FFCP PHASE1:Hg19::chr6:41691289..41691312,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7942|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11753|TSSclassifier=N|UniProt=B1AKB2,B1AKA9|association_with_transcript=151bp_to_ENST00000416140,uc003oqy.1_5end|coexpression_cluster_id=C71|description=CAGE_peak_9_at_TFEB_5end|id=chr6:41691289..41691312,-|ontology_enrichment_celltype=CL:0000738!3.31e-43!140;CL:0002087!8.15e-40!119;CL:0000766!1.56e-34!76;CL:0002031!7.58e-32!124;CL:0002194!1.64e-31!63;CL:0000576!1.64e-31!63;CL:0000040!1.64e-31!63;CL:0000559!1.64e-31!63;CL:0000037!9.94e-31!172;CL:0000566!9.94e-31!172;CL:0002009!4.91e-30!65;CL:0002032!8.63e-28!165;CL:0000837!8.63e-28!165;CL:0000988!1.69e-27!182;CL:0000839!1.01e-26!70;CL:0000557!4.05e-26!71;CL:0000860!2.17e-21!45;CL:0002057!3.28e-19!42;CL:0000763!3.53e-19!112;CL:0000049!3.53e-19!112;CL:0000945!7.22e-18!24;CL:0000826!7.22e-18!24;CL:0000235!5.19e-10!10;CL:0000236!1.21e-09!14;CL:0000094!2.67e-08!8;CL:0000542!3.43e-08!53;CL:0000051!3.43e-08!53;CL:0000134!3.97e-08!358;CL:0000838!1.18e-07!52;CL:0002320!1.62e-07!365;CL:0002393!1.71e-07!9;CL:0002397!1.71e-07!9|ontology_enrichment_celltype_v019=CL:0000945;8.24e-30;24!CL:0000235;1.31e-20;6!CL:0000236;1.57e-17;13!CL:0000094;1.51e-14;8!CL:0000775;2.43e-11;3!CL:0000081;2.26e-10;11!CL:0002619;5.52e-10;3!CL:0000226;1.86e-09;3!CL:0000842;1.86e-09;3!CL:0000766;2.53e-09;69!CL:0000542;7.55e-09;53!CL:0000738;1.19e-08;136!CL:0002087;2.18e-08;104!CL:0000473;6.34e-08;39!CL:0000234;6.34e-08;39|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-36,136;CL:0002087,1.66e-31,115;CL:0000945,5.34e-30,24;CL:0000826,5.34e-30,24;CL:0000037,3.44e-27,168;CL:0000988,2.99e-25,177;CL:0002031,8.99e-25,120;CL:0002032,1.91e-24,161;CL:0000837,1.91e-24,161;CL:0000766,4.31e-21,72;CL:0000235,1.22e-20,6;CL:0000236,2.83e-16,14;CL:0000094,1.02e-14,8;CL:0002194,2.31e-14,59;CL:0000576,2.31e-14,59;CL:0000040,2.31e-14,59;CL:0000559,2.31e-14,59;CL:0002009,9.58e-14,61;CL:0000838,2.69e-13,52;CL:0000542,5.73e-13,53;CL:0000051,5.73e-13,53;CL:0000839,2.29e-12,66;CL:0000557,4.08e-12,67;CL:0000763,5.40e-12,108;CL:0000049,5.40e-12,108;CL:0000473,1.87e-11,48;CL:0000234,1.87e-11,48;CL:0000775,2.44e-11,3;CL:0000081,1.72e-10,11;CL:0002619,6.78e-10,3;CL:0000226,3.01e-09,3;CL:0000842,3.01e-09,3;CL:0000134,4.10e-09,354;CL:0002320,1.00e-08,361;CL:0000219,2.25e-07,386|ontology_enrichment_development_v019=CL:0000051;7.55e-09;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.14e-33!102;UBERON:0003061!1.14e-33!102;UBERON:0002193!1.82e-31!112;UBERON:0002371!2.17e-21!80;UBERON:0002405!3.68e-20!115;UBERON:0001474!8.10e-19!86;UBERON:0004765!7.92e-14!101;UBERON:0001434!7.92e-14!101;UBERON:0000178!2.24e-11!15;UBERON:0000179!2.24e-11!15;UBERON:0000463!2.24e-11!15;UBERON:0007023!1.51e-10!115;UBERON:0003081!8.13e-10!216;UBERON:0002384!5.24e-07!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-27;15!UBERON:0000179;1.45e-27;15!UBERON:0000463;1.45e-27;15!UBERON:0002390;4.16e-15;32!UBERON:0002193;7.08e-12;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.54e-27,15;UBERON:0000179,1.54e-27,15;UBERON:0000463,1.54e-27,15;UBERON:0002193,1.02e-26,108;UBERON:0002390,2.18e-26,98;UBERON:0003061,2.18e-26,98;UBERON:0002405,4.69e-12,93;UBERON:0002371,3.67e-10,76;UBERON:0003081,2.59e-09,203;UBERON:0001474,4.21e-09,82;UBERON:0002384,3.36e-08,371;UBERON:0004765,6.46e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36881557818649,2.46301768349837,2.51874500203774,1.57345710739562,0.383829398097213,1.85779347979291,0,0,0,0.0774672005803016,0.710846162437108,0,2.21598163412751,1.60435557976113,3.68918480216948,1.11957737119962,4.21061765824673,1.54545340580512,2.32637182047304,0.755751887377619,1.94067248950253,0.697287110717054,0.411167888021826,0.619412741790207,0.28769239232215,0,0.47296445977717,0.344745680736619,0,0,0.941211697713023,0.818718450173537,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0.598390972864896,0,0.870627715885752,0,0.622822248995575,0,1.0429658368404,0.65156653411535,0,0,0.949387162322653,0.633765858935825,0.425208599930087,0.209658645508376,1.23561494261145,1.35159203557356,1.6072558669708,0,0.19891667719909,0.365328307529268,0,2.18455444504853,4.44754626931777,1.70692089026603,2.40237592221607,1.14950487990897,1.98313461835459,0.954053754535364,1.70763890732835,1.17447437874188,1.52909291250092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.398873881556595,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185176890317059,0,1.039934785279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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7942 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11753 | |||
|TSSclassifier=N | |||
|UniProt=B1AKB2,B1AKA9 | |||
|association_with_transcript=151bp_to_ENST00000416140,uc003oqy.1_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_9_at_TFEB_5end | |||
|id=chr6:41691289..41691312,- | |||
|ontology_enrichment_celltype=CL:0000738!3.31e-43!140;CL:0002087!8.15e-40!119;CL:0000766!1.56e-34!76;CL:0002031!7.58e-32!124;CL:0002194!1.64e-31!63;CL:0000576!1.64e-31!63;CL:0000040!1.64e-31!63;CL:0000559!1.64e-31!63;CL:0000037!9.94e-31!172;CL:0000566!9.94e-31!172;CL:0002009!4.91e-30!65;CL:0002032!8.63e-28!165;CL:0000837!8.63e-28!165;CL:0000988!1.69e-27!182;CL:0000839!1.01e-26!70;CL:0000557!4.05e-26!71;CL:0000860!2.17e-21!45;CL:0002057!3.28e-19!42;CL:0000763!3.53e-19!112;CL:0000049!3.53e-19!112;CL:0000945!7.22e-18!24;CL:0000826!7.22e-18!24;CL:0000235!5.19e-10!10;CL:0000236!1.21e-09!14;CL:0000094!2.67e-08!8;CL:0000542!3.43e-08!53;CL:0000051!3.43e-08!53;CL:0000134!3.97e-08!358;CL:0000838!1.18e-07!52;CL:0002320!1.62e-07!365;CL:0002393!1.71e-07!9;CL:0002397!1.71e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000945;8.24e-30;24!CL:0000235;1.31e-20;6!CL:0000236;1.57e-17;13!CL:0000094;1.51e-14;8!CL:0000775;2.43e-11;3!CL:0000081;2.26e-10;11!CL:0002619;5.52e-10;3!CL:0000226;1.86e-09;3!CL:0000842;1.86e-09;3!CL:0000766;2.53e-09;69!CL:0000542;7.55e-09;53!CL:0000738;1.19e-08;136!CL:0002087;2.18e-08;104!CL:0000473;6.34e-08;39!CL:0000234;6.34e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.67e-36,136;CL:0002087,1.66e-31,115;CL:0000945,5.34e-30,24;CL:0000826,5.34e-30,24;CL:0000037,3.44e-27,168;CL:0000988,2.99e-25,177;CL:0002031,8.99e-25,120;CL:0002032,1.91e-24,161;CL:0000837,1.91e-24,161;CL:0000766,4.31e-21,72;CL:0000235,1.22e-20,6;CL:0000236,2.83e-16,14;CL:0000094,1.02e-14,8;CL:0002194,2.31e-14,59;CL:0000576,2.31e-14,59;CL:0000040,2.31e-14,59;CL:0000559,2.31e-14,59;CL:0002009,9.58e-14,61;CL:0000838,2.69e-13,52;CL:0000542,5.73e-13,53;CL:0000051,5.73e-13,53;CL:0000839,2.29e-12,66;CL:0000557,4.08e-12,67;CL:0000763,5.40e-12,108;CL:0000049,5.40e-12,108;CL:0000473,1.87e-11,48;CL:0000234,1.87e-11,48;CL:0000775,2.44e-11,3;CL:0000081,1.72e-10,11;CL:0002619,6.78e-10,3;CL:0000226,3.01e-09,3;CL:0000842,3.01e-09,3;CL:0000134,4.10e-09,354;CL:0002320,1.00e-08,361;CL:0000219,2.25e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000051;7.55e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.14e-33!102;UBERON:0003061!1.14e-33!102;UBERON:0002193!1.82e-31!112;UBERON:0002371!2.17e-21!80;UBERON:0002405!3.68e-20!115;UBERON:0001474!8.10e-19!86;UBERON:0004765!7.92e-14!101;UBERON:0001434!7.92e-14!101;UBERON:0000178!2.24e-11!15;UBERON:0000179!2.24e-11!15;UBERON:0000463!2.24e-11!15;UBERON:0007023!1.51e-10!115;UBERON:0003081!8.13e-10!216;UBERON:0002384!5.24e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.45e-27;15!UBERON:0000179;1.45e-27;15!UBERON:0000463;1.45e-27;15!UBERON:0002390;4.16e-15;32!UBERON:0002193;7.08e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.54e-27,15;UBERON:0000179,1.54e-27,15;UBERON:0000463,1.54e-27,15;UBERON:0002193,1.02e-26,108;UBERON:0002390,2.18e-26,98;UBERON:0003061,2.18e-26,98;UBERON:0002405,4.69e-12,93;UBERON:0002371,3.67e-10,76;UBERON:0003081,2.59e-09,203;UBERON:0001474,4.21e-09,82;UBERON:0002384,3.36e-08,371;UBERON:0004765,6.46e-08,90 | |||
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|short_description=p9@TFEB | |||
}} |
Revision as of 20:59, 13 September 2013
Short description: | p9@TFEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_TFEB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 151bp_to_ENST00000416140, uc003oqy.1_5end |
EntrezGene: | TFEB |
HGNC: | 11753 |
UniProt: | B1AKB2B1AKA9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.54e-27 | 15 |
haemolymphatic fluid | 1.54e-27 | 15 |
organism substance | 1.54e-27 | 15 |
hemolymphoid system | 1.02e-26 | 108 |
hematopoietic system | 2.18e-26 | 98 |
blood island | 2.18e-26 | 98 |
immune system | 4.69e-12 | 93 |
bone marrow | 3.67e-10 | 76 |
lateral plate mesoderm | 2.59e-09 | 203 |
bone element | 4.21e-09 | 82 |
connective tissue | 3.36e-08 | 371 |
skeletal element | 6.46e-08 | 90 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.