FFCP PHASE1:Mm9::chr14:61791923..61791937,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=50720|HGNC=|MCL_coexpression_id=2919|UniProt=E9QLK5,D3Z3H1|association_with_transcript=96bp_to_ENSMUST00000100499,ENSMUST00000121091,uc007ufq.1_5end|description=CAGE_peak_4_at_Sacs_5end|id=chr14:61791923..61791937,+|ontology_enrichment_celltype=CL:0000791!1.49e-07!9;CL:0000789!1.49e-07!9;CL:0002420!1.49e-07!9;CL:0002419!1.49e-07!9;CL:0000790!1.49e-07!9;CL:0000838!1.67e-07!12;CL:0000084!6.17e-07!11;CL:0000827!6.17e-07!11;CL:0000624!7.20e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-10,9;CL:0000789,1.24e-10,9;CL:0002420,1.24e-10,9;CL:0002419,1.24e-10,9;CL:0000790,1.24e-10,9;CL:0000624,1.34e-09,8;CL:0000838,6.38e-09,12;CL:0000988,1.20e-08,32;CL:0002032,1.20e-08,32;CL:0000037,1.20e-08,32;CL:0000837,1.20e-08,32;CL:0002031,2.29e-08,25;CL:0000084,4.38e-08,11;CL:0000827,4.38e-08,11;CL:0000542,5.97e-08,13;CL:0000051,5.97e-08,13;CL:0000893,1.09e-07,6;CL:0002489,1.09e-07,6;CL:0000898,1.09e-07,6;CL:0000809,1.09e-07,6;CL:0000810,1.09e-07,6;CL:0000895,1.09e-07,6;CL:0000808,1.09e-07,6;CL:0000894,1.09e-07,6;CL:0000806,1.09e-07,6;CL:0000807,1.09e-07,6;CL:0000805,1.09e-07,6;CL:0002425,1.09e-07,6;CL:0002436,1.09e-07,6;CL:0002427,1.09e-07,6;CL:0002428,1.09e-07,6;CL:0002429,1.09e-07,6;CL:0002433,1.09e-07,6;CL:0002431,1.09e-07,6;CL:0002432,1.09e-07,6;CL:0000738,6.13e-07,17;CL:0002087,6.13e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.18e-07!29;UBERON:0002370!7.98e-07!23;UBERON:0000974!7.98e-07!23;UBERON:0004807!7.98e-07!23;UBERON:0005058!7.98e-07!23;UBERON:0003351!7.98e-07!23;UBERON:0009113!7.98e-07!23;UBERON:0003295!7.98e-07!23;UBERON:0009722!7.98e-07!23;UBERON:0005562!7.98e-07!23;UBERON:0007690!7.98e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.67e-10,23;UBERON:0000974,4.67e-10,23;UBERON:0004807,4.67e-10,23;UBERON:0005058,4.67e-10,23;UBERON:0003351,4.67e-10,23;UBERON:0009113,4.67e-10,23;UBERON:0003295,4.67e-10,23;UBERON:0009722,4.67e-10,23;UBERON:0005562,4.67e-10,23;UBERON:0007690,4.67e-10,23;UBERON:0006562,2.23e-09,24;UBERON:0003408,2.23e-09,24;UBERON:0001557,2.23e-09,24;UBERON:0001042,2.23e-09,24;UBERON:0008814,2.23e-09,24;UBERON:0009145,2.23e-09,24;UBERON:0004177,3.13e-09,29;UBERON:0005057,3.13e-09,29;UBERON:0002390,9.81e-09,45;UBERON:0003061,9.81e-09,45;UBERON:0002193,1.30e-08,48;UBERON:0002405,1.30e-08,48;UBERON:0000072,1.15e-07,27;UBERON:0000077,1.44e-07,35;UBERON:0000073,5.80e-07,54|phase1_expression=0.160148847104794,0,0,0,0,0,0,7.23090611272827,10.4183654392233,15.4482587372516,7.70480857014772,6.62108919661292,9.0736386863539,6.90621179110079,0.999329285446988,1.21485160433896,0.699561878128147,2.5236973228659,2.4680598049033,1.27316895539409,0.850432901510698,0.992909512008853,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0,0,1.27006134691926,1.23012957516914,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.251793635951155,0.506884656097573,1.10128051297009,0,0.218025156380447,0,0,0.139986421625363,0,3.52343472721246,4.35217285206807,8.4023449785616,0.257259436035947,0,0,0,0,0,0.338844532069132,0,0,0,0.7104801149461,1.19840044207362,0,0.414758449233911,0.135005938331691,0.210324961351382,1.99955689082663,1.10434270475807,0,0.0958454710182364,0,2.20231761998777,4.08599481872601,3.37934373163736,0.131886287730194,0.182975287204819,0,3.07101298901519,1.68828783009504,2.29197371665215,2.65165726926301,1.13897344639282,0.372798891650601,6.6639050133202,6.04572480854284,0.579728977403356,0,0,0,0,0.448026887097336,0.421333260395256,0.511290967734173,0.779358013808606,0.35333957451034,0.563373679106722,1.28326477414318,0,0,0,0,0.505524445014783,0.22836775943812,4.14300613835475,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.251333182659351,0.247194967734374,1.59059292611903,0,0.808834249737046,1.10420759230197,0.484875253135222,0,2.04946557908083,1.67557365450764,0,2.15667224110656,0,1.90605340609597,4.79330046095433,1.37250180845588,0.628271760564322,4.17178368461463,3.3243009452943,2.49345653471472,4.54275536589721,0.203678727700633,0.497627882440372,0,0.420883711772948,0.390361328888111,0.459804208866946,0.720248519221397,0.150704817835715,0.816437989815934,0.384341160854549,0.655912071918102,0.258703370739016,0.215567992932842,0.756424320671277,0.527853372491847,0.43839146485515,0.834141747676794,0,0.61734640922383,0.199034266818493,2.1066395619397,1.02939162845886,0.284163499395593,1.44988040774851,1.64168241986767,0.720248245844059,1.42046841351126,1.18058539048442,1.85120535464854,1.39520366850245,2.68273401399619,1.16765342367169,0.493679549740441,0.820837320395476,1.21603214318784,0.730999937126662,0.439100230582101,0.671032093801859,2.73376933133365,0.617427674275707,0,0,0,1.39342003116263,0.38660238396628,1.00841762311671,0.22237804384487,0.760902504450237,0.949058123089023,0.494096864172033,0.754005626400808,0.198956472041151,0.58489226135736,0,0.216138049874694,0,0,0.571242563048644,0,0.814605311381257,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| ||
|EntrezGene=50720 | |||
|HGNC= | |||
|MCL_coexpression_id=2919 | |||
|UniProt=E9QLK5,D3Z3H1 | |||
|association_with_transcript=96bp_to_ENSMUST00000100499,ENSMUST00000121091,uc007ufq.1_5end | |||
|description=CAGE_peak_4_at_Sacs_5end | |||
|id=chr14:61791923..61791937,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.49e-07!9;CL:0000789!1.49e-07!9;CL:0002420!1.49e-07!9;CL:0002419!1.49e-07!9;CL:0000790!1.49e-07!9;CL:0000838!1.67e-07!12;CL:0000084!6.17e-07!11;CL:0000827!6.17e-07!11;CL:0000624!7.20e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.24e-10,9;CL:0000789,1.24e-10,9;CL:0002420,1.24e-10,9;CL:0002419,1.24e-10,9;CL:0000790,1.24e-10,9;CL:0000624,1.34e-09,8;CL:0000838,6.38e-09,12;CL:0000988,1.20e-08,32;CL:0002032,1.20e-08,32;CL:0000037,1.20e-08,32;CL:0000837,1.20e-08,32;CL:0002031,2.29e-08,25;CL:0000084,4.38e-08,11;CL:0000827,4.38e-08,11;CL:0000542,5.97e-08,13;CL:0000051,5.97e-08,13;CL:0000893,1.09e-07,6;CL:0002489,1.09e-07,6;CL:0000898,1.09e-07,6;CL:0000809,1.09e-07,6;CL:0000810,1.09e-07,6;CL:0000895,1.09e-07,6;CL:0000808,1.09e-07,6;CL:0000894,1.09e-07,6;CL:0000806,1.09e-07,6;CL:0000807,1.09e-07,6;CL:0000805,1.09e-07,6;CL:0002425,1.09e-07,6;CL:0002436,1.09e-07,6;CL:0002427,1.09e-07,6;CL:0002428,1.09e-07,6;CL:0002429,1.09e-07,6;CL:0002433,1.09e-07,6;CL:0002431,1.09e-07,6;CL:0002432,1.09e-07,6;CL:0000738,6.13e-07,17;CL:0002087,6.13e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.18e-07!29;UBERON:0002370!7.98e-07!23;UBERON:0000974!7.98e-07!23;UBERON:0004807!7.98e-07!23;UBERON:0005058!7.98e-07!23;UBERON:0003351!7.98e-07!23;UBERON:0009113!7.98e-07!23;UBERON:0003295!7.98e-07!23;UBERON:0009722!7.98e-07!23;UBERON:0005562!7.98e-07!23;UBERON:0007690!7.98e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.67e-10,23;UBERON:0000974,4.67e-10,23;UBERON:0004807,4.67e-10,23;UBERON:0005058,4.67e-10,23;UBERON:0003351,4.67e-10,23;UBERON:0009113,4.67e-10,23;UBERON:0003295,4.67e-10,23;UBERON:0009722,4.67e-10,23;UBERON:0005562,4.67e-10,23;UBERON:0007690,4.67e-10,23;UBERON:0006562,2.23e-09,24;UBERON:0003408,2.23e-09,24;UBERON:0001557,2.23e-09,24;UBERON:0001042,2.23e-09,24;UBERON:0008814,2.23e-09,24;UBERON:0009145,2.23e-09,24;UBERON:0004177,3.13e-09,29;UBERON:0005057,3.13e-09,29;UBERON:0002390,9.81e-09,45;UBERON:0003061,9.81e-09,45;UBERON:0002193,1.30e-08,48;UBERON:0002405,1.30e-08,48;UBERON:0000072,1.15e-07,27;UBERON:0000077,1.44e-07,35;UBERON:0000073,5.80e-07,54 | |||
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| |||
|short_description=p4@Sacs | |||
}} |
Revision as of 02:40, 13 September 2013
Short description: | p4@Sacs |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sacs_5end |
Coexpression cluster: | MCL_coexpression_mm9:2919 |
Association with transcript: | 96bp_to_ENSMUST00000100499, ENSMUST00000121091, uc007ufq.1_5end |
EntrezGene: | Sacs |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.67e-10 | 23 |
neck | 4.67e-10 | 23 |
respiratory system epithelium | 4.67e-10 | 23 |
hemolymphoid system gland | 4.67e-10 | 23 |
pharyngeal epithelium | 4.67e-10 | 23 |
thymic region | 4.67e-10 | 23 |
pharyngeal gland | 4.67e-10 | 23 |
entire pharyngeal arch endoderm | 4.67e-10 | 23 |
thymus primordium | 4.67e-10 | 23 |
early pharyngeal endoderm | 4.67e-10 | 23 |
pharynx | 2.23e-09 | 24 |
gland of gut | 2.23e-09 | 24 |
upper respiratory tract | 2.23e-09 | 24 |
chordate pharynx | 2.23e-09 | 24 |
pharyngeal arch system | 2.23e-09 | 24 |
pharyngeal region of foregut | 2.23e-09 | 24 |
hemopoietic organ | 3.13e-09 | 29 |
immune organ | 3.13e-09 | 29 |
hematopoietic system | 9.81e-09 | 45 |
blood island | 9.81e-09 | 45 |
hemolymphoid system | 1.30e-08 | 48 |
immune system | 1.30e-08 | 48 |
segment of respiratory tract | 1.15e-07 | 27 |
mixed endoderm/mesoderm-derived structure | 1.44e-07 | 35 |
regional part of nervous system | 5.80e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.