FFCP PHASE1:Hg19::chr8:125283938..125283961,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=14bp_to_ENST00000517482_5end|coexpression_cluster_id=C575|description=CAGE_peak_2_at_ENST00000517482_5end|id=chr8:125283938..125283961,+|ontology_enrichment_celltype=CL:0000860!3.29e-28!45;CL:0002057!1.21e-25!42;CL:0002194!2.75e-19!63;CL:0000576!2.75e-19!63;CL:0000040!2.75e-19!63;CL:0000559!2.75e-19!63;CL:0002009!2.87e-18!65;CL:0000839!5.39e-16!70;CL:0000557!1.40e-15!71;CL:0000766!1.97e-15!76;CL:0000763!5.50e-07!112;CL:0000049!5.50e-07!112;CL:0000063!5.85e-07!578|ontology_enrichment_celltype_v019=CL:0000860;1.64e-61;33!CL:0002057;1.64e-61;33!CL:0000473;7.73e-47;39!CL:0000234;7.73e-47;39!CL:0000576;2.54e-28;48!CL:0000766;1.94e-16;69!CL:0000763;1.08e-08;100!CL:0002087;7.64e-08;104|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-53,42;CL:0002057,2.03e-53,42;CL:0000473,1.08e-49,48;CL:0000234,1.08e-49,48;CL:0002194,2.08e-38,59;CL:0000576,2.08e-38,59;CL:0000040,2.08e-38,59;CL:0000559,2.08e-38,59;CL:0002009,5.93e-37,61;CL:0000839,1.07e-33,66;CL:0000557,4.22e-33,67;CL:0000766,2.24e-30,72;CL:0000763,3.60e-18,108;CL:0000049,3.60e-18,108;CL:0002087,1.11e-16,115;CL:0002031,9.96e-16,120;CL:0000738,3.78e-13,136;CL:0002032,3.67e-10,161;CL:0000837,3.67e-10,161;CL:0000037,1.73e-09,168;CL:0000988,1.05e-08,177|ontology_enrichment_development_v019=CL:0002057;3.92e-40;42|ontology_enrichment_disease=DOID:305!3.07e-11!106;DOID:0050687!2.71e-09!143;DOID:14566!3.34e-08!239;DOID:162!8.48e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001474!3.50e-15!86;UBERON:0002371!2.72e-14!80;UBERON:0004765!8.89e-13!101;UBERON:0001434!8.89e-13!101;UBERON:0002405!1.15e-09!115;UBERON:0002390!1.78e-08!102;UBERON:0003061!1.78e-08!102;UBERON:0000926!2.06e-08!448;UBERON:0004120!2.06e-08!448;UBERON:0006603!2.06e-08!448;UBERON:0000062!3.03e-07!511;UBERON:0002204!3.99e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.35e-31,76;UBERON:0001474,2.21e-30,82;UBERON:0004765,4.35e-27,90;UBERON:0002405,5.40e-24,93;UBERON:0001434,1.04e-23,100;UBERON:0002390,1.94e-22,98;UBERON:0003061,1.94e-22,98;UBERON:0002193,9.27e-20,108;UBERON:0002204,1.50e-12,167;UBERON:0003081,3.57e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.601633342410425,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,1.62700325833979,3.70051099219643,7.12324653058738,8.05538698502021,1.2808035326455,2.60130452877444,6.20542225325913,9.68227025375739,5.41705946377367,1.88242339542605,2.18324920046277,2.02251136000576,5.81559395504715,3.20929027076094,4.47535988059329,1.31940520074686,0.199463657621632,0.426224750532694,5.5139755339431,6.80862269629368,5.60540024096017,5.02497330513487,3.12889751052121,3.69221035998698,2.42159801053347,9.20694089968912,3.48108626184973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.723280468230358,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.55146986366197,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.763976851116555,0,3.4214489204541,0.102827492703324,0,0.285826432630578,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,1.66435439510497,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.604297247958111,0,0,0.803701137152247,0.364182336013434,0.786746489756545,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.54941678891006,0.907604499126468,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0,0,0,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.222617410045812,0,0,0,0,0,1.124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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000517482_5end | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_2_at_ENST00000517482_5end | |||
|id=chr8:125283938..125283961,+ | |||
|ontology_enrichment_celltype=CL:0000860!3.29e-28!45;CL:0002057!1.21e-25!42;CL:0002194!2.75e-19!63;CL:0000576!2.75e-19!63;CL:0000040!2.75e-19!63;CL:0000559!2.75e-19!63;CL:0002009!2.87e-18!65;CL:0000839!5.39e-16!70;CL:0000557!1.40e-15!71;CL:0000766!1.97e-15!76;CL:0000763!5.50e-07!112;CL:0000049!5.50e-07!112;CL:0000063!5.85e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.64e-61;33!CL:0002057;1.64e-61;33!CL:0000473;7.73e-47;39!CL:0000234;7.73e-47;39!CL:0000576;2.54e-28;48!CL:0000766;1.94e-16;69!CL:0000763;1.08e-08;100!CL:0002087;7.64e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.03e-53,42;CL:0002057,2.03e-53,42;CL:0000473,1.08e-49,48;CL:0000234,1.08e-49,48;CL:0002194,2.08e-38,59;CL:0000576,2.08e-38,59;CL:0000040,2.08e-38,59;CL:0000559,2.08e-38,59;CL:0002009,5.93e-37,61;CL:0000839,1.07e-33,66;CL:0000557,4.22e-33,67;CL:0000766,2.24e-30,72;CL:0000763,3.60e-18,108;CL:0000049,3.60e-18,108;CL:0002087,1.11e-16,115;CL:0002031,9.96e-16,120;CL:0000738,3.78e-13,136;CL:0002032,3.67e-10,161;CL:0000837,3.67e-10,161;CL:0000037,1.73e-09,168;CL:0000988,1.05e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.92e-40;42 | |||
|ontology_enrichment_disease=DOID:305!3.07e-11!106;DOID:0050687!2.71e-09!143;DOID:14566!3.34e-08!239;DOID:162!8.48e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!3.50e-15!86;UBERON:0002371!2.72e-14!80;UBERON:0004765!8.89e-13!101;UBERON:0001434!8.89e-13!101;UBERON:0002405!1.15e-09!115;UBERON:0002390!1.78e-08!102;UBERON:0003061!1.78e-08!102;UBERON:0000926!2.06e-08!448;UBERON:0004120!2.06e-08!448;UBERON:0006603!2.06e-08!448;UBERON:0000062!3.03e-07!511;UBERON:0002204!3.99e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.35e-31,76;UBERON:0001474,2.21e-30,82;UBERON:0004765,4.35e-27,90;UBERON:0002405,5.40e-24,93;UBERON:0001434,1.04e-23,100;UBERON:0002390,1.94e-22,98;UBERON:0003061,1.94e-22,98;UBERON:0002193,9.27e-20,108;UBERON:0002204,1.50e-12,167;UBERON:0003081,3.57e-09,203 | |||
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| |||
|short_description=p2@ENST00000517482 | |||
}} |
Revision as of 03:25, 14 September 2013
Short description: | p2@ENST00000517482 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000517482_5end |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | 14bp_to_ENST00000517482_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.03e-53 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.03e-53 | 42 |
defensive cell | 1.08e-49 | 48 |
phagocyte | 1.08e-49 | 48 |
monopoietic cell | 2.08e-38 | 59 |
monocyte | 2.08e-38 | 59 |
monoblast | 2.08e-38 | 59 |
promonocyte | 2.08e-38 | 59 |
macrophage dendritic cell progenitor | 5.93e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.07e-33 | 66 |
granulocyte monocyte progenitor cell | 4.22e-33 | 67 |
myeloid leukocyte | 2.24e-30 | 72 |
myeloid cell | 3.60e-18 | 108 |
common myeloid progenitor | 3.60e-18 | 108 |
nongranular leukocyte | 1.11e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 9.96e-16 | 120 |
leukocyte | 3.78e-13 | 136 |
hematopoietic oligopotent progenitor cell | 3.67e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.67e-10 | 161 |
hematopoietic stem cell | 1.73e-09 | 168 |
hematopoietic cell | 1.05e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.35e-31 | 76 |
bone element | 2.21e-30 | 82 |
skeletal element | 4.35e-27 | 90 |
immune system | 5.40e-24 | 93 |
skeletal system | 1.04e-23 | 100 |
hematopoietic system | 1.94e-22 | 98 |
blood island | 1.94e-22 | 98 |
hemolymphoid system | 9.27e-20 | 108 |
musculoskeletal system | 1.50e-12 | 167 |
lateral plate mesoderm | 3.57e-09 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.