FFCP PHASE1:Hg19::chr6:31623700..31623709,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55937|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13916|TSSclassifier=S|UniProt=O95445|association_with_transcript=29bp_to_NM_019101,uc003nvl.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_8_at_APOM_5end|id=chr6:31623700..31623709,+|ontology_enrichment_celltype=CL:0000181!2.55e-40!12;CL:0000417!2.55e-40!12;CL:0000668!2.55e-40!12;CL:0000414!2.55e-40!12;CL:0000412!2.55e-40!12;CL:0000182!2.55e-40!12;CL:0000223!1.05e-16!59;CL:0000313!6.22e-09!1;CL:0002563!1.30e-08!4|ontology_enrichment_celltype_v019=CL:0000182;2.37e-44;12!CL:0000313;3.64e-12;1|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-44,12;CL:0000223,2.66e-14,58;CL:0000313,4.81e-12,1|ontology_enrichment_development_v019=UBERON:0004161;4.49e-36;11!UBERON:0009497;1.71e-30;13!UBERON:0003104;3.11e-22;31!UBERON:0001041;4.79e-13;30!CL:0000223;2.08e-10;58|ontology_enrichment_disease=DOID:2152!6.22e-09!1;DOID:305!8.02e-07!106|ontology_enrichment_disease_v019=DOID:2152;3.64e-12;1|ontology_enrichment_disease_v019_2=DOID:2152,4.81e-12,1|ontology_enrichment_uberon=UBERON:0002107!1.47e-39!19;UBERON:0006925!1.47e-39!19;UBERON:0008836!1.47e-39!19;UBERON:0008835!5.92e-34!22;UBERON:0003894!5.92e-34!22;UBERON:0009854!2.07e-32!23;UBERON:0007499!1.08e-29!25;UBERON:0009497!1.08e-29!25;UBERON:0000015!1.08e-29!25;UBERON:0002423!1.08e-29!25;UBERON:0006235!1.08e-29!25;UBERON:0004161!1.08e-29!25;UBERON:0005057!1.72e-28!26;UBERON:0009856!1.72e-28!26;UBERON:0002365!1.22e-23!31;UBERON:0002330!1.22e-23!31;UBERON:0003929!5.04e-22!54;UBERON:0002368!9.34e-21!35;UBERON:0005172!2.51e-18!55;UBERON:0005173!2.51e-18!55;UBERON:0002417!2.57e-16!61;UBERON:0000916!2.57e-16!61;UBERON:0000949!8.75e-16!45;UBERON:0002530!3.69e-14!59;UBERON:0005911!1.05e-13!82;UBERON:0004921!1.31e-10!129;UBERON:0004185!1.31e-10!129;UBERON:0004911!6.22e-09!1;UBERON:0001242!1.30e-08!4;UBERON:0001262!1.30e-08!4;UBERON:0004786!1.30e-08!4;UBERON:0004808!1.30e-08!4;UBERON:0001277!1.30e-08!4;UBERON:0005177!2.16e-08!107;UBERON:0001007!2.21e-08!155;UBERON:0001555!2.21e-08!155;UBERON:0007026!2.21e-08!155;UBERON:0009569!7.80e-08!113;UBERON:0004119!1.82e-07!169;UBERON:0000925!1.82e-07!169;UBERON:0006595!1.82e-07!169;UBERON:0000490!3.40e-07!138;UBERON:0003350!4.70e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;3.22e-46;19!UBERON:0006925;3.22e-46;19!UBERON:0002423;6.66e-35;25!UBERON:0002365;4.14e-27;31!UBERON:0002330;4.14e-27;31!UBERON:0002368;9.15e-24;33!UBERON:0000949;5.05e-17;43!UBERON:0005172;9.20e-16;52!UBERON:0005173;9.20e-16;52!UBERON:0002417;5.46e-13;58!UBERON:0000916;5.46e-13;58!UBERON:0004911;3.64e-12;1!UBERON:0002530;8.78e-11;57!UBERON:0001007;2.01e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.06e-46,19;UBERON:0006925,3.06e-46,19;UBERON:0008836,3.06e-46,19;UBERON:0008835,8.24e-40,22;UBERON:0003894,8.24e-40,22;UBERON:0009854,4.87e-38,23;UBERON:0007499,6.40e-35,25;UBERON:0009497,6.40e-35,25;UBERON:0000015,6.40e-35,25;UBERON:0002423,6.40e-35,25;UBERON:0006235,6.40e-35,25;UBERON:0004161,6.40e-35,25;UBERON:0009856,1.54e-33,26;UBERON:0002365,5.67e-28,31;UBERON:0002330,5.67e-28,31;UBERON:0002368,1.16e-24,35;UBERON:0003929,2.35e-23,54;UBERON:0005172,2.40e-23,54;UBERON:0005173,2.40e-23,54;UBERON:0002417,7.22e-21,60;UBERON:0000916,7.22e-21,60;UBERON:0000949,5.98e-19,45;UBERON:0002530,1.58e-17,59;UBERON:0005911,7.03e-15,82;UBERON:0004911,4.81e-12,1;UBERON:0005177,8.64e-12,101;UBERON:0009569,1.76e-10,112;UBERON:0004921,8.91e-10,118;UBERON:0001041,2.90e-09,87;UBERON:0003104,2.79e-08,160;UBERON:0009142,2.79e-08,160;UBERON:0005256,8.76e-08,122;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0000490,1.49e-07,148;UBERON:0004119,8.17e-07,160;UBERON:0000925,8.17e-07,160;UBERON:0006595,8.17e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10818394441079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.87285243752816,7.86261773342101,1.77236972004421,0,2.7057456479485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44936295511323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.5670858706869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13916 | |||
|TSSclassifier=S | |||
|UniProt=O95445 | |||
|association_with_transcript=29bp_to_NM_019101,uc003nvl.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_APOM_5end | |||
|id=chr6:31623700..31623709,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.55e-40!12;CL:0000417!2.55e-40!12;CL:0000668!2.55e-40!12;CL:0000414!2.55e-40!12;CL:0000412!2.55e-40!12;CL:0000182!2.55e-40!12;CL:0000223!1.05e-16!59;CL:0000313!6.22e-09!1;CL:0002563!1.30e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.37e-44;12!CL:0000313;3.64e-12;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.22e-44,12;CL:0000223,2.66e-14,58;CL:0000313,4.81e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.49e-36;11!UBERON:0009497;1.71e-30;13!UBERON:0003104;3.11e-22;31!UBERON:0001041;4.79e-13;30!CL:0000223;2.08e-10;58 | |||
|ontology_enrichment_disease=DOID:2152!6.22e-09!1;DOID:305!8.02e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;3.64e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.81e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.47e-39!19;UBERON:0006925!1.47e-39!19;UBERON:0008836!1.47e-39!19;UBERON:0008835!5.92e-34!22;UBERON:0003894!5.92e-34!22;UBERON:0009854!2.07e-32!23;UBERON:0007499!1.08e-29!25;UBERON:0009497!1.08e-29!25;UBERON:0000015!1.08e-29!25;UBERON:0002423!1.08e-29!25;UBERON:0006235!1.08e-29!25;UBERON:0004161!1.08e-29!25;UBERON:0005057!1.72e-28!26;UBERON:0009856!1.72e-28!26;UBERON:0002365!1.22e-23!31;UBERON:0002330!1.22e-23!31;UBERON:0003929!5.04e-22!54;UBERON:0002368!9.34e-21!35;UBERON:0005172!2.51e-18!55;UBERON:0005173!2.51e-18!55;UBERON:0002417!2.57e-16!61;UBERON:0000916!2.57e-16!61;UBERON:0000949!8.75e-16!45;UBERON:0002530!3.69e-14!59;UBERON:0005911!1.05e-13!82;UBERON:0004921!1.31e-10!129;UBERON:0004185!1.31e-10!129;UBERON:0004911!6.22e-09!1;UBERON:0001242!1.30e-08!4;UBERON:0001262!1.30e-08!4;UBERON:0004786!1.30e-08!4;UBERON:0004808!1.30e-08!4;UBERON:0001277!1.30e-08!4;UBERON:0005177!2.16e-08!107;UBERON:0001007!2.21e-08!155;UBERON:0001555!2.21e-08!155;UBERON:0007026!2.21e-08!155;UBERON:0009569!7.80e-08!113;UBERON:0004119!1.82e-07!169;UBERON:0000925!1.82e-07!169;UBERON:0006595!1.82e-07!169;UBERON:0000490!3.40e-07!138;UBERON:0003350!4.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.22e-46;19!UBERON:0006925;3.22e-46;19!UBERON:0002423;6.66e-35;25!UBERON:0002365;4.14e-27;31!UBERON:0002330;4.14e-27;31!UBERON:0002368;9.15e-24;33!UBERON:0000949;5.05e-17;43!UBERON:0005172;9.20e-16;52!UBERON:0005173;9.20e-16;52!UBERON:0002417;5.46e-13;58!UBERON:0000916;5.46e-13;58!UBERON:0004911;3.64e-12;1!UBERON:0002530;8.78e-11;57!UBERON:0001007;2.01e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.06e-46,19;UBERON:0006925,3.06e-46,19;UBERON:0008836,3.06e-46,19;UBERON:0008835,8.24e-40,22;UBERON:0003894,8.24e-40,22;UBERON:0009854,4.87e-38,23;UBERON:0007499,6.40e-35,25;UBERON:0009497,6.40e-35,25;UBERON:0000015,6.40e-35,25;UBERON:0002423,6.40e-35,25;UBERON:0006235,6.40e-35,25;UBERON:0004161,6.40e-35,25;UBERON:0009856,1.54e-33,26;UBERON:0002365,5.67e-28,31;UBERON:0002330,5.67e-28,31;UBERON:0002368,1.16e-24,35;UBERON:0003929,2.35e-23,54;UBERON:0005172,2.40e-23,54;UBERON:0005173,2.40e-23,54;UBERON:0002417,7.22e-21,60;UBERON:0000916,7.22e-21,60;UBERON:0000949,5.98e-19,45;UBERON:0002530,1.58e-17,59;UBERON:0005911,7.03e-15,82;UBERON:0004911,4.81e-12,1;UBERON:0005177,8.64e-12,101;UBERON:0009569,1.76e-10,112;UBERON:0004921,8.91e-10,118;UBERON:0001041,2.90e-09,87;UBERON:0003104,2.79e-08,160;UBERON:0009142,2.79e-08,160;UBERON:0005256,8.76e-08,122;UBERON:0001007,1.12e-07,145;UBERON:0001555,1.12e-07,145;UBERON:0007026,1.12e-07,145;UBERON:0000490,1.49e-07,148;UBERON:0004119,8.17e-07,160;UBERON:0000925,8.17e-07,160;UBERON:0006595,8.17e-07,160 | |||
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|short_description=p8@APOM | |||
}} |
Revision as of 20:15, 13 September 2013
Short description: | p8@APOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_APOM_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 29bp_to_NM_019101, uc003nvl.2_5end |
EntrezGene: | APOM |
HGNC: | 13916 |
UniProt: | O95445 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.22e-44 | 12 |
endodermal cell | 2.66e-14 | 58 |
serous secreting cell | 4.81e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.81e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.