FFCP PHASE1:Mm9::chr12:31949852..31949867,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16777|HGNC=|UniProt=P02469|association_with_transcript=-231bp_to_ENSMUST00000169088_5end|description=CAGE_peak_5_at_Lamb1_5end|id=chr12:31949852..31949867,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,8.53e-15,3;CL:0000351,8.53e-15,3;CL:0000068,3.29e-14,3;CL:0002202,3.29e-14,3;CL:0000069,3.29e-14,3;CL:0002632,3.29e-14,3;CL:0002368,3.29e-14,3;CL:0000307,3.29e-14,3;CL:0000377,3.29e-14,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0006554,3.45e-19,18;UBERON:0001008,4.10e-18,19;UBERON:0002113,4.50e-15,14;UBERON:0003918,4.50e-15,14;UBERON:0011143,4.50e-15,14;UBERON:0005095,4.50e-15,14;UBERON:0007687,4.50e-15,14;UBERON:0000358,8.53e-15,3;UBERON:0000307,8.53e-15,3;UBERON:0007010,8.53e-15,3;UBERON:0003126,3.29e-14,3;UBERON:0001005,3.29e-14,3;UBERON:0007196,3.29e-14,3;UBERON:0001558,3.29e-14,3;UBERON:0001987,2.77e-10,2;UBERON:0003124,2.77e-10,2;UBERON:0004340,2.77e-10,2;UBERON:0000489,8.46e-10,21;UBERON:0003103,5.28e-09,43;UBERON:0005631,3.97e-07,3;UBERON:0000478,3.97e-07,3;UBERON:0000158,3.97e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,3.030874574157,4.05375784760158,1.01104889002957,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0.691846491768175,0.452167921657868,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0.720248519221397,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0.703804496655795,0.43839146485515,0.278047249225598,1.0447564995665,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.644337306610467,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,1.51734320762465,0.456994050438915,3.38123207019241,2.03651327845314,2.13347735884388,3.22624771495465,2.71917109634306,0.738050739898011,1.41298855057237,0.616985819609003,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.848725428875941,0.469380496577004,0.502518772325447,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,2.58138878870081,3.60114520468494,0,0.49465875882444,0.484393280087717,0.180938774784468,0.835606408021955,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.21991680276109,0.972048067396211,0.627264888043406,0,0.674321731924103,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,1.05621514781179,0.13020438484395,0.209718688851422,0,0,0,0,0,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,2.66383144048878,3.40912655116008,3.8613461763738,0.19318959403219,0.563047426353546,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0|short_description=p5@Lamb1}} | ||
|EntrezGene=16777 | |||
|HGNC= | |||
|UniProt=P02469 | |||
|association_with_transcript=-231bp_to_ENSMUST00000169088_5end | |||
|description=CAGE_peak_5_at_Lamb1_5end | |||
|id=chr12:31949852..31949867,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,8.53e-15,3;CL:0000351,8.53e-15,3;CL:0000068,3.29e-14,3;CL:0002202,3.29e-14,3;CL:0000069,3.29e-14,3;CL:0002632,3.29e-14,3;CL:0002368,3.29e-14,3;CL:0000307,3.29e-14,3;CL:0000377,3.29e-14,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,3.45e-19,18;UBERON:0001008,4.10e-18,19;UBERON:0002113,4.50e-15,14;UBERON:0003918,4.50e-15,14;UBERON:0011143,4.50e-15,14;UBERON:0005095,4.50e-15,14;UBERON:0007687,4.50e-15,14;UBERON:0000358,8.53e-15,3;UBERON:0000307,8.53e-15,3;UBERON:0007010,8.53e-15,3;UBERON:0003126,3.29e-14,3;UBERON:0001005,3.29e-14,3;UBERON:0007196,3.29e-14,3;UBERON:0001558,3.29e-14,3;UBERON:0001987,2.77e-10,2;UBERON:0003124,2.77e-10,2;UBERON:0004340,2.77e-10,2;UBERON:0000489,8.46e-10,21;UBERON:0003103,5.28e-09,43;UBERON:0005631,3.97e-07,3;UBERON:0000478,3.97e-07,3;UBERON:0000158,3.97e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0.183546752161682,0,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,1.0165335962074,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0,0.422530259330042,0,0,0,3.030874574157,4.05375784760158,1.01104889002957,0,0.258937883647172,0.148442139064825,0.346970653532272,0,0.691846491768175,0.452167921657868,0.117588707135705,0.125666591329675,0.988779870937496,0,0,0,0,0,0,0,0.41889341362691,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0.720248519221397,0.452114453507145,0.0680364991513279,0.12811372028485,0.281105173679186,0.258703370739016,0.646703978798527,0.567318240503458,0.703804496655795,0.43839146485515,0.278047249225598,1.0447564995665,0,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0,0.23674473558521,0.393528463494808,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.644337306610467,0,0,0.380451252225118,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,1.51734320762465,0.456994050438915,3.38123207019241,2.03651327845314,2.13347735884388,3.22624771495465,2.71917109634306,0.738050739898011,1.41298855057237,0.616985819609003,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.37898282354097,0.977789858652155,0.848725428875941,0.469380496577004,0.502518772325447,0.238043640886014,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0.283880170416537,0.534196811001766,0,0.164970122972535,0,0.728341908464944,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.214337035031592,0.354680467284547,0.178368817602071,0.329098041204242,0,2.58138878870081,3.60114520468494,0,0.49465875882444,0.484393280087717,0.180938774784468,0.835606408021955,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,1.21991680276109,0.972048067396211,0.627264888043406,0,0.674321731924103,0.41326727862668,0,0,0,0,0.149516546043979,0.165458490457098,0,0.387479470433193,0.337912250981556,1.05621514781179,0.13020438484395,0.209718688851422,0,0,0,0,0,0.389762468933385,0.358053391334963,0.198681354781265,0,0,0,0,0,0.0974578807397524,0,0,0,2.66383144048878,3.40912655116008,3.8613461763738,0.19318959403219,0.563047426353546,0.549454872801795,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,1.02860775715625,0.177475806159338,0,0.290692833264657,0,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0.578719832943424,0.249810577937946,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p5@Lamb1 | |||
}} |
Revision as of 22:42, 12 September 2013
Short description: | p5@Lamb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lamb1_5end |
Coexpression cluster: | NA |
Association with transcript: | -231bp_to_ENSMUST00000169088_5end |
EntrezGene: | Lamb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 8.53e-15 | 3 |
trophoblast cell | 8.53e-15 | 3 |
duct epithelial cell | 3.29e-14 | 3 |
epithelial cell of tracheobronchial tree | 3.29e-14 | 3 |
branched duct epithelial cell | 3.29e-14 | 3 |
epithelial cell of lower respiratory tract | 3.29e-14 | 3 |
respiratory epithelial cell | 3.29e-14 | 3 |
tracheal epithelial cell | 3.29e-14 | 3 |
tracheoblast | 3.29e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 3.45e-19 | 18 |
renal system | 4.10e-18 | 19 |
kidney | 4.50e-15 | 14 |
kidney mesenchyme | 4.50e-15 | 14 |
upper urinary tract | 4.50e-15 | 14 |
kidney rudiment | 4.50e-15 | 14 |
kidney field | 4.50e-15 | 14 |
blastocyst | 8.53e-15 | 3 |
blastula | 8.53e-15 | 3 |
cleaving embryo | 8.53e-15 | 3 |
trachea | 3.29e-14 | 3 |
respiratory airway | 3.29e-14 | 3 |
tracheobronchial tree | 3.29e-14 | 3 |
lower respiratory tract | 3.29e-14 | 3 |
placenta | 2.77e-10 | 2 |
chorion | 2.77e-10 | 2 |
allantois | 2.77e-10 | 2 |
cavitated compound organ | 8.46e-10 | 21 |
compound organ | 5.28e-09 | 43 |
extraembryonic membrane | 3.97e-07 | 3 |
extraembryonic structure | 3.97e-07 | 3 |
membranous layer | 3.97e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.