FFCP PHASE1:Mm9::chr15:80403104..80403111,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17444|HGNC=|MCL_coexpression_id=118|UniProt=Q3U0E8|association_with_transcript=80bp_to_uc007wvo.1,uc007wvp.1_5end|description=CAGE_peak_10_at_Grap2_5end|id=chr15:80403104..80403111,+|ontology_enrichment_celltype=CL:0000791!2.15e-19!9;CL:0000789!2.15e-19!9;CL:0002420!2.15e-19!9;CL:0002419!2.15e-19!9;CL:0000790!2.15e-19!9;CL:0000084!2.70e-19!11;CL:0000827!2.70e-19!11;CL:0000838!1.55e-17!12;CL:0000893!4.03e-17!6;CL:0002489!4.03e-17!6;CL:0000898!4.03e-17!6;CL:0000809!4.03e-17!6;CL:0000810!4.03e-17!6;CL:0000895!4.03e-17!6;CL:0000808!4.03e-17!6;CL:0000894!4.03e-17!6;CL:0000806!4.03e-17!6;CL:0000807!4.03e-17!6;CL:0000805!4.03e-17!6;CL:0002425!4.03e-17!6;CL:0002436!4.03e-17!6;CL:0002427!4.03e-17!6;CL:0002428!4.03e-17!6;CL:0002429!4.03e-17!6;CL:0002433!4.03e-17!6;CL:0002431!4.03e-17!6;CL:0002432!4.03e-17!6;CL:0000624!6.37e-17!8;CL:0000542!4.78e-16!13;CL:0000051!4.78e-16!13;CL:0000738!7.60e-12!17;CL:0002087!7.60e-12!17;CL:0002031!4.23e-09!25|ontology_enrichment_celltype_v019_2=CL:0000893,2.25e-65,6;CL:0002489,2.25e-65,6;CL:0000898,2.25e-65,6;CL:0000809,2.25e-65,6;CL:0000810,2.25e-65,6;CL:0000895,2.25e-65,6;CL:0000808,2.25e-65,6;CL:0000894,2.25e-65,6;CL:0000806,2.25e-65,6;CL:0000807,2.25e-65,6;CL:0000805,2.25e-65,6;CL:0002425,2.25e-65,6;CL:0002436,2.25e-65,6;CL:0002427,2.25e-65,6;CL:0002428,2.25e-65,6;CL:0002429,2.25e-65,6;CL:0002433,2.25e-65,6;CL:0002431,2.25e-65,6;CL:0002432,2.25e-65,6;CL:0000791,5.87e-59,9;CL:0000789,5.87e-59,9;CL:0002420,5.87e-59,9;CL:0002419,5.87e-59,9;CL:0000790,5.87e-59,9;CL:0000624,3.83e-49,8;CL:0000084,2.66e-48,11;CL:0000827,2.66e-48,11;CL:0000838,2.65e-44,12;CL:0000542,6.43e-41,13;CL:0000051,6.43e-41,13;CL:0000738,2.37e-31,17;CL:0002087,2.37e-31,17;CL:0002031,2.24e-21,25;CL:0000988,1.01e-16,32;CL:0002032,1.01e-16,32;CL:0000037,1.01e-16,32;CL:0000837,1.01e-16,32;CL:0000625,7.11e-12,1;CL:0002320,1.22e-11,46;CL:0000134,1.22e-11,46;CL:0000219,6.54e-10,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.32e-39!29;UBERON:0002370!3.61e-38!23;UBERON:0000974!3.61e-38!23;UBERON:0004807!3.61e-38!23;UBERON:0005058!3.61e-38!23;UBERON:0003351!3.61e-38!23;UBERON:0009113!3.61e-38!23;UBERON:0003295!3.61e-38!23;UBERON:0009722!3.61e-38!23;UBERON:0005562!3.61e-38!23;UBERON:0007690!3.61e-38!23;UBERON:0006562!2.18e-36!24;UBERON:0003408!2.18e-36!24;UBERON:0001557!2.18e-36!24;UBERON:0001042!2.18e-36!24;UBERON:0008814!2.18e-36!24;UBERON:0009145!2.18e-36!24;UBERON:0000072!7.71e-32!27;UBERON:0002193!1.95e-26!48;UBERON:0002390!8.44e-26!45;UBERON:0003061!8.44e-26!45;UBERON:0000063!1.61e-23!35;UBERON:0000065!1.42e-21!41;UBERON:0001004!6.00e-21!42;UBERON:0005057!3.69e-20!51;UBERON:0002405!2.16e-16!70;UBERON:0003929!2.51e-13!55;UBERON:0000064!2.13e-12!99;UBERON:0003081!6.47e-12!88;UBERON:0002368!7.59e-12!60;UBERON:0005911!6.46e-11!69;UBERON:0002530!1.35e-10!65;UBERON:0000490!2.28e-10!66;UBERON:0004921!3.48e-10!126;UBERON:0004185!3.48e-10!126;UBERON:0001041!6.24e-10!92;UBERON:0001007!6.26e-10!128;UBERON:0001555!6.26e-10!128;UBERON:0007026!6.26e-10!128;UBERON:0004119!1.11e-09!130;UBERON:0000925!1.11e-09!130;UBERON:0006595!1.11e-09!130;UBERON:0000077!3.75e-09!97;UBERON:0000949!3.85e-09!72;UBERON:0007811!5.87e-07!86;UBERON:0000153!6.18e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.84e-17,23;UBERON:0000974,2.84e-17,23;UBERON:0004807,2.84e-17,23;UBERON:0005058,2.84e-17,23;UBERON:0003351,2.84e-17,23;UBERON:0009113,2.84e-17,23;UBERON:0003295,2.84e-17,23;UBERON:0009722,2.84e-17,23;UBERON:0005562,2.84e-17,23;UBERON:0007690,2.84e-17,23;UBERON:0006562,1.46e-16,24;UBERON:0003408,1.46e-16,24;UBERON:0001557,1.46e-16,24;UBERON:0001042,1.46e-16,24;UBERON:0008814,1.46e-16,24;UBERON:0009145,1.46e-16,24;UBERON:0000072,9.75e-15,27;UBERON:0004177,9.92e-14,29;UBERON:0005057,9.92e-14,29;UBERON:0000029,2.01e-12,1;UBERON:0001097,2.01e-12,1;UBERON:0003968,2.01e-12,1;UBERON:0001467,2.01e-12,1;UBERON:0002384,1.22e-11,46;UBERON:0000077,2.16e-11,35;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0007811,4.45e-11,36;UBERON:0000065,9.85e-10,41;UBERON:0001004,1.68e-09,42;UBERON:0000153,2.78e-09,43;UBERON:0002390,7.19e-09,45;UBERON:0003061,7.19e-09,45;UBERON:0003929,2.97e-07,55|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,2.67498572088167,1.17032263160997,1.02730780935303,1.27635454392538,1.88320802924326,1.31130603628496,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=17444 | |||
|HGNC= | |||
|MCL_coexpression_id=118 | |||
|UniProt=Q3U0E8 | |||
|association_with_transcript=80bp_to_uc007wvo.1,uc007wvp.1_5end | |||
|description=CAGE_peak_10_at_Grap2_5end | |||
|id=chr15:80403104..80403111,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.15e-19!9;CL:0000789!2.15e-19!9;CL:0002420!2.15e-19!9;CL:0002419!2.15e-19!9;CL:0000790!2.15e-19!9;CL:0000084!2.70e-19!11;CL:0000827!2.70e-19!11;CL:0000838!1.55e-17!12;CL:0000893!4.03e-17!6;CL:0002489!4.03e-17!6;CL:0000898!4.03e-17!6;CL:0000809!4.03e-17!6;CL:0000810!4.03e-17!6;CL:0000895!4.03e-17!6;CL:0000808!4.03e-17!6;CL:0000894!4.03e-17!6;CL:0000806!4.03e-17!6;CL:0000807!4.03e-17!6;CL:0000805!4.03e-17!6;CL:0002425!4.03e-17!6;CL:0002436!4.03e-17!6;CL:0002427!4.03e-17!6;CL:0002428!4.03e-17!6;CL:0002429!4.03e-17!6;CL:0002433!4.03e-17!6;CL:0002431!4.03e-17!6;CL:0002432!4.03e-17!6;CL:0000624!6.37e-17!8;CL:0000542!4.78e-16!13;CL:0000051!4.78e-16!13;CL:0000738!7.60e-12!17;CL:0002087!7.60e-12!17;CL:0002031!4.23e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,2.25e-65,6;CL:0002489,2.25e-65,6;CL:0000898,2.25e-65,6;CL:0000809,2.25e-65,6;CL:0000810,2.25e-65,6;CL:0000895,2.25e-65,6;CL:0000808,2.25e-65,6;CL:0000894,2.25e-65,6;CL:0000806,2.25e-65,6;CL:0000807,2.25e-65,6;CL:0000805,2.25e-65,6;CL:0002425,2.25e-65,6;CL:0002436,2.25e-65,6;CL:0002427,2.25e-65,6;CL:0002428,2.25e-65,6;CL:0002429,2.25e-65,6;CL:0002433,2.25e-65,6;CL:0002431,2.25e-65,6;CL:0002432,2.25e-65,6;CL:0000791,5.87e-59,9;CL:0000789,5.87e-59,9;CL:0002420,5.87e-59,9;CL:0002419,5.87e-59,9;CL:0000790,5.87e-59,9;CL:0000624,3.83e-49,8;CL:0000084,2.66e-48,11;CL:0000827,2.66e-48,11;CL:0000838,2.65e-44,12;CL:0000542,6.43e-41,13;CL:0000051,6.43e-41,13;CL:0000738,2.37e-31,17;CL:0002087,2.37e-31,17;CL:0002031,2.24e-21,25;CL:0000988,1.01e-16,32;CL:0002032,1.01e-16,32;CL:0000037,1.01e-16,32;CL:0000837,1.01e-16,32;CL:0000625,7.11e-12,1;CL:0002320,1.22e-11,46;CL:0000134,1.22e-11,46;CL:0000219,6.54e-10,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.32e-39!29;UBERON:0002370!3.61e-38!23;UBERON:0000974!3.61e-38!23;UBERON:0004807!3.61e-38!23;UBERON:0005058!3.61e-38!23;UBERON:0003351!3.61e-38!23;UBERON:0009113!3.61e-38!23;UBERON:0003295!3.61e-38!23;UBERON:0009722!3.61e-38!23;UBERON:0005562!3.61e-38!23;UBERON:0007690!3.61e-38!23;UBERON:0006562!2.18e-36!24;UBERON:0003408!2.18e-36!24;UBERON:0001557!2.18e-36!24;UBERON:0001042!2.18e-36!24;UBERON:0008814!2.18e-36!24;UBERON:0009145!2.18e-36!24;UBERON:0000072!7.71e-32!27;UBERON:0002193!1.95e-26!48;UBERON:0002390!8.44e-26!45;UBERON:0003061!8.44e-26!45;UBERON:0000063!1.61e-23!35;UBERON:0000065!1.42e-21!41;UBERON:0001004!6.00e-21!42;UBERON:0005057!3.69e-20!51;UBERON:0002405!2.16e-16!70;UBERON:0003929!2.51e-13!55;UBERON:0000064!2.13e-12!99;UBERON:0003081!6.47e-12!88;UBERON:0002368!7.59e-12!60;UBERON:0005911!6.46e-11!69;UBERON:0002530!1.35e-10!65;UBERON:0000490!2.28e-10!66;UBERON:0004921!3.48e-10!126;UBERON:0004185!3.48e-10!126;UBERON:0001041!6.24e-10!92;UBERON:0001007!6.26e-10!128;UBERON:0001555!6.26e-10!128;UBERON:0007026!6.26e-10!128;UBERON:0004119!1.11e-09!130;UBERON:0000925!1.11e-09!130;UBERON:0006595!1.11e-09!130;UBERON:0000077!3.75e-09!97;UBERON:0000949!3.85e-09!72;UBERON:0007811!5.87e-07!86;UBERON:0000153!6.18e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.84e-17,23;UBERON:0000974,2.84e-17,23;UBERON:0004807,2.84e-17,23;UBERON:0005058,2.84e-17,23;UBERON:0003351,2.84e-17,23;UBERON:0009113,2.84e-17,23;UBERON:0003295,2.84e-17,23;UBERON:0009722,2.84e-17,23;UBERON:0005562,2.84e-17,23;UBERON:0007690,2.84e-17,23;UBERON:0006562,1.46e-16,24;UBERON:0003408,1.46e-16,24;UBERON:0001557,1.46e-16,24;UBERON:0001042,1.46e-16,24;UBERON:0008814,1.46e-16,24;UBERON:0009145,1.46e-16,24;UBERON:0000072,9.75e-15,27;UBERON:0004177,9.92e-14,29;UBERON:0005057,9.92e-14,29;UBERON:0000029,2.01e-12,1;UBERON:0001097,2.01e-12,1;UBERON:0003968,2.01e-12,1;UBERON:0001467,2.01e-12,1;UBERON:0002384,1.22e-11,46;UBERON:0000077,2.16e-11,35;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0007811,4.45e-11,36;UBERON:0000065,9.85e-10,41;UBERON:0001004,1.68e-09,42;UBERON:0000153,2.78e-09,43;UBERON:0002390,7.19e-09,45;UBERON:0003061,7.19e-09,45;UBERON:0003929,2.97e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.645616617207881,2.67498572088167,1.17032263160997,1.02730780935303,1.27635454392538,1.88320802924326,1.31130603628496,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.198581902401771,0,0,0,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.308132871494482,0.25984164595559,0.358053391334963,0.79472541912506,0.360586348559907,0.443068581523732,0.605798699688886,0.457240839929999,0.504130925684203,0.779663045918019,0.577271049841977,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Grap2 | |||
}} |
Revision as of 11:15, 13 September 2013
Short description: | p10@Grap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Grap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:118 |
Association with transcript: | 80bp_to_uc007wvo.1, uc007wvp.1_5end |
EntrezGene: | Grap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.84e-17 | 23 |
neck | 2.84e-17 | 23 |
respiratory system epithelium | 2.84e-17 | 23 |
hemolymphoid system gland | 2.84e-17 | 23 |
pharyngeal epithelium | 2.84e-17 | 23 |
thymic region | 2.84e-17 | 23 |
pharyngeal gland | 2.84e-17 | 23 |
entire pharyngeal arch endoderm | 2.84e-17 | 23 |
thymus primordium | 2.84e-17 | 23 |
early pharyngeal endoderm | 2.84e-17 | 23 |
pharynx | 1.46e-16 | 24 |
gland of gut | 1.46e-16 | 24 |
upper respiratory tract | 1.46e-16 | 24 |
chordate pharynx | 1.46e-16 | 24 |
pharyngeal arch system | 1.46e-16 | 24 |
pharyngeal region of foregut | 1.46e-16 | 24 |
segment of respiratory tract | 9.75e-15 | 27 |
hemopoietic organ | 9.92e-14 | 29 |
immune organ | 9.92e-14 | 29 |
lymph node | 2.01e-12 | 1 |
axillary lymph node | 2.01e-12 | 1 |
peripheral lymph node | 2.01e-12 | 1 |
shoulder | 2.01e-12 | 1 |
connective tissue | 1.22e-11 | 46 |
mixed endoderm/mesoderm-derived structure | 2.16e-11 | 35 |
hemolymphoid system | 3.09e-11 | 48 |
immune system | 3.09e-11 | 48 |
craniocervical region | 4.45e-11 | 36 |
respiratory tract | 9.85e-10 | 41 |
respiratory system | 1.68e-09 | 42 |
anterior region of body | 2.78e-09 | 43 |
hematopoietic system | 7.19e-09 | 45 |
blood island | 7.19e-09 | 45 |
gut epithelium | 2.97e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.