FFCP PHASE1:Hg19::chr5:118691642..118691653,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25816|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17260|TSSclassifier=S|UniProt=O95379|association_with_transcript=46bp_to_NM_014350,uc003ksi.2_5end|coexpression_cluster_id=C0|description=CAGE_peak_9_at_TNFAIP8_5end|id=chr5:118691642..118691653,+|ontology_enrichment_celltype=CL:0002194!7.54e-25!63;CL:0000576!7.54e-25!63;CL:0000040!7.54e-25!63;CL:0000559!7.54e-25!63;CL:0002009!1.36e-24!65;CL:0002057!3.49e-24!42;CL:0000860!4.79e-22!45;CL:0002087!8.09e-22!119;CL:0000557!1.80e-20!71;CL:0000839!5.50e-20!70;CL:0002031!3.20e-18!124;CL:0000766!1.78e-17!76;CL:0000738!4.06e-17!140;CL:0002320!7.19e-12!365;CL:0000134!2.11e-11!358;CL:0000034!2.15e-11!444;CL:0000048!4.28e-11!430;CL:0000723!8.24e-11!436;CL:0000945!6.69e-10!24;CL:0000826!6.69e-10!24;CL:0002032!2.65e-09!165;CL:0000837!2.65e-09!165;CL:0000037!3.85e-09!172;CL:0000566!3.85e-09!172;CL:0000219!7.88e-08!390;CL:0000236!8.65e-08!14;CL:0000763!1.27e-07!112;CL:0000049!1.27e-07!112;CL:0000988!2.71e-07!182|ontology_enrichment_celltype_v019=CL:0000860;6.13e-51;33!CL:0002057;6.13e-51;33!CL:0000473;2.28e-46;39!CL:0000234;2.28e-46;39!CL:0000576;1.96e-33;48!CL:0000766;1.56e-20;69!CL:0002087;6.63e-14;104!CL:0000236;1.75e-13;13!CL:0000945;2.28e-13;24!CL:0000738;7.12e-11;136!CL:0000763;4.36e-09;100!CL:0002619;5.16e-07;3|ontology_enrichment_celltype_v019_2=CL:0002194,1.39e-58,59;CL:0000576,1.39e-58,59;CL:0000040,1.39e-58,59;CL:0000559,1.39e-58,59;CL:0002009,2.86e-56,61;CL:0000473,1.61e-55,48;CL:0000234,1.61e-55,48;CL:0000860,3.57e-51,42;CL:0002057,3.57e-51,42;CL:0000839,4.25e-51,66;CL:0000557,3.72e-50,67;CL:0002087,4.69e-49,115;CL:0002031,2.34e-46,120;CL:0000766,7.83e-46,72;CL:0000738,4.63e-39,136;CL:0002032,1.42e-30,161;CL:0000837,1.42e-30,161;CL:0000037,1.18e-28,168;CL:0000763,1.62e-26,108;CL:0000049,1.62e-26,108;CL:0000988,2.05e-26,177;CL:0000134,9.19e-15,354;CL:0002320,3.91e-14,361;CL:0000945,2.63e-13,24;CL:0000826,2.63e-13,24;CL:0000236,2.25e-12,14;CL:0000219,6.20e-12,386;CL:0000034,7.12e-12,441;CL:0000048,1.31e-11,427;CL:0000723,3.38e-11,433;CL:0002619,4.27e-07,3|ontology_enrichment_development_v019=CL:0002057;1.97e-38;42!CL:0000049;5.41e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.55e-19!80;UBERON:0002390!7.70e-19!102;UBERON:0003061!7.70e-19!102;UBERON:0002193!1.93e-18!112;UBERON:0001474!3.72e-18!86;UBERON:0004765!2.71e-16!101;UBERON:0001434!2.71e-16!101;UBERON:0002405!2.88e-16!115;UBERON:0002204!2.91e-14!167;UBERON:0002384!4.42e-11!375;UBERON:0003081!1.21e-07!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-47,76;UBERON:0002390,3.37e-43,98;UBERON:0003061,3.37e-43,98;UBERON:0001474,8.02e-43,82;UBERON:0002405,5.79e-42,93;UBERON:0002193,6.52e-38,108;UBERON:0004765,6.85e-38,90;UBERON:0001434,1.51e-36,100;UBERON:0002204,5.66e-22,167;UBERON:0003081,3.17e-19,203;UBERON:0002384,2.80e-13,371;UBERON:0000926,8.02e-13,315;UBERON:0004120,8.02e-13,315;UBERON:0006603,8.02e-13,315|phase1_expression=0.726713517082227,0.856402095563933,0,2.00146596706261,0,0,0,0,0.261185628199839,0,0,0,0,0,0.662794751455832,0.672325146451775,1.80808358407193,1.46062018077475,0.975865597581014,0,0,0,0,0,0,2.52164238968239,1.31360943119913,3.7781175030566,0,0,0.464448369948228,0,0,0,0,0,0,1.66198622559563,2.00544447470142,1.30206522429511,1.79132379391939,1.29557466407592,4.37878464978117,0.581592955118259,1.13362783106643,1.94067248950253,6.27558399645349,9.45686142450199,8.6717783850629,13.5215424391411,12.2957139133968,11.5876292645407,11.721353145045,9.03678557017357,9.47985406160392,3.20011977222428,4.63940455098338,5.61808711112712,16.2224462956578,12.1953030288916,14.7047538933779,3.62836430205388,5.98390972864896,2.55734850319616,23.5069483289153,26.0997203357924,34.2552236947566,7.78870862295904,5.73631210262222,9.55630916702513,16.9511860737343,23.2014910672166,32.2791635189702,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.300353785683013,0.48217676009124,0,0,0,5.27988733383968,6.55366333514558,7.11607403090844,4.69403244823158,8.80871171479227,6.8970292794538,5.2883589822789,3.81621501814146,0.569212969109448,2.34894875748376,0.382273228125229,1.32171328579026,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0.486634870302636,0,0,0,0,0.364295288292542,0,1.62273696827342,1.39303789839414,2.6591592103773,0.953962497221368,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0,0.576175924479999,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0.103325781175765,0,0.2472669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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25816 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17260 | |||
|TSSclassifier=S | |||
|UniProt=O95379 | |||
|association_with_transcript=46bp_to_NM_014350,uc003ksi.2_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_TNFAIP8_5end | |||
|id=chr5:118691642..118691653,+ | |||
|ontology_enrichment_celltype=CL:0002194!7.54e-25!63;CL:0000576!7.54e-25!63;CL:0000040!7.54e-25!63;CL:0000559!7.54e-25!63;CL:0002009!1.36e-24!65;CL:0002057!3.49e-24!42;CL:0000860!4.79e-22!45;CL:0002087!8.09e-22!119;CL:0000557!1.80e-20!71;CL:0000839!5.50e-20!70;CL:0002031!3.20e-18!124;CL:0000766!1.78e-17!76;CL:0000738!4.06e-17!140;CL:0002320!7.19e-12!365;CL:0000134!2.11e-11!358;CL:0000034!2.15e-11!444;CL:0000048!4.28e-11!430;CL:0000723!8.24e-11!436;CL:0000945!6.69e-10!24;CL:0000826!6.69e-10!24;CL:0002032!2.65e-09!165;CL:0000837!2.65e-09!165;CL:0000037!3.85e-09!172;CL:0000566!3.85e-09!172;CL:0000219!7.88e-08!390;CL:0000236!8.65e-08!14;CL:0000763!1.27e-07!112;CL:0000049!1.27e-07!112;CL:0000988!2.71e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.13e-51;33!CL:0002057;6.13e-51;33!CL:0000473;2.28e-46;39!CL:0000234;2.28e-46;39!CL:0000576;1.96e-33;48!CL:0000766;1.56e-20;69!CL:0002087;6.63e-14;104!CL:0000236;1.75e-13;13!CL:0000945;2.28e-13;24!CL:0000738;7.12e-11;136!CL:0000763;4.36e-09;100!CL:0002619;5.16e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.39e-58,59;CL:0000576,1.39e-58,59;CL:0000040,1.39e-58,59;CL:0000559,1.39e-58,59;CL:0002009,2.86e-56,61;CL:0000473,1.61e-55,48;CL:0000234,1.61e-55,48;CL:0000860,3.57e-51,42;CL:0002057,3.57e-51,42;CL:0000839,4.25e-51,66;CL:0000557,3.72e-50,67;CL:0002087,4.69e-49,115;CL:0002031,2.34e-46,120;CL:0000766,7.83e-46,72;CL:0000738,4.63e-39,136;CL:0002032,1.42e-30,161;CL:0000837,1.42e-30,161;CL:0000037,1.18e-28,168;CL:0000763,1.62e-26,108;CL:0000049,1.62e-26,108;CL:0000988,2.05e-26,177;CL:0000134,9.19e-15,354;CL:0002320,3.91e-14,361;CL:0000945,2.63e-13,24;CL:0000826,2.63e-13,24;CL:0000236,2.25e-12,14;CL:0000219,6.20e-12,386;CL:0000034,7.12e-12,441;CL:0000048,1.31e-11,427;CL:0000723,3.38e-11,433;CL:0002619,4.27e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-38;42!CL:0000049;5.41e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.55e-19!80;UBERON:0002390!7.70e-19!102;UBERON:0003061!7.70e-19!102;UBERON:0002193!1.93e-18!112;UBERON:0001474!3.72e-18!86;UBERON:0004765!2.71e-16!101;UBERON:0001434!2.71e-16!101;UBERON:0002405!2.88e-16!115;UBERON:0002204!2.91e-14!167;UBERON:0002384!4.42e-11!375;UBERON:0003081!1.21e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.35e-47,76;UBERON:0002390,3.37e-43,98;UBERON:0003061,3.37e-43,98;UBERON:0001474,8.02e-43,82;UBERON:0002405,5.79e-42,93;UBERON:0002193,6.52e-38,108;UBERON:0004765,6.85e-38,90;UBERON:0001434,1.51e-36,100;UBERON:0002204,5.66e-22,167;UBERON:0003081,3.17e-19,203;UBERON:0002384,2.80e-13,371;UBERON:0000926,8.02e-13,315;UBERON:0004120,8.02e-13,315;UBERON:0006603,8.02e-13,315 | |||
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| |||
|short_description=p9@TNFAIP8 | |||
}} |
Revision as of 12:48, 13 September 2013
Short description: | p9@TNFAIP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TNFAIP8_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 46bp_to_NM_014350, uc003ksi.2_5end |
EntrezGene: | TNFAIP8 |
HGNC: | 17260 |
UniProt: | O95379 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.35e-47 | 76 |
hematopoietic system | 3.37e-43 | 98 |
blood island | 3.37e-43 | 98 |
bone element | 8.02e-43 | 82 |
immune system | 5.79e-42 | 93 |
hemolymphoid system | 6.52e-38 | 108 |
skeletal element | 6.85e-38 | 90 |
skeletal system | 1.51e-36 | 100 |
musculoskeletal system | 5.66e-22 | 167 |
lateral plate mesoderm | 3.17e-19 | 203 |
connective tissue | 2.80e-13 | 371 |
mesoderm | 8.02e-13 | 315 |
mesoderm-derived structure | 8.02e-13 | 315 |
presumptive mesoderm | 8.02e-13 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.