FFCP PHASE1:Mm9::chr18:66631168..66631175,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:66631168..66631175,-|id=chr18:66631168..66631175,-|ontology_enrichment_celltype=CL:0002563!2.90e-10!9;CL:0002251!2.90e-10!9;CL:0000063!5.75e-09!66;CL:0002076!1.14e-08!15;CL:0000066!8.82e-08!25;CL:0000239!1.82e-07!6;CL:0000677!1.82e-07!6;CL:0000212!1.82e-07!6;CL:0000584!1.82e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.24e-18,9;CL:0002251,2.24e-18,9;CL:0000066,5.55e-17,25;CL:0002076,8.79e-17,15;CL:0000223,5.32e-14,20;CL:0000239,5.58e-13,6;CL:0000677,5.58e-13,6;CL:0000584,5.58e-13,6;CL:0000075,5.64e-11,7;CL:0000682,4.20e-07,3;CL:0002250,5.74e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.08e-15!15;UBERON:0001242!1.78e-13!13;UBERON:0000060!1.78e-13!13;UBERON:0001262!1.78e-13!13;UBERON:0004786!1.78e-13!13;UBERON:0004923!4.69e-11!24;UBERON:0000160!8.60e-11!43;UBERON:0003350!2.90e-10!9;UBERON:0004808!2.90e-10!9;UBERON:0001277!2.90e-10!9;UBERON:0005409!5.09e-10!59;UBERON:0000485!9.06e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.12e-28,15;UBERON:0000160,3.02e-26,31;UBERON:0001242,1.35e-24,13;UBERON:0001262,1.35e-24,13;UBERON:0004786,1.35e-24,13;UBERON:0003350,2.24e-18,9;UBERON:0004808,2.24e-18,9;UBERON:0001277,2.24e-18,9;UBERON:0004923,6.32e-16,24;UBERON:0005409,3.34e-15,47;UBERON:0000485,1.24e-14,11;UBERON:0002108,1.49e-07,4|phase1_expression=0,32.4547129104606,34.1249429542152,47.4868811751723,73.631672302113,18.1309613664841,18.221785966451,3.22808308603941,0,0.234064526321993,0.171217968225505,0,0,0,0,0.202475267389826,0,1.89277299214943,1.64537320326887,1.27316895539409,0.255129870453209,3.57447424323187,1.82839852397255,6.07971206614945,8.25873411841812,28.711598205751,16.3689558540448,18.5305260109865,3.23039813075836,5.79669298447841,7.53883736228036,0,0,0,21.9527231010969,6.64938581433969,20.0085969137122,1.67412652294763,0.7813353445238,0.523523743973798,9.99993529652724,2.04913645487534,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,5.79728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,1.01104889002957,0.91347103775248,0.517875767294343,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,1.02182822083437,5.63131085177825,5.39912457894067,7.37007317023775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,6.31991868581911,9.77922047035918,13.3556844715929,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,3.70230793328962,0,0,0.257734922644187,0.201683524623343,1.77902435075896,1.33157938278791,1.42358718463353,1.31759163779209,0.754005626400808,0.795825888164603,1.16978452271472,1.79763881730844,0.648414149624083,1.7922714592893,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0,0,1.7488850197791,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,2.54967644990783,2.6590775941495,3.17859939750175,0,0,0,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p@chr18:66631168..66631175,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:66631168..66631175,- | |||
|id=chr18:66631168..66631175,- | |||
|ontology_enrichment_celltype=CL:0002563!2.90e-10!9;CL:0002251!2.90e-10!9;CL:0000063!5.75e-09!66;CL:0002076!1.14e-08!15;CL:0000066!8.82e-08!25;CL:0000239!1.82e-07!6;CL:0000677!1.82e-07!6;CL:0000212!1.82e-07!6;CL:0000584!1.82e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.24e-18,9;CL:0002251,2.24e-18,9;CL:0000066,5.55e-17,25;CL:0002076,8.79e-17,15;CL:0000223,5.32e-14,20;CL:0000239,5.58e-13,6;CL:0000677,5.58e-13,6;CL:0000584,5.58e-13,6;CL:0000075,5.64e-11,7;CL:0000682,4.20e-07,3;CL:0002250,5.74e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.08e-15!15;UBERON:0001242!1.78e-13!13;UBERON:0000060!1.78e-13!13;UBERON:0001262!1.78e-13!13;UBERON:0004786!1.78e-13!13;UBERON:0004923!4.69e-11!24;UBERON:0000160!8.60e-11!43;UBERON:0003350!2.90e-10!9;UBERON:0004808!2.90e-10!9;UBERON:0001277!2.90e-10!9;UBERON:0005409!5.09e-10!59;UBERON:0000485!9.06e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.12e-28,15;UBERON:0000160,3.02e-26,31;UBERON:0001242,1.35e-24,13;UBERON:0001262,1.35e-24,13;UBERON:0004786,1.35e-24,13;UBERON:0003350,2.24e-18,9;UBERON:0004808,2.24e-18,9;UBERON:0001277,2.24e-18,9;UBERON:0004923,6.32e-16,24;UBERON:0005409,3.34e-15,47;UBERON:0000485,1.24e-14,11;UBERON:0002108,1.49e-07,4 | |||
|phase1_expression=0,32.4547129104606,34.1249429542152,47.4868811751723,73.631672302113,18.1309613664841,18.221785966451,3.22808308603941,0,0.234064526321993,0.171217968225505,0,0,0,0,0.202475267389826,0,1.89277299214943,1.64537320326887,1.27316895539409,0.255129870453209,3.57447424323187,1.82839852397255,6.07971206614945,8.25873411841812,28.711598205751,16.3689558540448,18.5305260109865,3.23039813075836,5.79669298447841,7.53883736228036,0,0,0,21.9527231010969,6.64938581433969,20.0085969137122,1.67412652294763,0.7813353445238,0.523523743973798,9.99993529652724,2.04913645487534,0.485510353031154,0.125896817975577,0,0,0,0,0,0,0,0,3.6912173332702,0,0.336093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,5.79728977403356,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,1.08245520505607,1.77351905832569,1.01104889002957,0.91347103775248,0.517875767294343,0,0.346970653532272,0.304465478312141,0,0,0,0,0,0,0,0,0.220841518460394,0.484875253135222,0,0,0,1.02182822083437,5.63131085177825,5.39912457894067,7.37007317023775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0.205782136407943,0,6.31991868581911,9.77922047035918,13.3556844715929,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,3.70230793328962,0,0,0.257734922644187,0.201683524623343,1.77902435075896,1.33157938278791,1.42358718463353,1.31759163779209,0.754005626400808,0.795825888164603,1.16978452271472,1.79763881730844,0.648414149624083,1.7922714592893,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.44292937929755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.32977250588296,0,0.120625849856312,0,0,1.7488850197791,0,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,2.54967644990783,2.6590775941495,3.17859939750175,0,0,0,0.108005340821801,0.418176592028937,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0.526139422875686,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0.249810577937946,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr18:66631168..66631175,- | |||
}} |
Revision as of 16:37, 13 September 2013
Short description: | p@chr18:66631168..66631175, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:66631168..66631175, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.24e-18 | 9 |
epithelial cell of alimentary canal | 2.24e-18 | 9 |
epithelial cell | 5.55e-17 | 25 |
endo-epithelial cell | 8.79e-17 | 15 |
endodermal cell | 5.32e-14 | 20 |
brush border epithelial cell | 5.58e-13 | 6 |
gut absorptive cell | 5.58e-13 | 6 |
enterocyte | 5.58e-13 | 6 |
columnar/cuboidal epithelial cell | 5.64e-11 | 7 |
M cell of gut | 4.20e-07 | 3 |
intestinal crypt stem cell | 5.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.12e-28 | 15 |
intestine | 3.02e-26 | 31 |
intestinal mucosa | 1.35e-24 | 13 |
wall of intestine | 1.35e-24 | 13 |
gastrointestinal system mucosa | 1.35e-24 | 13 |
epithelium of mucosa | 2.24e-18 | 9 |
gastrointestinal system epithelium | 2.24e-18 | 9 |
intestinal epithelium | 2.24e-18 | 9 |
organ component layer | 6.32e-16 | 24 |
gastrointestinal system | 3.34e-15 | 47 |
simple columnar epithelium | 1.24e-14 | 11 |
small intestine | 1.49e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.