FFCP PHASE1:Hg19::chr9:128394685..128394703,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2741|description=CAGE_peak_at_chr9:128394685..128394703,-|id=chr9:128394685..128394703,-|ontology_enrichment_celltype=CL:0002057!1.94e-50!42;CL:0000860!9.25e-47!45;CL:0002009!6.78e-37!65;CL:0002087!1.44e-35!119;CL:0002194!1.18e-34!63;CL:0000576!1.18e-34!63;CL:0000040!1.18e-34!63;CL:0000559!1.18e-34!63;CL:0000557!2.17e-33!71;CL:0002031!1.14e-31!124;CL:0000738!1.32e-31!140;CL:0000839!9.53e-31!70;CL:0000766!5.78e-28!76;CL:0000037!1.52e-24!172;CL:0000566!1.52e-24!172;CL:0002032!4.77e-24!165;CL:0000837!4.77e-24!165;CL:0000988!7.63e-23!182;CL:0000763!2.10e-19!112;CL:0000049!2.10e-19!112;CL:0000134!2.18e-08!358;CL:0002320!4.23e-08!365;CL:0000945!1.58e-07!24;CL:0000826!1.58e-07!24;CL:0000219!4.36e-07!390|ontology_enrichment_celltype_v019=CL:0000860;6.39e-16;33!CL:0002057;6.39e-16;33!CL:0001014;3.06e-12;2!CL:0001016;3.06e-12;2!CL:0000473;6.45e-12;39!CL:0000234;6.45e-12;39!CL:0000945;5.07e-09;24!CL:0002087;1.67e-07;104!CL:0000576;6.62e-07;48|ontology_enrichment_celltype_v019_2=CL:0002031,1.59e-14,120;CL:0000860,2.92e-13,42;CL:0002057,2.92e-13,42;CL:0000738,8.37e-13,136;CL:0002009,9.80e-13,61;CL:0001014,3.62e-12,2;CL:0001016,3.62e-12,2;CL:0002087,5.49e-12,115;CL:0000473,1.25e-11,48;CL:0000234,1.25e-11,48;CL:0000557,1.30e-11,67;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002194,2.47e-09,59;CL:0000576,2.47e-09,59;CL:0000040,2.47e-09,59;CL:0000559,2.47e-09,59;CL:0000945,5.00e-09,24;CL:0000826,5.00e-09,24;CL:0000839,2.26e-08,66;CL:0000766,1.08e-07,72;CL:0000763,3.19e-07,108;CL:0000049,3.19e-07,108|ontology_enrichment_development_v019=CL:0002057;7.41e-08;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!4.17e-29!80;UBERON:0001474!9.63e-27!86;UBERON:0002390!3.13e-26!102;UBERON:0003061!3.13e-26!102;UBERON:0002193!2.02e-23!112;UBERON:0004765!4.73e-22!101;UBERON:0001434!4.73e-22!101;UBERON:0002405!9.95e-21!115;UBERON:0002204!2.19e-11!167;UBERON:0003081!1.38e-10!216;UBERON:0002384!1.04e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.97e-10,76;UBERON:0001474,1.65e-09,82;UBERON:0004765,1.14e-08,90;UBERON:0002405,2.17e-08,93;UBERON:0002390,5.81e-08,98;UBERON:0003061,5.81e-08,98;UBERON:0001434,8.39e-08,100;UBERON:0002193,3.19e-07,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.03772180964799,3.7781175030566,0,0,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.256160706529101,0.47296445977717,2.06847408441971,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,3.06083892370903,1.92557416245656,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233|short_description=p@chr9:128394685..128394703,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2741 | |||
|description=CAGE_peak_at_chr9:128394685..128394703,- | |||
|id=chr9:128394685..128394703,- | |||
|ontology_enrichment_celltype=CL:0002057!1.94e-50!42;CL:0000860!9.25e-47!45;CL:0002009!6.78e-37!65;CL:0002087!1.44e-35!119;CL:0002194!1.18e-34!63;CL:0000576!1.18e-34!63;CL:0000040!1.18e-34!63;CL:0000559!1.18e-34!63;CL:0000557!2.17e-33!71;CL:0002031!1.14e-31!124;CL:0000738!1.32e-31!140;CL:0000839!9.53e-31!70;CL:0000766!5.78e-28!76;CL:0000037!1.52e-24!172;CL:0000566!1.52e-24!172;CL:0002032!4.77e-24!165;CL:0000837!4.77e-24!165;CL:0000988!7.63e-23!182;CL:0000763!2.10e-19!112;CL:0000049!2.10e-19!112;CL:0000134!2.18e-08!358;CL:0002320!4.23e-08!365;CL:0000945!1.58e-07!24;CL:0000826!1.58e-07!24;CL:0000219!4.36e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.39e-16;33!CL:0002057;6.39e-16;33!CL:0001014;3.06e-12;2!CL:0001016;3.06e-12;2!CL:0000473;6.45e-12;39!CL:0000234;6.45e-12;39!CL:0000945;5.07e-09;24!CL:0002087;1.67e-07;104!CL:0000576;6.62e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.59e-14,120;CL:0000860,2.92e-13,42;CL:0002057,2.92e-13,42;CL:0000738,8.37e-13,136;CL:0002009,9.80e-13,61;CL:0001014,3.62e-12,2;CL:0001016,3.62e-12,2;CL:0002087,5.49e-12,115;CL:0000473,1.25e-11,48;CL:0000234,1.25e-11,48;CL:0000557,1.30e-11,67;CL:0002032,8.68e-11,161;CL:0000837,8.68e-11,161;CL:0000037,2.50e-10,168;CL:0000988,8.62e-10,177;CL:0002194,2.47e-09,59;CL:0000576,2.47e-09,59;CL:0000040,2.47e-09,59;CL:0000559,2.47e-09,59;CL:0000945,5.00e-09,24;CL:0000826,5.00e-09,24;CL:0000839,2.26e-08,66;CL:0000766,1.08e-07,72;CL:0000763,3.19e-07,108;CL:0000049,3.19e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.41e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.17e-29!80;UBERON:0001474!9.63e-27!86;UBERON:0002390!3.13e-26!102;UBERON:0003061!3.13e-26!102;UBERON:0002193!2.02e-23!112;UBERON:0004765!4.73e-22!101;UBERON:0001434!4.73e-22!101;UBERON:0002405!9.95e-21!115;UBERON:0002204!2.19e-11!167;UBERON:0003081!1.38e-10!216;UBERON:0002384!1.04e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.97e-10,76;UBERON:0001474,1.65e-09,82;UBERON:0004765,1.14e-08,90;UBERON:0002405,2.17e-08,93;UBERON:0002390,5.81e-08,98;UBERON:0003061,5.81e-08,98;UBERON:0001434,8.39e-08,100;UBERON:0002193,3.19e-07,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.03772180964799,3.7781175030566,0,0,0,0,0,0,0,0,0,0,0.802177789880567,0.217010870715852,0,0,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.863077176966451,0.256160706529101,0.47296445977717,2.06847408441971,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.674170453335254,3.06083892370903,1.92557416245656,1.27867425159808,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0.736555271975129,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr9:128394685..128394703,- | |||
}} |
Revision as of 07:26, 14 September 2013
Short description: | p@chr9:128394685..128394703, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:128394685..128394703, - |
Coexpression cluster: | C2741_B_CD14_splenic_immature_b_Mast_xeroderma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.59e-14 | 120 |
classical monocyte | 2.92e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.92e-13 | 42 |
leukocyte | 8.37e-13 | 136 |
macrophage dendritic cell progenitor | 9.80e-13 | 61 |
CD1a-positive Langerhans cell | 3.62e-12 | 2 |
immature CD1a-positive Langerhans cell | 3.62e-12 | 2 |
nongranular leukocyte | 5.49e-12 | 115 |
defensive cell | 1.25e-11 | 48 |
phagocyte | 1.25e-11 | 48 |
granulocyte monocyte progenitor cell | 1.30e-11 | 67 |
hematopoietic oligopotent progenitor cell | 8.68e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.68e-11 | 161 |
hematopoietic stem cell | 2.50e-10 | 168 |
hematopoietic cell | 8.62e-10 | 177 |
monopoietic cell | 2.47e-09 | 59 |
monocyte | 2.47e-09 | 59 |
monoblast | 2.47e-09 | 59 |
promonocyte | 2.47e-09 | 59 |
lymphocyte of B lineage | 5.00e-09 | 24 |
pro-B cell | 5.00e-09 | 24 |
myeloid lineage restricted progenitor cell | 2.26e-08 | 66 |
myeloid leukocyte | 1.08e-07 | 72 |
myeloid cell | 3.19e-07 | 108 |
common myeloid progenitor | 3.19e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.97e-10 | 76 |
bone element | 1.65e-09 | 82 |
skeletal element | 1.14e-08 | 90 |
immune system | 2.17e-08 | 93 |
hematopoietic system | 5.81e-08 | 98 |
blood island | 5.81e-08 | 98 |
skeletal system | 8.39e-08 | 100 |
hemolymphoid system | 3.19e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.