FFCP PHASE1:Hg19::chr3:69101387..69101411,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7110 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11870 | |||
|TSSclassifier=S | |||
|UniProt=F8WF45 | |||
|association_with_transcript=29bp_to_ENST00000488010_5end | |||
|description=CAGE_peak_3_at_TMF1_5end | |||
|id=chr3:69101387..69101411,- | |||
|ontology_enrichment_celltype=CL:0000738!8.61e-14!140;CL:0000766!4.16e-13!76;CL:0000557!6.42e-12!71;CL:0002057!4.44e-11!42;CL:0000134!1.97e-10!358;CL:0000839!2.72e-10!70;CL:0002031!2.82e-10!124;CL:0002320!2.87e-10!365;CL:0002009!2.02e-09!65;CL:0000860!3.70e-09!45;CL:0002194!1.05e-08!63;CL:0000576!1.05e-08!63;CL:0000040!1.05e-08!63;CL:0000559!1.05e-08!63;CL:0000048!1.14e-08!430;CL:0002087!1.23e-08!119;CL:0000723!3.23e-08!436;CL:0000034!5.88e-08!444;CL:0000219!8.23e-08!390;CL:0000037!2.31e-07!172;CL:0000566!2.31e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.40e-11;33!CL:0002057;3.40e-11;33!CL:0000473;7.57e-09;39!CL:0000234;7.57e-09;39!CL:0000576;2.13e-07;48!CL:0000766;2.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.54e-15,136;CL:0000766,1.29e-14,72;CL:0000557,2.15e-13,67;CL:0000839,1.27e-11,66;CL:0000134,2.05e-11,354;CL:0002320,2.99e-11,361;CL:0002031,3.58e-11,120;CL:0000860,4.39e-11,42;CL:0002057,4.39e-11,42;CL:0002009,9.89e-11,61;CL:0000473,1.72e-10,48;CL:0000234,1.72e-10,48;CL:0002194,5.79e-10,59;CL:0000576,5.79e-10,59;CL:0000040,5.79e-10,59;CL:0000559,5.79e-10,59;CL:0000048,9.63e-10,427;CL:0002087,1.96e-09,115;CL:0000723,2.84e-09,433;CL:0000034,5.69e-09,441;CL:0000219,1.32e-08,386;CL:0000037,6.35e-08,168 | |||
|ontology_enrichment_development_v019=CL:0002057;7.37e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.04e-11!102;UBERON:0003061!1.04e-11!102;UBERON:0002371!5.05e-11!80;UBERON:0004765!6.43e-11!101;UBERON:0001434!6.43e-11!101;UBERON:0002384!6.53e-11!375;UBERON:0001474!3.22e-10!86;UBERON:0002193!1.61e-09!112;UBERON:0002204!2.12e-08!167;UBERON:0002405!5.56e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.78e-13,98;UBERON:0003061,8.78e-13,98;UBERON:0002371,2.70e-12,76;UBERON:0001434,5.60e-12,100;UBERON:0002384,6.39e-12,371;UBERON:0004765,2.32e-11,90;UBERON:0001474,2.59e-11,82;UBERON:0002193,2.28e-10,108;UBERON:0002405,1.33e-09,93;UBERON:0002204,2.10e-09,167 | |||
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| |||
|short_description=p3@TMF1 | |||
}} |
Revision as of 01:14, 13 September 2013
Short description: | p3@TMF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000488010_5end |
EntrezGene: | TMF1 |
HGNC: | 11870 |
UniProt: | F8WF45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.54e-15 | 136 |
myeloid leukocyte | 1.29e-14 | 72 |
granulocyte monocyte progenitor cell | 2.15e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.27e-11 | 66 |
mesenchymal cell | 2.05e-11 | 354 |
connective tissue cell | 2.99e-11 | 361 |
hematopoietic lineage restricted progenitor cell | 3.58e-11 | 120 |
classical monocyte | 4.39e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.39e-11 | 42 |
macrophage dendritic cell progenitor | 9.89e-11 | 61 |
defensive cell | 1.72e-10 | 48 |
phagocyte | 1.72e-10 | 48 |
monopoietic cell | 5.79e-10 | 59 |
monocyte | 5.79e-10 | 59 |
monoblast | 5.79e-10 | 59 |
promonocyte | 5.79e-10 | 59 |
multi fate stem cell | 9.63e-10 | 427 |
nongranular leukocyte | 1.96e-09 | 115 |
somatic stem cell | 2.84e-09 | 433 |
stem cell | 5.69e-09 | 441 |
motile cell | 1.32e-08 | 386 |
hematopoietic stem cell | 6.35e-08 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.78e-13 | 98 |
blood island | 8.78e-13 | 98 |
bone marrow | 2.70e-12 | 76 |
skeletal system | 5.60e-12 | 100 |
connective tissue | 6.39e-12 | 371 |
skeletal element | 2.32e-11 | 90 |
bone element | 2.59e-11 | 82 |
hemolymphoid system | 2.28e-10 | 108 |
immune system | 1.33e-09 | 93 |
musculoskeletal system | 2.10e-09 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.