FFCP PHASE1:Mm9::chr13:75902566..75902572,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:75902566..75902572,+|id=chr13:75902566..75902572,+|ontology_enrichment_celltype=CL:0000548!4.92e-08!115;CL:0000004!4.92e-08!115;CL:0000255!4.92e-08!115;CL:0000144!1.33e-07!121;CL:0000012!1.33e-07!121;CL:0002371!2.47e-07!118|ontology_enrichment_celltype_v019_2=CL:0002293,5.96e-12,3;CL:0000192,2.57e-11,3;CL:0000359,2.57e-11,3;CL:0002539,2.57e-11,3;CL:0000514,2.57e-11,3;CL:0002476,1.77e-08,2;CL:0000223,6.79e-08,20;CL:0000066,6.85e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.57e-11,3;UBERON:0004237,2.57e-11,3;UBERON:0004695,2.57e-11,3;UBERON:0002111,2.57e-11,3;UBERON:0004178,2.57e-11,3;UBERON:0000947,1.35e-08,4;UBERON:0001637,1.35e-08,4;UBERON:0004573,1.35e-08,4;UBERON:0003509,1.35e-08,4;UBERON:0004571,1.35e-08,4;UBERON:0010191,1.35e-08,4;UBERON:0004572,1.35e-08,4;UBERON:0000055,5.89e-07,5;UBERON:0007500,5.89e-07,5;UBERON:0001981,5.89e-07,5;UBERON:0002049,5.89e-07,5;UBERON:0007798,5.89e-07,5;UBERON:0004537,5.89e-07,5;UBERON:0006965,5.89e-07,5|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,0,1.16806320297763,0.387369970324729,0,1.87251621057595,0,0.319088635981346,0,0,0.333109761815663,0,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0.765389611359628,0.0992909512008853,0,0.799962113967033,1.83527424853736,0,0.430761996159075,0,0.760093677825496,0.252030129759931,0.665191531965914,0,0.61506478758457,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,2.01434908760924,1.52065396829272,4.77221555620372,0,0.436050312760893,0,0,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0.766124028511126,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0.832988126665025,0.453429360640713,0.289864488701678,0,3.39985666853875,2.69851595818909,0,0,1.12355536105401,1.1930122580464,1.81850203222008,1.7666978725517,1.40843419776681,6.41632387071589,2.54805239706646,7.11066703153331,0,0,0,2.8545969929765,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,0.420579897128254,0,0,1.58670339998127,0.426576501070468,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,6.03165135757089,3.26343410291226,0,0,0,0,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0,0,0.283076530788832,0.809621403349789,1.46127928955656,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.753473828018764,0.410082683163076,0.228778173206523,0.339956859987711,0,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.62799699626633,0,0,0.187682475451182,0,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0,0.409231043169689,0.464810523557898,0,0,0,0,0.191288332068843,0,0.463735671240843|short_description=p@chr13:75902566..75902572,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:75902566..75902572,+ | |||
|id=chr13:75902566..75902572,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.92e-08!115;CL:0000004!4.92e-08!115;CL:0000255!4.92e-08!115;CL:0000144!1.33e-07!121;CL:0000012!1.33e-07!121;CL:0002371!2.47e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,5.96e-12,3;CL:0000192,2.57e-11,3;CL:0000359,2.57e-11,3;CL:0002539,2.57e-11,3;CL:0000514,2.57e-11,3;CL:0002476,1.77e-08,2;CL:0000223,6.79e-08,20;CL:0000066,6.85e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.57e-11,3;UBERON:0004237,2.57e-11,3;UBERON:0004695,2.57e-11,3;UBERON:0002111,2.57e-11,3;UBERON:0004178,2.57e-11,3;UBERON:0000947,1.35e-08,4;UBERON:0001637,1.35e-08,4;UBERON:0004573,1.35e-08,4;UBERON:0003509,1.35e-08,4;UBERON:0004571,1.35e-08,4;UBERON:0010191,1.35e-08,4;UBERON:0004572,1.35e-08,4;UBERON:0000055,5.89e-07,5;UBERON:0007500,5.89e-07,5;UBERON:0001981,5.89e-07,5;UBERON:0002049,5.89e-07,5;UBERON:0007798,5.89e-07,5;UBERON:0004537,5.89e-07,5;UBERON:0006965,5.89e-07,5 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,0,1.16806320297763,0.387369970324729,0,1.87251621057595,0,0.319088635981346,0,0,0.333109761815663,0,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0.765389611359628,0.0992909512008853,0,0.799962113967033,1.83527424853736,0,0.430761996159075,0,0.760093677825496,0.252030129759931,0.665191531965914,0,0.61506478758457,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,2.01434908760924,1.52065396829272,4.77221555620372,0,0.436050312760893,0,0,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0.7104801149461,0.599200221036809,0,0.103689612308478,0,0,0,0,0,0,0,0,0.766124028511126,0.307213066512487,0,0,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.284743361598206,0,0.832988126665025,0.453429360640713,0.289864488701678,0,3.39985666853875,2.69851595818909,0,0,1.12355536105401,1.1930122580464,1.81850203222008,1.7666978725517,1.40843419776681,6.41632387071589,2.54805239706646,7.11066703153331,0,0,0,2.8545969929765,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0.20778804455956,0,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0,0,0,0,0,0.187403449119458,0.258703370739016,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0,0,0,0.420579897128254,0,0,1.58670339998127,0.426576501070468,0,0,0,0.22237804384487,0,0,0.164698954724011,0.251335208800269,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0,0.358794827043824,0.482443521363367,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0.172684981865896,0,6.03165135757089,3.26343410291226,0,0,0,0,0,0,0.94652465824877,0.780877488593277,1.07711698866399,0,0,0.283076530788832,0.809621403349789,1.46127928955656,0.395287777946524,0,0,0,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.484393280087717,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.341741761595705,0.206386867963223,0.370389054739423,0.753473828018764,0.410082683163076,0.228778173206523,0.339956859987711,0,0.276399947608848,0,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0.62799699626633,0,0,0.187682475451182,0,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0,0,0.0574354689556133,0,0.231768651889711,0,0,0.147198920134397,0,0.354951612318675,0,0,0.188218760830661,0.169229215783353,0.182927972872773,0,0,0,0,0,0.409231043169689,0.464810523557898,0,0,0,0,0.191288332068843,0,0.463735671240843 | |||
|short_description=p@chr13:75902566..75902572,+ | |||
}} |
Revision as of 01:07, 13 September 2013
Short description: | p@chr13:75902566..75902572, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:75902566..75902572, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 5.96e-12 | 3 |
smooth muscle cell | 2.57e-11 | 3 |
vascular associated smooth muscle cell | 2.57e-11 | 3 |
aortic smooth muscle cell | 2.57e-11 | 3 |
smooth muscle myoblast | 2.57e-11 | 3 |
bone marrow macrophage | 1.77e-08 | 2 |
endodermal cell | 6.79e-08 | 20 |
epithelial cell | 6.85e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 2.57e-11 | 3 |
blood vessel smooth muscle | 2.57e-11 | 3 |
arterial system smooth muscle | 2.57e-11 | 3 |
artery smooth muscle tissue | 2.57e-11 | 3 |
aorta smooth muscle tissue | 2.57e-11 | 3 |
aorta | 1.35e-08 | 4 |
artery | 1.35e-08 | 4 |
systemic artery | 1.35e-08 | 4 |
arterial blood vessel | 1.35e-08 | 4 |
systemic arterial system | 1.35e-08 | 4 |
aortic system | 1.35e-08 | 4 |
arterial system | 1.35e-08 | 4 |
vessel | 5.89e-07 | 5 |
epithelial tube open at both ends | 5.89e-07 | 5 |
blood vessel | 5.89e-07 | 5 |
vasculature | 5.89e-07 | 5 |
vascular system | 5.89e-07 | 5 |
blood vasculature | 5.89e-07 | 5 |
vascular cord | 5.89e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.