FFCP PHASE1:Hg19::chr8:134501937..134501977,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6482|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10862|TSSclassifier=S|UniProt=E5RGI3|association_with_transcript=0bp_to_ENST00000519924_5end|coexpression_cluster_id=C5|description=CAGE_peak_9_at_ST3GAL1_5end|id=chr8:134501937..134501977,-|ontology_enrichment_celltype=CL:0000181!5.64e-26!12;CL:0000417!5.64e-26!12;CL:0000668!5.64e-26!12;CL:0000414!5.64e-26!12;CL:0000412!5.64e-26!12;CL:0000182!5.64e-26!12;CL:0000223!3.40e-09!59;CL:0002563!2.89e-07!4|ontology_enrichment_celltype_v019=CL:0000182;1.77e-47;12!CL:0002563;2.03e-12;4!CL:0002253;4.42e-07;2|ontology_enrichment_celltype_v019_2=CL:0000182,1.71e-47,12;CL:0000223,2.57e-15,58;CL:0002563,2.21e-12,4;CL:0002253,4.69e-07,2|ontology_enrichment_development_v019=UBERON:0004161;3.32e-38;11!UBERON:0009497;2.65e-32;13!UBERON:0003104;7.58e-30;31!UBERON:0001041;7.54e-14;30!CL:0000223;1.45e-09;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.59e-26!19;UBERON:0006925!1.59e-26!19;UBERON:0008836!1.59e-26!19;UBERON:0005057!2.77e-23!26;UBERON:0008835!1.05e-22!22;UBERON:0003894!1.05e-22!22;UBERON:0009854!1.18e-21!23;UBERON:0007499!8.38e-20!25;UBERON:0009497!8.38e-20!25;UBERON:0000015!8.38e-20!25;UBERON:0002423!8.38e-20!25;UBERON:0006235!8.38e-20!25;UBERON:0004161!8.38e-20!25;UBERON:0002365!2.71e-19!31;UBERON:0002330!2.71e-19!31;UBERON:0009856!5.53e-19!26;UBERON:0005172!3.17e-17!55;UBERON:0005173!3.17e-17!55;UBERON:0002417!2.81e-15!61;UBERON:0000916!2.81e-15!61;UBERON:0003929!5.86e-15!54;UBERON:0002368!1.02e-13!35;UBERON:0002530!2.94e-11!59;UBERON:0000949!2.47e-10!45;UBERON:0005911!4.59e-09!82;UBERON:0000466!2.76e-08!126;UBERON:0005177!1.27e-07!107;UBERON:0001831!1.39e-07!1;UBERON:0001567!1.39e-07!1;UBERON:0008801!1.39e-07!1;UBERON:0001242!2.89e-07!4;UBERON:0001262!2.89e-07!4;UBERON:0004786!2.89e-07!4;UBERON:0004808!2.89e-07!4;UBERON:0001277!2.89e-07!4;UBERON:0009569!4.37e-07!113;UBERON:0004921!6.79e-07!129;UBERON:0004185!6.79e-07!129|ontology_enrichment_uberon_v019=UBERON:0002107;3.36e-49;19!UBERON:0006925;3.36e-49;19!UBERON:0002423;3.48e-37;25!UBERON:0002365;6.53e-29;31!UBERON:0002330;6.53e-29;31!UBERON:0002368;2.44e-25;33!UBERON:0000949;3.76e-18;43!UBERON:0005172;8.73e-17;52!UBERON:0005173;8.73e-17;52!UBERON:0002417;7.09e-14;58!UBERON:0000916;7.09e-14;58!UBERON:0001242;2.03e-12;4!UBERON:0001262;2.03e-12;4!UBERON:0004786;2.03e-12;4!UBERON:0004808;2.03e-12;4!UBERON:0001277;2.03e-12;4!UBERON:0001007;8.97e-10;81!UBERON:0002530;4.43e-09;57!UBERON:0000485;1.77e-07;7!UBERON:0003929;1.77e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.36e-49,19;UBERON:0006925,3.36e-49,19;UBERON:0008836,3.36e-49,19;UBERON:0008835,2.25e-42,22;UBERON:0003894,2.25e-42,22;UBERON:0009854,1.70e-40,23;UBERON:0007499,3.48e-37,25;UBERON:0009497,3.48e-37,25;UBERON:0000015,3.48e-37,25;UBERON:0002423,3.48e-37,25;UBERON:0006235,3.48e-37,25;UBERON:0004161,3.48e-37,25;UBERON:0009856,1.01e-35,26;UBERON:0002365,8.22e-30,31;UBERON:0002330,8.22e-30,31;UBERON:0002368,2.69e-26,35;UBERON:0005172,6.02e-25,54;UBERON:0005173,6.02e-25,54;UBERON:0003929,7.11e-25,54;UBERON:0002417,2.56e-22,60;UBERON:0000916,2.56e-22,60;UBERON:0000949,3.10e-20,45;UBERON:0005911,6.56e-16,82;UBERON:0002530,3.43e-15,59;UBERON:0005177,1.10e-12,101;UBERON:0001242,2.21e-12,4;UBERON:0001262,2.21e-12,4;UBERON:0004786,2.21e-12,4;UBERON:0004808,2.21e-12,4;UBERON:0001277,2.21e-12,4;UBERON:0009569,2.71e-11,112;UBERON:0004921,1.65e-10,118;UBERON:0001041,5.91e-10,87;UBERON:0003104,5.63e-09,160;UBERON:0009142,5.63e-09,160;UBERON:0001007,2.74e-08,145;UBERON:0001555,2.74e-08,145;UBERON:0007026,2.74e-08,145;UBERON:0000490,3.72e-08,148;UBERON:0004119,2.25e-07,160;UBERON:0000925,2.25e-07,160;UBERON:0006595,2.25e-07,160;UBERON:0003914,4.10e-07,117;UBERON:0005256,8.93e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,60.8424167144788,3.9313088667105,33.67502468084,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.6454012380668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10862 | |||
|TSSclassifier=S | |||
|UniProt=E5RGI3 | |||
|association_with_transcript=0bp_to_ENST00000519924_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_ST3GAL1_5end | |||
|id=chr8:134501937..134501977,- | |||
|ontology_enrichment_celltype=CL:0000181!5.64e-26!12;CL:0000417!5.64e-26!12;CL:0000668!5.64e-26!12;CL:0000414!5.64e-26!12;CL:0000412!5.64e-26!12;CL:0000182!5.64e-26!12;CL:0000223!3.40e-09!59;CL:0002563!2.89e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.77e-47;12!CL:0002563;2.03e-12;4!CL:0002253;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.71e-47,12;CL:0000223,2.57e-15,58;CL:0002563,2.21e-12,4;CL:0002253,4.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.32e-38;11!UBERON:0009497;2.65e-32;13!UBERON:0003104;7.58e-30;31!UBERON:0001041;7.54e-14;30!CL:0000223;1.45e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.59e-26!19;UBERON:0006925!1.59e-26!19;UBERON:0008836!1.59e-26!19;UBERON:0005057!2.77e-23!26;UBERON:0008835!1.05e-22!22;UBERON:0003894!1.05e-22!22;UBERON:0009854!1.18e-21!23;UBERON:0007499!8.38e-20!25;UBERON:0009497!8.38e-20!25;UBERON:0000015!8.38e-20!25;UBERON:0002423!8.38e-20!25;UBERON:0006235!8.38e-20!25;UBERON:0004161!8.38e-20!25;UBERON:0002365!2.71e-19!31;UBERON:0002330!2.71e-19!31;UBERON:0009856!5.53e-19!26;UBERON:0005172!3.17e-17!55;UBERON:0005173!3.17e-17!55;UBERON:0002417!2.81e-15!61;UBERON:0000916!2.81e-15!61;UBERON:0003929!5.86e-15!54;UBERON:0002368!1.02e-13!35;UBERON:0002530!2.94e-11!59;UBERON:0000949!2.47e-10!45;UBERON:0005911!4.59e-09!82;UBERON:0000466!2.76e-08!126;UBERON:0005177!1.27e-07!107;UBERON:0001831!1.39e-07!1;UBERON:0001567!1.39e-07!1;UBERON:0008801!1.39e-07!1;UBERON:0001242!2.89e-07!4;UBERON:0001262!2.89e-07!4;UBERON:0004786!2.89e-07!4;UBERON:0004808!2.89e-07!4;UBERON:0001277!2.89e-07!4;UBERON:0009569!4.37e-07!113;UBERON:0004921!6.79e-07!129;UBERON:0004185!6.79e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.36e-49;19!UBERON:0006925;3.36e-49;19!UBERON:0002423;3.48e-37;25!UBERON:0002365;6.53e-29;31!UBERON:0002330;6.53e-29;31!UBERON:0002368;2.44e-25;33!UBERON:0000949;3.76e-18;43!UBERON:0005172;8.73e-17;52!UBERON:0005173;8.73e-17;52!UBERON:0002417;7.09e-14;58!UBERON:0000916;7.09e-14;58!UBERON:0001242;2.03e-12;4!UBERON:0001262;2.03e-12;4!UBERON:0004786;2.03e-12;4!UBERON:0004808;2.03e-12;4!UBERON:0001277;2.03e-12;4!UBERON:0001007;8.97e-10;81!UBERON:0002530;4.43e-09;57!UBERON:0000485;1.77e-07;7!UBERON:0003929;1.77e-07;7 | |||
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|short_description=p9@ST3GAL1 | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p9@ST3GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ST3GAL1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000519924_5end |
EntrezGene: | ST3GAL1 |
HGNC: | 10862 |
UniProt: | E5RGI3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.71e-47 | 12 |
endodermal cell | 2.57e-15 | 58 |
intestinal epithelial cell | 2.21e-12 | 4 |
epithelial cell of large intestine | 4.69e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.