FFCP PHASE1:Mm9::chr2:25174713..25174724,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14810|HGNC=|MCL_coexpression_id=742|UniProt=P35438|association_with_transcript=-6bp_to_ENSMUST00000114312_5end|description=CAGE_peak_2_at_Grin1_5end|id=chr2:25174713..25174724,-|ontology_enrichment_celltype=CL:0000117!4.72e-18!23;CL:0000337!4.72e-18!23;CL:0000540!4.43e-17!33;CL:0000047!4.43e-17!33;CL:0000031!4.43e-17!33;CL:0000404!4.43e-17!33;CL:0000393!1.05e-12!39;CL:0000211!1.05e-12!39;CL:0000221!3.97e-12!44;CL:0000133!3.97e-12!44;CL:0002319!7.03e-12!43;CL:0000055!1.02e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.69e-24,23;CL:0000337,9.69e-24,23;CL:0000540,2.57e-16,33;CL:0000047,2.57e-16,33;CL:0000031,2.57e-16,33;CL:0000404,2.57e-16,33;CL:0000393,7.24e-13,39;CL:0000211,7.24e-13,39;CL:0002319,4.06e-11,43;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.22e-31!71;UBERON:0003075!1.22e-31!71;UBERON:0007284!1.22e-31!71;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0001017!7.77e-31!73;UBERON:0005743!7.77e-31!73;UBERON:0004121!6.72e-30!102;UBERON:0000924!6.72e-30!102;UBERON:0006601!6.72e-30!102;UBERON:0001049!1.68e-27!52;UBERON:0005068!1.68e-27!52;UBERON:0006241!1.68e-27!52;UBERON:0007135!1.68e-27!52;UBERON:0000955!2.14e-25!50;UBERON:0006238!2.14e-25!50;UBERON:0000033!9.13e-25!63;UBERON:0002616!1.53e-24!49;UBERON:0002020!1.54e-22!34;UBERON:0003056!4.49e-20!49;UBERON:0003080!8.86e-20!40;UBERON:0002780!6.44e-19!39;UBERON:0001890!6.44e-19!39;UBERON:0006240!6.44e-19!39;UBERON:0002791!9.47e-18!29;UBERON:0003528!9.47e-18!29;UBERON:0001893!9.47e-18!29;UBERON:0007811!1.23e-13!86;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0000153!5.55e-11!94;UBERON:0002619!1.76e-09!17;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0003076!3.30e-08!12;UBERON:0003057!3.30e-08!12;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8;UBERON:0002240!4.61e-07!6;UBERON:0005174!4.61e-07!6;UBERON:0001137!4.61e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-41,54;UBERON:0001017,1.31e-38,73;UBERON:0001049,2.67e-38,52;UBERON:0005068,2.67e-38,52;UBERON:0006241,2.67e-38,52;UBERON:0007135,2.67e-38,52;UBERON:0001016,3.10e-37,75;UBERON:0002346,4.26e-34,64;UBERON:0003075,4.26e-34,64;UBERON:0007284,4.26e-34,64;UBERON:0002020,2.16e-32,34;UBERON:0000955,1.90e-30,47;UBERON:0006238,1.90e-30,47;UBERON:0004121,2.08e-29,95;UBERON:0000924,2.08e-29,95;UBERON:0006601,2.08e-29,95;UBERON:0002616,3.99e-29,46;UBERON:0010371,2.00e-28,73;UBERON:0003080,4.28e-25,40;UBERON:0003528,1.38e-24,29;UBERON:0002791,1.38e-24,29;UBERON:0001893,1.38e-24,29;UBERON:0002780,9.47e-24,39;UBERON:0001890,9.47e-24,39;UBERON:0006240,9.47e-24,39;UBERON:0003056,6.47e-22,49;UBERON:0010314,3.18e-21,92;UBERON:0000956,1.88e-14,21;UBERON:0001869,1.88e-14,21;UBERON:0000203,1.88e-14,21;UBERON:0002619,3.83e-14,17;UBERON:0003076,1.44e-13,12;UBERON:0003057,1.44e-13,12;UBERON:0002021,1.69e-13,10;UBERON:0000411,1.69e-13,10;UBERON:0001950,1.69e-13,10;UBERON:0002420,6.72e-12,8;UBERON:0007245,6.72e-12,8;UBERON:0010009,6.72e-12,8;UBERON:0010011,6.72e-12,8;UBERON:0000454,6.72e-12,8;UBERON:0000025,1.82e-11,114;UBERON:0002240,8.18e-11,6;UBERON:0005174,8.18e-11,6;UBERON:0001137,8.18e-11,6;UBERON:0004111,4.95e-10,122;UBERON:0001948,2.44e-09,5;UBERON:0002315,2.44e-09,5;UBERON:0000369,1.47e-07,5;UBERON:0002435,1.47e-07,5;UBERON:0000204,1.47e-07,5;UBERON:0010082,1.47e-07,5;UBERON:0002950,2.39e-07,4;UBERON:0001891,2.39e-07,4;UBERON:0009616,2.39e-07,4;UBERON:0010286,2.39e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,5.07065122804943,0,0,0,0,0,0,0,0.622137673850866,1.89008313664367,0.420649922702764,18.852964970651,16.7860091123226,1.34739879136449,0.383381884072945,1.83843757322004,9.91042928994498,9.3211756802187,11.5204899942183,4.74790635828698,4.02545631850602,6.25096044668112,8.09630697104005,10.6924895906019,9.0150966188318,11.490514833473,12.5287079103211,8.20157561631323,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,25.4719293400046,19.8974371472782,0,0,0,0,8.53806644607489,7.77751024791665,5.6544458450789,7.64827008846016,4.85859368927628,9.76603809429932,7.94982189032012,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.680364991513279,0.896796041993948,1.3118241438362,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,5.45394445610208,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16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| ||
|EntrezGene=14810 | |||
|HGNC= | |||
|MCL_coexpression_id=742 | |||
|UniProt=P35438 | |||
|association_with_transcript=-6bp_to_ENSMUST00000114312_5end | |||
|description=CAGE_peak_2_at_Grin1_5end | |||
|id=chr2:25174713..25174724,- | |||
|ontology_enrichment_celltype=CL:0000117!4.72e-18!23;CL:0000337!4.72e-18!23;CL:0000540!4.43e-17!33;CL:0000047!4.43e-17!33;CL:0000031!4.43e-17!33;CL:0000404!4.43e-17!33;CL:0000393!1.05e-12!39;CL:0000211!1.05e-12!39;CL:0000221!3.97e-12!44;CL:0000133!3.97e-12!44;CL:0002319!7.03e-12!43;CL:0000055!1.02e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.69e-24,23;CL:0000337,9.69e-24,23;CL:0000540,2.57e-16,33;CL:0000047,2.57e-16,33;CL:0000031,2.57e-16,33;CL:0000404,2.57e-16,33;CL:0000393,7.24e-13,39;CL:0000211,7.24e-13,39;CL:0002319,4.06e-11,43;CL:0000221,9.85e-11,44;CL:0000133,9.85e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.22e-31!71;UBERON:0003075!1.22e-31!71;UBERON:0007284!1.22e-31!71;UBERON:0000073!3.16e-31!75;UBERON:0001016!3.16e-31!75;UBERON:0001017!7.77e-31!73;UBERON:0005743!7.77e-31!73;UBERON:0004121!6.72e-30!102;UBERON:0000924!6.72e-30!102;UBERON:0006601!6.72e-30!102;UBERON:0001049!1.68e-27!52;UBERON:0005068!1.68e-27!52;UBERON:0006241!1.68e-27!52;UBERON:0007135!1.68e-27!52;UBERON:0000955!2.14e-25!50;UBERON:0006238!2.14e-25!50;UBERON:0000033!9.13e-25!63;UBERON:0002616!1.53e-24!49;UBERON:0002020!1.54e-22!34;UBERON:0003056!4.49e-20!49;UBERON:0003080!8.86e-20!40;UBERON:0002780!6.44e-19!39;UBERON:0001890!6.44e-19!39;UBERON:0006240!6.44e-19!39;UBERON:0002791!9.47e-18!29;UBERON:0003528!9.47e-18!29;UBERON:0001893!9.47e-18!29;UBERON:0007811!1.23e-13!86;UBERON:0000956!1.83e-11!21;UBERON:0001869!1.83e-11!21;UBERON:0000203!1.83e-11!21;UBERON:0000153!5.55e-11!94;UBERON:0002619!1.76e-09!17;UBERON:0002021!1.15e-08!10;UBERON:0000411!1.15e-08!10;UBERON:0001950!1.15e-08!10;UBERON:0003076!3.30e-08!12;UBERON:0003057!3.30e-08!12;UBERON:0002420!1.03e-07!8;UBERON:0007245!1.03e-07!8;UBERON:0010009!1.03e-07!8;UBERON:0010011!1.03e-07!8;UBERON:0000454!1.03e-07!8;UBERON:0002240!4.61e-07!6;UBERON:0005174!4.61e-07!6;UBERON:0001137!4.61e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.76e-41,54;UBERON:0001017,1.31e-38,73;UBERON:0001049,2.67e-38,52;UBERON:0005068,2.67e-38,52;UBERON:0006241,2.67e-38,52;UBERON:0007135,2.67e-38,52;UBERON:0001016,3.10e-37,75;UBERON:0002346,4.26e-34,64;UBERON:0003075,4.26e-34,64;UBERON:0007284,4.26e-34,64;UBERON:0002020,2.16e-32,34;UBERON:0000955,1.90e-30,47;UBERON:0006238,1.90e-30,47;UBERON:0004121,2.08e-29,95;UBERON:0000924,2.08e-29,95;UBERON:0006601,2.08e-29,95;UBERON:0002616,3.99e-29,46;UBERON:0010371,2.00e-28,73;UBERON:0003080,4.28e-25,40;UBERON:0003528,1.38e-24,29;UBERON:0002791,1.38e-24,29;UBERON:0001893,1.38e-24,29;UBERON:0002780,9.47e-24,39;UBERON:0001890,9.47e-24,39;UBERON:0006240,9.47e-24,39;UBERON:0003056,6.47e-22,49;UBERON:0010314,3.18e-21,92;UBERON:0000956,1.88e-14,21;UBERON:0001869,1.88e-14,21;UBERON:0000203,1.88e-14,21;UBERON:0002619,3.83e-14,17;UBERON:0003076,1.44e-13,12;UBERON:0003057,1.44e-13,12;UBERON:0002021,1.69e-13,10;UBERON:0000411,1.69e-13,10;UBERON:0001950,1.69e-13,10;UBERON:0002420,6.72e-12,8;UBERON:0007245,6.72e-12,8;UBERON:0010009,6.72e-12,8;UBERON:0010011,6.72e-12,8;UBERON:0000454,6.72e-12,8;UBERON:0000025,1.82e-11,114;UBERON:0002240,8.18e-11,6;UBERON:0005174,8.18e-11,6;UBERON:0001137,8.18e-11,6;UBERON:0004111,4.95e-10,122;UBERON:0001948,2.44e-09,5;UBERON:0002315,2.44e-09,5;UBERON:0000369,1.47e-07,5;UBERON:0002435,1.47e-07,5;UBERON:0000204,1.47e-07,5;UBERON:0010082,1.47e-07,5;UBERON:0002950,2.39e-07,4;UBERON:0001891,2.39e-07,4;UBERON:0009616,2.39e-07,4;UBERON:0010286,2.39e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,5.07065122804943,0,0,0,0,0,0,0,0.622137673850866,1.89008313664367,0.420649922702764,18.852964970651,16.7860091123226,1.34739879136449,0.383381884072945,1.83843757322004,9.91042928994498,9.3211756802187,11.5204899942183,4.74790635828698,4.02545631850602,6.25096044668112,8.09630697104005,10.6924895906019,9.0150966188318,11.490514833473,12.5287079103211,8.20157561631323,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,1.03909497345377,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,0.251333182659351,0,0,0,0,0,0,0,25.4719293400046,19.8974371472782,0,0,0,0,8.53806644607489,7.77751024791665,5.6544458450789,7.64827008846016,4.85859368927628,9.76603809429932,7.94982189032012,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.680364991513279,0.896796041993948,1.3118241438362,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.78072809687271,5.45394445610208,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,8.79087649441524,0,0,0.631016438832513,1.95219372148319,0.215423397732799,0,0,0.849229592366497,0,0.292255857911312,0.395287777946524,7.06906896127976,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.632073515871632,0,0,1.70219802876894,0,0,0.214337035031592,0,0.356737635204141,0.822745103010605,1.8267896946876,0,0,0,0,0,0.0603129249281559,0,0,0,9.45669040253599,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0.129614973291793,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,11.8597886949584,6.44455331110048,6.30185064783336,6.18671456437275,4.7955776383945,3.7769694869485,2.02506750069542,4.5032120322422,3.17199686288943,5.69536342927002,0,0,0.341467211508268,1.21553358534147,0.419226325255965,0.735374033800057,0.666740183404846,0.618105171716683,0,0.505394423527595,0.50695859978048,0.943131706930381,1.12369808963859,1.08842759088278,1.20614484806788,0.952587382566147,1.27472758539341,0.77163688185482,1.23625770240992,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,0.726732083161643,0.470546902076653,0.761531471025089,0,0,0.814824683075171,0.561142271657738,1.06771516311757,0.788035859004508,1.63692417267876,1.08455788830176,0.578719832943424,2.24829520144151,0,0.644613162144895,0.382576664137687,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Grin1 | |||
}} |
Revision as of 23:25, 13 September 2013
Short description: | p2@Grin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Grin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:742 |
Association with transcript: | -6bp_to_ENSMUST00000114312_5end |
EntrezGene: | Grin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.69e-24 | 23 |
neuroblast (sensu Vertebrata) | 9.69e-24 | 23 |
neuron | 2.57e-16 | 33 |
neuronal stem cell | 2.57e-16 | 33 |
neuroblast | 2.57e-16 | 33 |
electrically signaling cell | 2.57e-16 | 33 |
electrically responsive cell | 7.24e-13 | 39 |
electrically active cell | 7.24e-13 | 39 |
neural cell | 4.06e-11 | 43 |
ectodermal cell | 9.85e-11 | 44 |
neurectodermal cell | 9.85e-11 | 44 |
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