
Revision as of 20:35, 12 September 2013
Short description: | p@chr11:69222930..69222947, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69222930..69222947, - |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-09 | 45 |
blood island | 1.05e-09 | 45 |
hemolymphoid system | 1.71e-09 | 48 |
immune system | 1.71e-09 | 48 |
pharynx | 2.16e-08 | 24 |
upper respiratory tract | 2.16e-08 | 24 |
chordate pharynx | 2.16e-08 | 24 |
pharyngeal arch system | 2.16e-08 | 24 |
pharyngeal region of foregut | 2.16e-08 | 24 |
segment of respiratory tract | 2.96e-08 | 27 |
lateral plate mesoderm | 3.64e-08 | 87 |
hemopoietic organ | 3.77e-08 | 29 |
immune organ | 3.77e-08 | 29 |
connective tissue | 4.50e-08 | 46 |
thymus | 5.73e-08 | 23 |
neck | 5.73e-08 | 23 |
respiratory system epithelium | 5.73e-08 | 23 |
hemolymphoid system gland | 5.73e-08 | 23 |
pharyngeal epithelium | 5.73e-08 | 23 |
thymic region | 5.73e-08 | 23 |
pharyngeal gland | 5.73e-08 | 23 |
entire pharyngeal arch endoderm | 5.73e-08 | 23 |
thymus primordium | 5.73e-08 | 23 |
early pharyngeal endoderm | 5.73e-08 | 23 |
mixed endoderm/mesoderm-derived structure | 2.07e-07 | 35 |
gland of gut | 2.18e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.