FFCP PHASE1:Hg19::chr8:23386305..23386312,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51312|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29786|TSSclassifier=S|UniProt=|association_with_transcript=-5bp_to_ENST00000519973_5end|coexpression_cluster_id=C1|description=CAGE_peak_17_at_SLC25A37_5end|id=chr8:23386305..23386312,+|ontology_enrichment_celltype=CL:0002057!8.77e-13!42;CL:0000860!9.62e-13!45;CL:0000839!1.51e-10!70;CL:0000763!6.15e-10!112;CL:0000049!6.15e-10!112;CL:0000557!2.49e-09!71;CL:0002032!3.51e-08!165;CL:0000837!3.51e-08!165;CL:0002009!3.83e-08!65;CL:0002031!4.87e-08!124;CL:0000766!5.56e-08!76;CL:0002194!7.09e-08!63;CL:0000576!7.09e-08!63;CL:0000040!7.09e-08!63;CL:0000559!7.09e-08!63;CL:0000037!3.88e-07!172;CL:0000566!3.88e-07!172;CL:0000988!5.45e-07!182|ontology_enrichment_celltype_v019=CL:0000860;3.82e-17;33!CL:0002057;3.82e-17;33!CL:0000473;3.17e-15;39!CL:0000234;3.17e-15;39!CL:0000576;1.12e-12;48|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-22,42;CL:0002057,1.62e-22,42;CL:0000473,1.23e-19,48;CL:0000234,1.23e-19,48;CL:0002194,1.35e-15,59;CL:0000576,1.35e-15,59;CL:0000040,1.35e-15,59;CL:0000559,1.35e-15,59;CL:0002009,4.49e-15,61;CL:0000839,6.64e-14,66;CL:0000557,1.09e-13,67;CL:0000766,1.04e-12,72;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108;CL:0002087,9.54e-08,115;CL:0002031,2.14e-07,120|ontology_enrichment_development_v019=CL:0002057;3.48e-16;42!UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.71e-09!102;UBERON:0003061!8.71e-09!102;UBERON:0001474!1.85e-08!86;UBERON:0002193!2.05e-08!112;UBERON:0002371!1.07e-07!80;UBERON:0004765!3.19e-07!101;UBERON:0001434!3.19e-07!101|ontology_enrichment_uberon_v019=UBERON:0000473;8.61e-09;8|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-12,76;UBERON:0001474,4.22e-11,82;UBERON:0004765,4.56e-10,90;UBERON:0002405,1.01e-09,93;UBERON:0002390,3.37e-09,98;UBERON:0003061,3.37e-09,98;UBERON:0001434,5.30e-09,100;UBERON:0000473,8.62e-09,8;UBERON:0002193,2.73e-08,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0,0,0,0.553995408531877,1.00272223735071,0,0,0,0,0,0,0.485168122375632,0,0,0.619412741790207,1.1507695692886,0,0,0.344745680736619,0.645484683583826,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0.962787081228281,1.27867425159808,1.31940520074686,0.797854630486527,0.426224750532694,1.16083695451434,1.13477044938228,0.622822248995575,1.25624332628372,1.0429658368404,0.65156653411535,0.605399502633369,0,0,0,0,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0.288239906833923,0.50496973370552,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.877039506583738,0.784306353074702,0,0,0,0,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0.178064071293475,0,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,0.34350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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51312 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29786 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_ENST00000519973_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_17_at_SLC25A37_5end | |||
|id=chr8:23386305..23386312,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.77e-13!42;CL:0000860!9.62e-13!45;CL:0000839!1.51e-10!70;CL:0000763!6.15e-10!112;CL:0000049!6.15e-10!112;CL:0000557!2.49e-09!71;CL:0002032!3.51e-08!165;CL:0000837!3.51e-08!165;CL:0002009!3.83e-08!65;CL:0002031!4.87e-08!124;CL:0000766!5.56e-08!76;CL:0002194!7.09e-08!63;CL:0000576!7.09e-08!63;CL:0000040!7.09e-08!63;CL:0000559!7.09e-08!63;CL:0000037!3.88e-07!172;CL:0000566!3.88e-07!172;CL:0000988!5.45e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.82e-17;33!CL:0002057;3.82e-17;33!CL:0000473;3.17e-15;39!CL:0000234;3.17e-15;39!CL:0000576;1.12e-12;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.62e-22,42;CL:0002057,1.62e-22,42;CL:0000473,1.23e-19,48;CL:0000234,1.23e-19,48;CL:0002194,1.35e-15,59;CL:0000576,1.35e-15,59;CL:0000040,1.35e-15,59;CL:0000559,1.35e-15,59;CL:0002009,4.49e-15,61;CL:0000839,6.64e-14,66;CL:0000557,1.09e-13,67;CL:0000766,1.04e-12,72;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108;CL:0002087,9.54e-08,115;CL:0002031,2.14e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.48e-16;42!UBERON:0009117;3.33e-07;10!UBERON:0005564;3.33e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.71e-09!102;UBERON:0003061!8.71e-09!102;UBERON:0001474!1.85e-08!86;UBERON:0002193!2.05e-08!112;UBERON:0002371!1.07e-07!80;UBERON:0004765!3.19e-07!101;UBERON:0001434!3.19e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.61e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.12e-12,76;UBERON:0001474,4.22e-11,82;UBERON:0004765,4.56e-10,90;UBERON:0002405,1.01e-09,93;UBERON:0002390,3.37e-09,98;UBERON:0003061,3.37e-09,98;UBERON:0001434,5.30e-09,100;UBERON:0000473,8.62e-09,8;UBERON:0002193,2.73e-08,108 | |||
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| |||
|short_description=p17@SLC25A37 | |||
}} |
Revision as of 04:42, 14 September 2013
Short description: | p17@SLC25A37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_SLC25A37_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -5bp_to_ENST00000519973_5end |
EntrezGene: | SLC25A37 |
HGNC: | 29786 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.62e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-22 | 42 |
defensive cell | 1.23e-19 | 48 |
phagocyte | 1.23e-19 | 48 |
monopoietic cell | 1.35e-15 | 59 |
monocyte | 1.35e-15 | 59 |
monoblast | 1.35e-15 | 59 |
promonocyte | 1.35e-15 | 59 |
macrophage dendritic cell progenitor | 4.49e-15 | 61 |
myeloid lineage restricted progenitor cell | 6.64e-14 | 66 |
granulocyte monocyte progenitor cell | 1.09e-13 | 67 |
myeloid leukocyte | 1.04e-12 | 72 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
nongranular leukocyte | 9.54e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 2.14e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.12e-12 | 76 |
bone element | 4.22e-11 | 82 |
skeletal element | 4.56e-10 | 90 |
immune system | 1.01e-09 | 93 |
hematopoietic system | 3.37e-09 | 98 |
blood island | 3.37e-09 | 98 |
skeletal system | 5.30e-09 | 100 |
testis | 8.62e-09 | 8 |
hemolymphoid system | 2.73e-08 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.