FFCP PHASE1:Hg19::chr8:95653373..95653415,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54845|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25966|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000358397_5end|coexpression_cluster_id=C2933|description=CAGE_peak_1_at_ESRP1_5end|id=chr8:95653373..95653415,+|ontology_enrichment_celltype=CL:0000066!7.17e-30!254;CL:0002076!3.41e-21!43;CL:0000223!1.72e-15!59;CL:0002251!1.13e-10!21;CL:0002368!2.74e-10!13;CL:0002159!1.86e-09!13;CL:0000039!5.32e-08!7;CL:0000586!5.32e-08!7;CL:0000082!8.06e-07!19|ontology_enrichment_celltype_v019=CL:0002076;2.08e-19;42!CL:0002251;7.12e-13;20!CL:0002368;2.08e-11;13!CL:0002159;1.86e-09;14!CL:0000039;9.22e-09;7!CL:0000586;9.22e-09;7!CL:0002202;2.84e-07;9!CL:0002632;2.84e-07;9!CL:0000240;6.91e-07;6!CL:0000311;6.91e-07;6!CL:0000079;6.91e-07;6!CL:0000237;6.91e-07;6!CL:0000082;7.97e-07;19|ontology_enrichment_celltype_v019_2=CL:0000066,3.31e-31,253;CL:0002076,6.44e-25,42;CL:0000223,1.20e-18,58;CL:0002251,7.06e-13,20;CL:0002368,2.09e-11,13;CL:0002159,1.80e-09,14;CL:0000039,9.01e-09,7;CL:0000586,9.01e-09,7;CL:0002202,2.86e-07,9;CL:0002632,2.86e-07,9;CL:0000240,6.91e-07,6;CL:0000311,6.91e-07,6;CL:0000079,6.91e-07,6;CL:0000237,6.91e-07,6;CL:0000036,6.91e-07,6;CL:0000357,6.91e-07,6;CL:0000114,6.91e-07,6;CL:0000082,7.78e-07,19|ontology_enrichment_development_v019=CL:0000223;1.13e-09;58!CL:0000357;6.91e-07;6!CL:0000114;6.91e-07;6|ontology_enrichment_disease=DOID:305!2.79e-23!106;DOID:0050687!2.61e-15!143;DOID:1749!1.99e-14!14;DOID:299!2.01e-07!25|ontology_enrichment_disease_v019=DOID:1749;5.95e-16;14!DOID:299;1.55e-08;25!DOID:305;2.50e-08;106|ontology_enrichment_disease_v019_2=DOID:305,4.75e-22,106;DOID:1749,5.78e-16,14;DOID:0050687,3.66e-15,143;DOID:299,1.58e-08,25|ontology_enrichment_uberon=UBERON:0004119!1.11e-23!169;UBERON:0000925!1.11e-23!169;UBERON:0006595!1.11e-23!169;UBERON:0001007!1.64e-17!155;UBERON:0001555!1.64e-17!155;UBERON:0007026!1.64e-17!155;UBERON:0004921!2.02e-15!129;UBERON:0004185!2.02e-15!129;UBERON:0001004!3.77e-15!72;UBERON:0000077!2.88e-14!130;UBERON:0000464!7.58e-14!104;UBERON:0005153!2.00e-12!37;UBERON:0000466!8.56e-12!126;UBERON:0000161!2.32e-11!35;UBERON:0005911!2.74e-11!82;UBERON:0000065!2.64e-10!53;UBERON:0005178!8.85e-10!34;UBERON:0002224!8.85e-10!34;UBERON:0005157!1.50e-09!51;UBERON:0005181!2.72e-09!35;UBERON:0005156!3.89e-09!59;UBERON:0000990!3.89e-09!59;UBERON:0001041!9.12e-09!98;UBERON:0000166!1.99e-08!21;UBERON:0002048!2.65e-08!22;UBERON:0000117!2.65e-08!22;UBERON:0000171!2.65e-08!22;UBERON:0000170!2.65e-08!22;UBERON:0005597!2.65e-08!22;UBERON:0000118!2.65e-08!22;UBERON:0005631!6.15e-08!14;UBERON:0000158!6.15e-08!14;UBERON:0000344!6.85e-08!12;UBERON:0000915!1.46e-07!52;UBERON:0003133!1.79e-07!48;UBERON:0004807!2.39e-07!28;UBERON:0003101!5.26e-07!22;UBERON:0000079!5.26e-07!22;UBERON:0008947!7.47e-07!38;UBERON:0003258!7.47e-07!38;UBERON:0004802!8.06e-07!19;UBERON:0000115!8.06e-07!19|ontology_enrichment_uberon_v019=UBERON:0004921;1.84e-11;33!UBERON:0005178;3.36e-09;34!UBERON:0002224;3.36e-09;34!UBERON:0004807;6.08e-09;22!UBERON:0005181;1.39e-08;35!UBERON:0005911;1.43e-08;36!UBERON:0002048;1.86e-08;22!UBERON:0000117;1.86e-08;22!UBERON:0000171;1.86e-08;22!UBERON:0000170;1.86e-08;22!UBERON:0001555;2.94e-08;54!UBERON:0000161;3.03e-08;19!UBERON:0000166;3.03e-08;19!UBERON:0001041;1.72e-07;14!UBERON:0000344;2.04e-07;20!UBERON:0005409;2.32e-07;22!UBERON:0000165;3.68e-07;28!UBERON:0003101;4.34e-07;22!UBERON:0000079;4.34e-07;22!UBERON:0001004;6.47e-07;65!UBERON:0004802;7.97e-07;19!UBERON:0000115;7.97e-07;19!UBERON:0000974;8.41e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.14e-24,160;UBERON:0000925,1.14e-24,160;UBERON:0006595,1.14e-24,160;UBERON:0001007,9.46e-19,145;UBERON:0001555,9.46e-19,145;UBERON:0007026,9.46e-19,145;UBERON:0004921,2.47e-16,118;UBERON:0001004,9.66e-15,74;UBERON:0005153,2.18e-12,37;UBERON:0000161,1.58e-11,36;UBERON:0005911,1.38e-10,82;UBERON:0005178,2.13e-10,34;UBERON:0002224,2.13e-10,34;UBERON:0005157,5.74e-10,47;UBERON:0005181,6.57e-10,35;UBERON:0000065,1.21e-09,54;UBERON:0005156,1.31e-09,59;UBERON:0000990,1.31e-09,59;UBERON:0001041,3.80e-09,87;UBERON:0000166,7.19e-09,22;UBERON:0002048,1.84e-08,22;UBERON:0000117,1.84e-08,22;UBERON:0000171,1.84e-08,22;UBERON:0000170,1.84e-08,22;UBERON:0005597,1.84e-08,22;UBERON:0000118,1.84e-08,22;UBERON:0000915,1.96e-08,52;UBERON:0003133,3.14e-08,48;UBERON:0001008,3.65e-08,48;UBERON:0006554,8.92e-08,47;UBERON:0005631,1.27e-07,14;UBERON:0000158,1.27e-07,14;UBERON:0000344,1.99e-07,20;UBERON:0004175,3.46e-07,25;UBERON:0003101,4.26e-07,22;UBERON:0000079,4.26e-07,22;UBERON:0005177,4.52e-07,101;UBERON:0004807,7.01e-07,28;UBERON:0004802,7.78e-07,19;UBERON:0000115,7.78e-07,19;UBERON:0000165,9.08e-07,29;UBERON:0000930,9.08e-07,29;UBERON:0008947,9.80e-07,38;UBERON:0003258,9.80e-07,38|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,17.6928434281086,30.0054502228144,32.984647191656,18.1999214977633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08371286321253,48.7293248973831,29.5181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5829,66.0180508435003,0.533636729388577,0,0,23.4640942403454,4.64517487894893,22.7861859856814,7.32332451604064,0.201273793591026,0|short_description=p1@ESRP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=54845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25966 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000358397_5end | |||
|coexpression_cluster_id=C2933 | |||
|description=CAGE_peak_1_at_ESRP1_5end | |||
|id=chr8:95653373..95653415,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.17e-30!254;CL:0002076!3.41e-21!43;CL:0000223!1.72e-15!59;CL:0002251!1.13e-10!21;CL:0002368!2.74e-10!13;CL:0002159!1.86e-09!13;CL:0000039!5.32e-08!7;CL:0000586!5.32e-08!7;CL:0000082!8.06e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.08e-19;42!CL:0002251;7.12e-13;20!CL:0002368;2.08e-11;13!CL:0002159;1.86e-09;14!CL:0000039;9.22e-09;7!CL:0000586;9.22e-09;7!CL:0002202;2.84e-07;9!CL:0002632;2.84e-07;9!CL:0000240;6.91e-07;6!CL:0000311;6.91e-07;6!CL:0000079;6.91e-07;6!CL:0000237;6.91e-07;6!CL:0000082;7.97e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.31e-31,253;CL:0002076,6.44e-25,42;CL:0000223,1.20e-18,58;CL:0002251,7.06e-13,20;CL:0002368,2.09e-11,13;CL:0002159,1.80e-09,14;CL:0000039,9.01e-09,7;CL:0000586,9.01e-09,7;CL:0002202,2.86e-07,9;CL:0002632,2.86e-07,9;CL:0000240,6.91e-07,6;CL:0000311,6.91e-07,6;CL:0000079,6.91e-07,6;CL:0000237,6.91e-07,6;CL:0000036,6.91e-07,6;CL:0000357,6.91e-07,6;CL:0000114,6.91e-07,6;CL:0000082,7.78e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;1.13e-09;58!CL:0000357;6.91e-07;6!CL:0000114;6.91e-07;6 | |||
|ontology_enrichment_disease=DOID:305!2.79e-23!106;DOID:0050687!2.61e-15!143;DOID:1749!1.99e-14!14;DOID:299!2.01e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.95e-16;14!DOID:299;1.55e-08;25!DOID:305;2.50e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.75e-22,106;DOID:1749,5.78e-16,14;DOID:0050687,3.66e-15,143;DOID:299,1.58e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.11e-23!169;UBERON:0000925!1.11e-23!169;UBERON:0006595!1.11e-23!169;UBERON:0001007!1.64e-17!155;UBERON:0001555!1.64e-17!155;UBERON:0007026!1.64e-17!155;UBERON:0004921!2.02e-15!129;UBERON:0004185!2.02e-15!129;UBERON:0001004!3.77e-15!72;UBERON:0000077!2.88e-14!130;UBERON:0000464!7.58e-14!104;UBERON:0005153!2.00e-12!37;UBERON:0000466!8.56e-12!126;UBERON:0000161!2.32e-11!35;UBERON:0005911!2.74e-11!82;UBERON:0000065!2.64e-10!53;UBERON:0005178!8.85e-10!34;UBERON:0002224!8.85e-10!34;UBERON:0005157!1.50e-09!51;UBERON:0005181!2.72e-09!35;UBERON:0005156!3.89e-09!59;UBERON:0000990!3.89e-09!59;UBERON:0001041!9.12e-09!98;UBERON:0000166!1.99e-08!21;UBERON:0002048!2.65e-08!22;UBERON:0000117!2.65e-08!22;UBERON:0000171!2.65e-08!22;UBERON:0000170!2.65e-08!22;UBERON:0005597!2.65e-08!22;UBERON:0000118!2.65e-08!22;UBERON:0005631!6.15e-08!14;UBERON:0000158!6.15e-08!14;UBERON:0000344!6.85e-08!12;UBERON:0000915!1.46e-07!52;UBERON:0003133!1.79e-07!48;UBERON:0004807!2.39e-07!28;UBERON:0003101!5.26e-07!22;UBERON:0000079!5.26e-07!22;UBERON:0008947!7.47e-07!38;UBERON:0003258!7.47e-07!38;UBERON:0004802!8.06e-07!19;UBERON:0000115!8.06e-07!19 | |||
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| |||
|short_description=p1@ESRP1 | |||
}} |
Revision as of 06:25, 14 September 2013
Short description: | p1@ESRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ESRP1_5end |
Coexpression cluster: | C2933_testicular_rectal_squamous_malignant_nasal_small_large |
Association with transcript: | 0bp_to_ENST00000358397_5end |
EntrezGene: | ESRP1 |
HGNC: | 25966 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.31e-31 | 253 |
endo-epithelial cell | 6.44e-25 | 42 |
endodermal cell | 1.20e-18 | 58 |
epithelial cell of alimentary canal | 7.06e-13 | 20 |
respiratory epithelial cell | 2.09e-11 | 13 |
general ecto-epithelial cell | 1.80e-09 | 14 |
germ line cell | 9.01e-09 | 7 |
germ cell | 9.01e-09 | 7 |
epithelial cell of tracheobronchial tree | 2.86e-07 | 9 |
epithelial cell of lower respiratory tract | 2.86e-07 | 9 |
stratified squamous epithelial cell | 6.91e-07 | 6 |
keratin accumulating cell | 6.91e-07 | 6 |
stratified epithelial cell | 6.91e-07 | 6 |
keratinizing barrier epithelial cell | 6.91e-07 | 6 |
epithelial fate stem cell | 6.91e-07 | 6 |
stratified epithelial stem cell | 6.91e-07 | 6 |
surface ectodermal cell | 6.91e-07 | 6 |
epithelial cell of lung | 7.78e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.75e-22 | 106 |
squamous cell carcinoma | 5.78e-16 | 14 |
cell type cancer | 3.66e-15 | 143 |
adenocarcinoma | 1.58e-08 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.