FFCP PHASE1:Hg19::chr4:110481374..110481458,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55013 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26076 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000515114_5end | |||
|coexpression_cluster_id=C3725 | |||
|description=CAGE_peak_1_at_CCDC109B_5end | |||
|id=chr4:110481374..110481458,+ | |||
|ontology_enrichment_celltype=CL:0002087!4.82e-41!119;CL:0002031!3.81e-38!124;CL:0000738!1.28e-36!140;CL:0000037!1.64e-27!172;CL:0000566!1.64e-27!172;CL:0002057!3.41e-26!42;CL:0002032!8.52e-25!165;CL:0000837!8.52e-25!165;CL:0000988!1.58e-24!182;CL:0000860!1.97e-23!45;CL:0000048!2.34e-23!430;CL:0000723!3.32e-23!436;CL:0000034!4.15e-22!444;CL:0000542!8.20e-20!53;CL:0000051!8.20e-20!53;CL:0000838!1.79e-19!52;CL:0002009!2.46e-19!65;CL:0002194!5.00e-19!63;CL:0000576!5.00e-19!63;CL:0000040!5.00e-19!63;CL:0000559!5.00e-19!63;CL:0000134!9.76e-19!358;CL:0000557!1.38e-18!71;CL:0000839!6.38e-18!70;CL:0002320!2.45e-17!365;CL:0000766!3.74e-16!76;CL:0000219!2.46e-15!390;CL:0002371!4.61e-15!591;CL:0000144!5.98e-13!625;CL:0000003!8.37e-12!722;CL:0000084!3.08e-11!25;CL:0000827!3.08e-11!25;CL:0000791!3.19e-11!18;CL:0000789!3.19e-11!18;CL:0002420!3.19e-11!18;CL:0002419!3.19e-11!18;CL:0000790!3.19e-11!18;CL:0000763!1.62e-08!112;CL:0000049!1.62e-08!112;CL:0000945!2.04e-08!24;CL:0000826!2.04e-08!24;CL:0000625!2.08e-07!11;CL:0000012!5.10e-07!682;CL:0000236!5.11e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.36e-20;33!CL:0002057;8.36e-20;33!CL:0000473;1.73e-17;39!CL:0000234;1.73e-17;39!CL:0000576;5.87e-15;48!CL:0002087;4.28e-13;104!CL:0000542;7.43e-12;53!CL:0000791;3.14e-11;18!CL:0000789;3.14e-11;18!CL:0002419;3.14e-11;18!CL:0000084;3.21e-11;25!CL:0000766;1.48e-09;69!CL:0000738;1.49e-08;136!CL:0000945;2.02e-08;24!CL:0000625;2.07e-07;11!CL:0000236;5.89e-07;13 | |||
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|ontology_enrichment_disease= | |||
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|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@CCDC109B | |||
}} |
Revision as of 02:01, 13 September 2013
Short description: | p1@CCDC109B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CCDC109B_5end |
Coexpression cluster: | C3725_CD14_CD4_CD8_Burkitt_CD19_Basophils_lymphoma |
Association with transcript: | 6bp_to_ENST00000515114_5end |
EntrezGene: | CCDC109B |
HGNC: | 26076 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.39e-27 | 108 |
hematopoietic system | 6.41e-26 | 98 |
blood island | 6.41e-26 | 98 |
immune system | 1.21e-24 | 93 |
bone marrow | 2.13e-21 | 76 |
lateral plate mesoderm | 1.04e-20 | 203 |
bone element | 9.31e-20 | 82 |
connective tissue | 1.52e-17 | 371 |
skeletal element | 2.31e-17 | 90 |
skeletal system | 1.46e-16 | 100 |
musculoskeletal system | 3.79e-14 | 167 |
mesoderm | 1.67e-11 | 315 |
mesoderm-derived structure | 1.67e-11 | 315 |
presumptive mesoderm | 1.67e-11 | 315 |
cardiovascular system | 9.82e-07 | 109 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.