FFCP PHASE1:Hg19::chr4:74275128..74275150,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=213|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=399|TSSclassifier=S|UniProt=|association_with_transcript=73bp_to_uc003hgx.3_5end|coexpression_cluster_id=C5|description=CAGE_peak_16_at_ALB_5end|id=chr4:74275128..74275150,+|ontology_enrichment_celltype=CL:0000181!1.23e-38!12;CL:0000417!1.23e-38!12;CL:0000668!1.23e-38!12;CL:0000414!1.23e-38!12;CL:0000412!1.23e-38!12;CL:0000182!1.23e-38!12;CL:0000223!1.77e-09!59|ontology_enrichment_celltype_v019=CL:0000182;1.37e-53;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.37e-53,12;CL:0000223,7.04e-15,58|ontology_enrichment_development_v019=UBERON:0004161;8.20e-41;11!UBERON:0009497;1.39e-34;13!UBERON:0001041;4.14e-15;30!UBERON:0003104;1.35e-14;31!CL:0000223;4.53e-11;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.12e-40!19;UBERON:0006925!5.12e-40!19;UBERON:0008836!5.12e-40!19;UBERON:0009497!4.63e-37!25;UBERON:0000015!4.63e-37!25;UBERON:0002423!4.63e-37!25;UBERON:0006235!4.63e-37!25;UBERON:0004161!4.63e-37!25;UBERON:0005057!1.55e-35!26;UBERON:0008835!2.07e-34!22;UBERON:0003894!2.07e-34!22;UBERON:0009854!7.25e-33!23;UBERON:0007499!3.80e-30!25;UBERON:0009856!6.06e-29!26;UBERON:0002365!4.33e-24!31;UBERON:0002330!4.33e-24!31;UBERON:0002368!3.34e-21!35;UBERON:0000949!5.21e-20!45;UBERON:0003929!6.72e-20!54;UBERON:0005172!1.96e-19!55;UBERON:0005173!1.96e-19!55;UBERON:0002417!2.33e-17!61;UBERON:0000916!2.33e-17!61;UBERON:0005911!1.57e-12!82;UBERON:0002530!4.41e-12!59;UBERON:0005177!5.21e-11!107;UBERON:0007029!9.05e-11!1;UBERON:0001041!3.48e-10!98;UBERON:0000466!4.64e-09!126;UBERON:0004921!9.62e-09!129;UBERON:0004185!9.62e-09!129;UBERON:0000077!1.01e-08!130;UBERON:0009569!1.37e-08!113;UBERON:0002405!2.55e-08!115;UBERON:0001007!2.74e-08!155;UBERON:0001555!2.74e-08!155;UBERON:0007026!2.74e-08!155;UBERON:0003914!3.71e-08!118;UBERON:0004119!1.97e-07!169;UBERON:0000925!1.97e-07!169;UBERON:0006595!1.97e-07!169;UBERON:0000490!9.46e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;4.48e-60;19!UBERON:0006925;4.48e-60;19!UBERON:0002423;1.27e-45;25!UBERON:0002365;2.36e-35;31!UBERON:0002330;2.36e-35;31!UBERON:0002368;3.61e-31;33!UBERON:0000949;8.92e-23;43!UBERON:0005172;1.30e-13;52!UBERON:0005173;1.30e-13;52!UBERON:0002417;6.30e-12;58!UBERON:0000916;6.30e-12;58!UBERON:0002530;8.32e-12;57!UBERON:0001007;7.23e-11;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.48e-60,19;UBERON:0006925,4.48e-60,19;UBERON:0008836,4.48e-60,19;UBERON:0008835,7.26e-52,22;UBERON:0003894,7.26e-52,22;UBERON:0009854,1.33e-49,23;UBERON:0007499,1.27e-45,25;UBERON:0009497,1.27e-45,25;UBERON:0000015,1.27e-45,25;UBERON:0002423,1.27e-45,25;UBERON:0006235,1.27e-45,25;UBERON:0004161,1.27e-45,25;UBERON:0009856,7.35e-44,26;UBERON:0002365,9.40e-37,31;UBERON:0002330,9.40e-37,31;UBERON:0002368,1.59e-32,35;UBERON:0003929,1.88e-26,54;UBERON:0000949,3.10e-25,45;UBERON:0005172,5.65e-21,54;UBERON:0005173,5.65e-21,54;UBERON:0002530,3.63e-19,59;UBERON:0002417,7.69e-19,60;UBERON:0000916,7.69e-19,60;UBERON:0005911,2.91e-17,82;UBERON:0001041,7.31e-13,87;UBERON:0004921,1.01e-11,118;UBERON:0005177,5.18e-11,101;UBERON:0009569,7.02e-10,112;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0003914,1.95e-09,117;UBERON:0000490,2.67e-09,148;UBERON:0005256,5.01e-09,122;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0001048,9.61e-07,160;UBERON:0003104,9.61e-07,160;UBERON:0009142,9.61e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,166.049095616598,58.9696330006576,28.9487054273888,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6876220167601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0422510066233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=399 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=73bp_to_uc003hgx.3_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_16_at_ALB_5end | |||
|id=chr4:74275128..74275150,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.23e-38!12;CL:0000417!1.23e-38!12;CL:0000668!1.23e-38!12;CL:0000414!1.23e-38!12;CL:0000412!1.23e-38!12;CL:0000182!1.23e-38!12;CL:0000223!1.77e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.37e-53;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.37e-53,12;CL:0000223,7.04e-15,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.20e-41;11!UBERON:0009497;1.39e-34;13!UBERON:0001041;4.14e-15;30!UBERON:0003104;1.35e-14;31!CL:0000223;4.53e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.12e-40!19;UBERON:0006925!5.12e-40!19;UBERON:0008836!5.12e-40!19;UBERON:0009497!4.63e-37!25;UBERON:0000015!4.63e-37!25;UBERON:0002423!4.63e-37!25;UBERON:0006235!4.63e-37!25;UBERON:0004161!4.63e-37!25;UBERON:0005057!1.55e-35!26;UBERON:0008835!2.07e-34!22;UBERON:0003894!2.07e-34!22;UBERON:0009854!7.25e-33!23;UBERON:0007499!3.80e-30!25;UBERON:0009856!6.06e-29!26;UBERON:0002365!4.33e-24!31;UBERON:0002330!4.33e-24!31;UBERON:0002368!3.34e-21!35;UBERON:0000949!5.21e-20!45;UBERON:0003929!6.72e-20!54;UBERON:0005172!1.96e-19!55;UBERON:0005173!1.96e-19!55;UBERON:0002417!2.33e-17!61;UBERON:0000916!2.33e-17!61;UBERON:0005911!1.57e-12!82;UBERON:0002530!4.41e-12!59;UBERON:0005177!5.21e-11!107;UBERON:0007029!9.05e-11!1;UBERON:0001041!3.48e-10!98;UBERON:0000466!4.64e-09!126;UBERON:0004921!9.62e-09!129;UBERON:0004185!9.62e-09!129;UBERON:0000077!1.01e-08!130;UBERON:0009569!1.37e-08!113;UBERON:0002405!2.55e-08!115;UBERON:0001007!2.74e-08!155;UBERON:0001555!2.74e-08!155;UBERON:0007026!2.74e-08!155;UBERON:0003914!3.71e-08!118;UBERON:0004119!1.97e-07!169;UBERON:0000925!1.97e-07!169;UBERON:0006595!1.97e-07!169;UBERON:0000490!9.46e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.48e-60;19!UBERON:0006925;4.48e-60;19!UBERON:0002423;1.27e-45;25!UBERON:0002365;2.36e-35;31!UBERON:0002330;2.36e-35;31!UBERON:0002368;3.61e-31;33!UBERON:0000949;8.92e-23;43!UBERON:0005172;1.30e-13;52!UBERON:0005173;1.30e-13;52!UBERON:0002417;6.30e-12;58!UBERON:0000916;6.30e-12;58!UBERON:0002530;8.32e-12;57!UBERON:0001007;7.23e-11;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.48e-60,19;UBERON:0006925,4.48e-60,19;UBERON:0008836,4.48e-60,19;UBERON:0008835,7.26e-52,22;UBERON:0003894,7.26e-52,22;UBERON:0009854,1.33e-49,23;UBERON:0007499,1.27e-45,25;UBERON:0009497,1.27e-45,25;UBERON:0000015,1.27e-45,25;UBERON:0002423,1.27e-45,25;UBERON:0006235,1.27e-45,25;UBERON:0004161,1.27e-45,25;UBERON:0009856,7.35e-44,26;UBERON:0002365,9.40e-37,31;UBERON:0002330,9.40e-37,31;UBERON:0002368,1.59e-32,35;UBERON:0003929,1.88e-26,54;UBERON:0000949,3.10e-25,45;UBERON:0005172,5.65e-21,54;UBERON:0005173,5.65e-21,54;UBERON:0002530,3.63e-19,59;UBERON:0002417,7.69e-19,60;UBERON:0000916,7.69e-19,60;UBERON:0005911,2.91e-17,82;UBERON:0001041,7.31e-13,87;UBERON:0004921,1.01e-11,118;UBERON:0005177,5.18e-11,101;UBERON:0009569,7.02e-10,112;UBERON:0001007,1.95e-09,145;UBERON:0001555,1.95e-09,145;UBERON:0007026,1.95e-09,145;UBERON:0003914,1.95e-09,117;UBERON:0000490,2.67e-09,148;UBERON:0005256,5.01e-09,122;UBERON:0004119,1.71e-08,160;UBERON:0000925,1.71e-08,160;UBERON:0006595,1.71e-08,160;UBERON:0001048,9.61e-07,160;UBERON:0003104,9.61e-07,160;UBERON:0009142,9.61e-07,160 | |||
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|short_description=p16@ALB | |||
}} |
Revision as of 11:34, 13 September 2013
Short description: | p16@ALB |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_ALB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 73bp_to_uc003hgx.3_5end |
EntrezGene: | ALB |
HGNC: | 399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.37e-53 | 12 |
endodermal cell | 7.04e-15 | 58 |
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