FFCP PHASE1:Mm9::chr7:31208431..31208442,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243910|HGNC=|MCL_coexpression_id=7|UniProt=Q2TB02|association_with_transcript=108bp_to_NM_172142,uc009gej.1_5end|description=CAGE_peak_6_at_Nfkbid_5end|id=chr7:31208431..31208442,+|ontology_enrichment_celltype=CL:0000893!1.11e-22!6;CL:0002489!1.11e-22!6;CL:0000898!1.11e-22!6;CL:0000809!1.11e-22!6;CL:0000810!1.11e-22!6;CL:0000895!1.11e-22!6;CL:0000808!1.11e-22!6;CL:0000894!1.11e-22!6;CL:0000806!1.11e-22!6;CL:0000807!1.11e-22!6;CL:0000805!1.11e-22!6;CL:0002425!1.11e-22!6;CL:0002436!1.11e-22!6;CL:0002427!1.11e-22!6;CL:0002428!1.11e-22!6;CL:0002429!1.11e-22!6;CL:0002433!1.11e-22!6;CL:0002431!1.11e-22!6;CL:0002432!1.11e-22!6;CL:0000624!5.32e-17!8;CL:0000791!4.21e-15!9;CL:0000789!4.21e-15!9;CL:0002420!4.21e-15!9;CL:0002419!4.21e-15!9;CL:0000790!4.21e-15!9;CL:0000084!2.45e-12!11;CL:0000827!2.45e-12!11;CL:0000838!2.69e-11!12;CL:0000542!2.04e-10!13;CL:0000051!2.04e-10!13;CL:0002320!3.45e-10!46;CL:0000134!3.45e-10!46;CL:0002031!7.45e-10!25;CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0000219!1.79e-08!54;CL:0000738!6.32e-08!17;CL:0002087!6.32e-08!17|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.18e-12!45;UBERON:0003061!1.18e-12!45;UBERON:0002193!9.10e-12!48;UBERON:0004177!8.95e-11!29;UBERON:0002370!1.07e-10!23;UBERON:0000974!1.07e-10!23;UBERON:0004807!1.07e-10!23;UBERON:0005058!1.07e-10!23;UBERON:0003351!1.07e-10!23;UBERON:0009113!1.07e-10!23;UBERON:0003295!1.07e-10!23;UBERON:0009722!1.07e-10!23;UBERON:0005562!1.07e-10!23;UBERON:0007690!1.07e-10!23;UBERON:0006562!3.20e-10!24;UBERON:0003408!3.20e-10!24;UBERON:0001557!3.20e-10!24;UBERON:0001042!3.20e-10!24;UBERON:0008814!3.20e-10!24;UBERON:0009145!3.20e-10!24;UBERON:0002384!3.45e-10!46;UBERON:0002405!3.85e-09!70;UBERON:0000072!5.23e-09!27;UBERON:0003081!2.99e-08!88;UBERON:0005057!3.04e-07!51;UBERON:0000063!8.74e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55|phase1_expression=0,0,0,0,0,0,0,0,30.9735188733667,50.3238731592286,2.56826952338257,1.19658238493005,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Nfkbid}} | ||
|EntrezGene=243910 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q2TB02 | |||
|association_with_transcript=108bp_to_NM_172142,uc009gej.1_5end | |||
|description=CAGE_peak_6_at_Nfkbid_5end | |||
|id=chr7:31208431..31208442,+ | |||
|ontology_enrichment_celltype=CL:0000893!1.11e-22!6;CL:0002489!1.11e-22!6;CL:0000898!1.11e-22!6;CL:0000809!1.11e-22!6;CL:0000810!1.11e-22!6;CL:0000895!1.11e-22!6;CL:0000808!1.11e-22!6;CL:0000894!1.11e-22!6;CL:0000806!1.11e-22!6;CL:0000807!1.11e-22!6;CL:0000805!1.11e-22!6;CL:0002425!1.11e-22!6;CL:0002436!1.11e-22!6;CL:0002427!1.11e-22!6;CL:0002428!1.11e-22!6;CL:0002429!1.11e-22!6;CL:0002433!1.11e-22!6;CL:0002431!1.11e-22!6;CL:0002432!1.11e-22!6;CL:0000624!5.32e-17!8;CL:0000791!4.21e-15!9;CL:0000789!4.21e-15!9;CL:0002420!4.21e-15!9;CL:0002419!4.21e-15!9;CL:0000790!4.21e-15!9;CL:0000084!2.45e-12!11;CL:0000827!2.45e-12!11;CL:0000838!2.69e-11!12;CL:0000542!2.04e-10!13;CL:0000051!2.04e-10!13;CL:0002320!3.45e-10!46;CL:0000134!3.45e-10!46;CL:0002031!7.45e-10!25;CL:0000988!1.06e-09!32;CL:0002032!1.06e-09!32;CL:0000037!1.06e-09!32;CL:0000566!1.06e-09!32;CL:0000837!1.06e-09!32;CL:0000219!1.79e-08!54;CL:0000738!6.32e-08!17;CL:0002087!6.32e-08!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,3.91e-58,6;CL:0002489,3.91e-58,6;CL:0000898,3.91e-58,6;CL:0000809,3.91e-58,6;CL:0000810,3.91e-58,6;CL:0000895,3.91e-58,6;CL:0000808,3.91e-58,6;CL:0000894,3.91e-58,6;CL:0000806,3.91e-58,6;CL:0000807,3.91e-58,6;CL:0000805,3.91e-58,6;CL:0002425,3.91e-58,6;CL:0002436,3.91e-58,6;CL:0002427,3.91e-58,6;CL:0002428,3.91e-58,6;CL:0002429,3.91e-58,6;CL:0002433,3.91e-58,6;CL:0002431,3.91e-58,6;CL:0002432,3.91e-58,6;CL:0000624,6.68e-44,8;CL:0000791,3.75e-39,9;CL:0000789,3.75e-39,9;CL:0002420,3.75e-39,9;CL:0002419,3.75e-39,9;CL:0000790,3.75e-39,9;CL:0000084,3.07e-32,11;CL:0000827,3.07e-32,11;CL:0000838,1.21e-29,12;CL:0000542,1.91e-27,13;CL:0000051,1.91e-27,13;CL:0000738,3.13e-21,17;CL:0002087,3.13e-21,17;CL:0002031,9.61e-15,25;CL:0000988,1.03e-11,32;CL:0002032,1.03e-11,32;CL:0000037,1.03e-11,32;CL:0000837,1.03e-11,32;CL:0002320,2.15e-08,46;CL:0000134,2.15e-08,46;CL:0000219,2.91e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-12!45;UBERON:0003061!1.18e-12!45;UBERON:0002193!9.10e-12!48;UBERON:0004177!8.95e-11!29;UBERON:0002370!1.07e-10!23;UBERON:0000974!1.07e-10!23;UBERON:0004807!1.07e-10!23;UBERON:0005058!1.07e-10!23;UBERON:0003351!1.07e-10!23;UBERON:0009113!1.07e-10!23;UBERON:0003295!1.07e-10!23;UBERON:0009722!1.07e-10!23;UBERON:0005562!1.07e-10!23;UBERON:0007690!1.07e-10!23;UBERON:0006562!3.20e-10!24;UBERON:0003408!3.20e-10!24;UBERON:0001557!3.20e-10!24;UBERON:0001042!3.20e-10!24;UBERON:0008814!3.20e-10!24;UBERON:0009145!3.20e-10!24;UBERON:0002384!3.45e-10!46;UBERON:0002405!3.85e-09!70;UBERON:0000072!5.23e-09!27;UBERON:0003081!2.99e-08!88;UBERON:0005057!3.04e-07!51;UBERON:0000063!8.74e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.04e-16,23;UBERON:0000974,6.04e-16,23;UBERON:0004807,6.04e-16,23;UBERON:0005058,6.04e-16,23;UBERON:0003351,6.04e-16,23;UBERON:0009113,6.04e-16,23;UBERON:0003295,6.04e-16,23;UBERON:0009722,6.04e-16,23;UBERON:0005562,6.04e-16,23;UBERON:0007690,6.04e-16,23;UBERON:0006562,2.55e-15,24;UBERON:0003408,2.55e-15,24;UBERON:0001557,2.55e-15,24;UBERON:0001042,2.55e-15,24;UBERON:0008814,2.55e-15,24;UBERON:0009145,2.55e-15,24;UBERON:0000072,1.02e-13,27;UBERON:0004177,7.80e-13,29;UBERON:0005057,7.80e-13,29;UBERON:0000077,8.81e-11,35;UBERON:0007811,1.67e-10,36;UBERON:0000065,2.53e-09,41;UBERON:0001004,4.04e-09,42;UBERON:0000153,6.31e-09,43;UBERON:0002390,1.45e-08,45;UBERON:0003061,1.45e-08,45;UBERON:0002384,2.15e-08,46;UBERON:0002193,4.46e-08,48;UBERON:0002405,4.46e-08,48;UBERON:0003929,3.83e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,30.9735188733667,50.3238731592286,2.56826952338257,1.19658238493005,0.171200729931206,0,0.333109761815663,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Nfkbid | |||
}} |
Revision as of 13:12, 14 September 2013
Short description: | p6@Nfkbid |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Nfkbid_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 108bp_to_NM_172142, uc009gej.1_5end |
EntrezGene: | Nfkbid |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 6.04e-16 | 23 |
neck | 6.04e-16 | 23 |
respiratory system epithelium | 6.04e-16 | 23 |
hemolymphoid system gland | 6.04e-16 | 23 |
pharyngeal epithelium | 6.04e-16 | 23 |
thymic region | 6.04e-16 | 23 |
pharyngeal gland | 6.04e-16 | 23 |
entire pharyngeal arch endoderm | 6.04e-16 | 23 |
thymus primordium | 6.04e-16 | 23 |
early pharyngeal endoderm | 6.04e-16 | 23 |
pharynx | 2.55e-15 | 24 |
gland of gut | 2.55e-15 | 24 |
upper respiratory tract | 2.55e-15 | 24 |
chordate pharynx | 2.55e-15 | 24 |
pharyngeal arch system | 2.55e-15 | 24 |
pharyngeal region of foregut | 2.55e-15 | 24 |
segment of respiratory tract | 1.02e-13 | 27 |
hemopoietic organ | 7.80e-13 | 29 |
immune organ | 7.80e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 8.81e-11 | 35 |
craniocervical region | 1.67e-10 | 36 |
respiratory tract | 2.53e-09 | 41 |
respiratory system | 4.04e-09 | 42 |
anterior region of body | 6.31e-09 | 43 |
hematopoietic system | 1.45e-08 | 45 |
blood island | 1.45e-08 | 45 |
connective tissue | 2.15e-08 | 46 |
hemolymphoid system | 4.46e-08 | 48 |
immune system | 4.46e-08 | 48 |
gut epithelium | 3.83e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.