FFCP PHASE1:Hg19::chr6:90062488..90062504,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51465 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17598 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-9bp_to_uc010kcb.2_5end | |||
|coexpression_cluster_id=C4473 | |||
|description=CAGE_peak_3_at_UBE2J1_5end | |||
|id=chr6:90062488..90062504,- | |||
|ontology_enrichment_celltype=CL:0000738!3.61e-27!140;CL:0000766!5.72e-25!76;CL:0002087!1.62e-22!119;CL:0000557!3.02e-21!71;CL:0002031!1.48e-20!124;CL:0000037!1.50e-20!172;CL:0000566!1.50e-20!172;CL:0002009!2.49e-20!65;CL:0000988!4.54e-20!182;CL:0002194!1.06e-19!63;CL:0000576!1.06e-19!63;CL:0000040!1.06e-19!63;CL:0000559!1.06e-19!63;CL:0002057!3.62e-19!42;CL:0000839!3.59e-18!70;CL:0002032!3.66e-18!165;CL:0000837!3.66e-18!165;CL:0000860!3.14e-16!45;CL:0000763!1.81e-14!112;CL:0000049!1.81e-14!112;CL:0000134!2.54e-11!358;CL:0002320!6.01e-11!365;CL:0000945!9.85e-10!24;CL:0000826!9.85e-10!24;CL:0000048!1.36e-09!430;CL:0000723!2.52e-08!436;CL:0000034!1.49e-07!444;CL:0000219!5.36e-07!390;CL:0000081!9.35e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.29e-14;33!CL:0002057;1.29e-14;33!CL:0000473;4.78e-13;39!CL:0000234;4.78e-13;39!CL:0000576;1.56e-12;48!CL:0000766;1.98e-12;69!CL:0000945;1.24e-09;24!CL:0002087;2.10e-07;104!CL:0000081;8.37e-07;11!CL:0000094;9.90e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.65e-28,136;CL:0000766,4.63e-27,72;CL:0002087,7.67e-24,115;CL:0000557,3.47e-23,67;CL:0002009,2.39e-22,61;CL:0002031,9.50e-22,120;CL:0002194,1.01e-21,59;CL:0000576,1.01e-21,59;CL:0000040,1.01e-21,59;CL:0000559,1.01e-21,59;CL:0000037,1.79e-21,168;CL:0000988,1.13e-20,177;CL:0000839,6.77e-20,66;CL:0000473,1.61e-19,48;CL:0000234,1.61e-19,48;CL:0000860,3.62e-19,42;CL:0002057,3.62e-19,42;CL:0002032,4.93e-19,161;CL:0000837,4.93e-19,161;CL:0000763,1.88e-15,108;CL:0000049,1.88e-15,108;CL:0000134,8.28e-12,354;CL:0002320,2.02e-11,361;CL:0000048,8.23e-10,427;CL:0000945,9.84e-10,24;CL:0000826,9.84e-10,24;CL:0000723,1.59e-08,433;CL:0000034,9.66e-08,441;CL:0000219,2.40e-07,386;CL:0000081,9.35e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.88e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.32e-22!112;UBERON:0002390!6.16e-21!102;UBERON:0003061!6.16e-21!102;UBERON:0002371!1.32e-18!80;UBERON:0002405!1.95e-18!115;UBERON:0001474!1.04e-17!86;UBERON:0003081!3.57e-15!216;UBERON:0004765!7.77e-15!101;UBERON:0001434!7.77e-15!101;UBERON:0002384!2.49e-11!375;UBERON:0002204!4.92e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p3@UBE2J1 | |||
}} |
Revision as of 22:06, 13 September 2013
Short description: | p3@UBE2J1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_UBE2J1_5end |
Coexpression cluster: | C4473_Neutrophils_CD14_Eosinophils_lymphangiectasia_Dendritic_myeloma_Burkitt |
Association with transcript: | -9bp_to_uc010kcb.2_5end |
EntrezGene: | UBE2J1 |
HGNC: | 17598 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.65e-28 | 136 |
myeloid leukocyte | 4.63e-27 | 72 |
nongranular leukocyte | 7.67e-24 | 115 |
granulocyte monocyte progenitor cell | 3.47e-23 | 67 |
macrophage dendritic cell progenitor | 2.39e-22 | 61 |
hematopoietic lineage restricted progenitor cell | 9.50e-22 | 120 |
monopoietic cell | 1.01e-21 | 59 |
monocyte | 1.01e-21 | 59 |
monoblast | 1.01e-21 | 59 |
promonocyte | 1.01e-21 | 59 |
hematopoietic stem cell | 1.79e-21 | 168 |
hematopoietic cell | 1.13e-20 | 177 |
myeloid lineage restricted progenitor cell | 6.77e-20 | 66 |
defensive cell | 1.61e-19 | 48 |
phagocyte | 1.61e-19 | 48 |
classical monocyte | 3.62e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.62e-19 | 42 |
hematopoietic oligopotent progenitor cell | 4.93e-19 | 161 |
hematopoietic multipotent progenitor cell | 4.93e-19 | 161 |
myeloid cell | 1.88e-15 | 108 |
common myeloid progenitor | 1.88e-15 | 108 |
mesenchymal cell | 8.28e-12 | 354 |
connective tissue cell | 2.02e-11 | 361 |
multi fate stem cell | 8.23e-10 | 427 |
lymphocyte of B lineage | 9.84e-10 | 24 |
pro-B cell | 9.84e-10 | 24 |
somatic stem cell | 1.59e-08 | 433 |
stem cell | 9.66e-08 | 441 |
motile cell | 2.40e-07 | 386 |
blood cell | 9.35e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.66e-23 | 108 |
hematopoietic system | 2.36e-22 | 98 |
blood island | 2.36e-22 | 98 |
immune system | 3.80e-21 | 93 |
bone marrow | 3.52e-20 | 76 |
bone element | 3.93e-19 | 82 |
skeletal element | 1.33e-17 | 90 |
lateral plate mesoderm | 2.01e-16 | 203 |
skeletal system | 1.21e-15 | 100 |
connective tissue | 8.32e-12 | 371 |
musculoskeletal system | 3.03e-10 | 167 |
mesoderm | 8.24e-08 | 315 |
mesoderm-derived structure | 8.24e-08 | 315 |
presumptive mesoderm | 8.24e-08 | 315 |
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