FFCP PHASE1:Mm9::chr9:69880251..69880255,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=306|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:69880251..69880255,-|id=chr9:69880251..69880255,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,7.01e-07,3;CL:0002202,7.01e-07,3;CL:0000069,7.01e-07,3;CL:0002632,7.01e-07,3;CL:0002368,7.01e-07,3;CL:0000307,7.01e-07,3;CL:0000377,7.01e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.81e-21!59;UBERON:0000160!5.76e-17!43;UBERON:0000344!6.62e-12!15;UBERON:0001242!4.95e-10!13;UBERON:0000060!4.95e-10!13;UBERON:0001262!4.95e-10!13;UBERON:0004786!4.95e-10!13;UBERON:0004119!3.60e-08!130;UBERON:0000925!3.60e-08!130;UBERON:0006595!3.60e-08!130;UBERON:0001007!6.03e-08!128;UBERON:0001555!6.03e-08!128;UBERON:0007026!6.03e-08!128;UBERON:0004921!5.38e-07!126;UBERON:0004185!5.38e-07!126;UBERON:0004923!8.33e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.29e-36,47;UBERON:0000160,8.19e-29,31;UBERON:0001007,7.74e-16,116;UBERON:0001555,7.74e-16,116;UBERON:0007026,7.74e-16,116;UBERON:0004119,1.97e-15,118;UBERON:0000925,1.97e-15,118;UBERON:0006595,1.97e-15,118;UBERON:0004921,7.81e-14,114;UBERON:0000344,1.79e-12,15;UBERON:0002108,2.45e-09,4;UBERON:0001242,2.47e-09,13;UBERON:0001262,2.47e-09,13;UBERON:0004786,2.47e-09,13;UBERON:0000945,2.90e-08,16;UBERON:0010039,2.90e-08,16;UBERON:0000331,1.70e-07,3;UBERON:0002116,1.70e-07,3;UBERON:0001204,1.70e-07,3;UBERON:0001168,1.70e-07,3;UBERON:0004923,4.85e-07,24;UBERON:0003126,7.01e-07,3;UBERON:0001005,7.01e-07,3;UBERON:0007196,7.01e-07,3;UBERON:0001558,7.01e-07,3|phase1_expression=0,0.348975407639361,0.454999239389536,0,4.50806156951712,3.69334398206158,10.5125688267987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.31979541542198,6.42345986988076,1.72269589234506,2.15380998079537,2.15471232685889,15.3918969759663,3.52842181663903,9.75614246883341,0,0,0,0.288851619751275,0.332469290716985,1.63335485009895,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0.35333957451034,0,0,0,0,4.5463118612355,4.56047757855178,4.54972000513305,5.1382745873577,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,31.6865994070808,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,6.08236303326152,0,0,0.902072229254653,1.61346819698674,0.22237804384487,1.33157938278791,4.74529061544512,5.59976446061637,4.52403375840485,5.37182474511107,3.50935356814416,5.39291645192533,10.8069024937347,9.75792238946399,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.488660878060728,4.61916344323099,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,108.832450453723,0,0.813277868507395,2.16010681643603,6.89991376847747,8.51613998610093,8.90104686139817,9.4224939526883,33.7665165159398,79.453978627869,0,1.69107881605257,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0.724752362478018,3.16833006883652,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr9:69880251..69880255,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=306 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:69880251..69880255,- | |||
|id=chr9:69880251..69880255,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.01e-07,3;CL:0002202,7.01e-07,3;CL:0000069,7.01e-07,3;CL:0002632,7.01e-07,3;CL:0002368,7.01e-07,3;CL:0000307,7.01e-07,3;CL:0000377,7.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.81e-21!59;UBERON:0000160!5.76e-17!43;UBERON:0000344!6.62e-12!15;UBERON:0001242!4.95e-10!13;UBERON:0000060!4.95e-10!13;UBERON:0001262!4.95e-10!13;UBERON:0004786!4.95e-10!13;UBERON:0004119!3.60e-08!130;UBERON:0000925!3.60e-08!130;UBERON:0006595!3.60e-08!130;UBERON:0001007!6.03e-08!128;UBERON:0001555!6.03e-08!128;UBERON:0007026!6.03e-08!128;UBERON:0004921!5.38e-07!126;UBERON:0004185!5.38e-07!126;UBERON:0004923!8.33e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.29e-36,47;UBERON:0000160,8.19e-29,31;UBERON:0001007,7.74e-16,116;UBERON:0001555,7.74e-16,116;UBERON:0007026,7.74e-16,116;UBERON:0004119,1.97e-15,118;UBERON:0000925,1.97e-15,118;UBERON:0006595,1.97e-15,118;UBERON:0004921,7.81e-14,114;UBERON:0000344,1.79e-12,15;UBERON:0002108,2.45e-09,4;UBERON:0001242,2.47e-09,13;UBERON:0001262,2.47e-09,13;UBERON:0004786,2.47e-09,13;UBERON:0000945,2.90e-08,16;UBERON:0010039,2.90e-08,16;UBERON:0000331,1.70e-07,3;UBERON:0002116,1.70e-07,3;UBERON:0001204,1.70e-07,3;UBERON:0001168,1.70e-07,3;UBERON:0004923,4.85e-07,24;UBERON:0003126,7.01e-07,3;UBERON:0001005,7.01e-07,3;UBERON:0007196,7.01e-07,3;UBERON:0001558,7.01e-07,3 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0,4.50806156951712,3.69334398206158,10.5125688267987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.31979541542198,6.42345986988076,1.72269589234506,2.15380998079537,2.15471232685889,15.3918969759663,3.52842181663903,9.75614246883341,0,0,0,0.288851619751275,0.332469290716985,1.63335485009895,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0.35333957451034,0,0,0,0,4.5463118612355,4.56047757855178,4.54972000513305,5.1382745873577,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,31.6865994070808,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.29544417878937,6.08236303326152,0,0,0.902072229254653,1.61346819698674,0.22237804384487,1.33157938278791,4.74529061544512,5.59976446061637,4.52403375840485,5.37182474511107,3.50935356814416,5.39291645192533,10.8069024937347,9.75792238946399,0,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0.709700426041343,0.35613120733451,0.488660878060728,4.61916344323099,0,0,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,108.832450453723,0,0.813277868507395,2.16010681643603,6.89991376847747,8.51613998610093,8.90104686139817,9.4224939526883,33.7665165159398,79.453978627869,0,1.69107881605257,0,0.165458490457098,0,0.129159823477731,0,0,0,0,0.724752362478018,3.16833006883652,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,0,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr9:69880251..69880255,- | |||
}} |
Revision as of 18:37, 14 September 2013
Short description: | p@chr9:69880251..69880255, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:69880251..69880255, - |
Coexpression cluster: | MCL_coexpression_mm9:306 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.01e-07 | 3 |
epithelial cell of tracheobronchial tree | 7.01e-07 | 3 |
branched duct epithelial cell | 7.01e-07 | 3 |
epithelial cell of lower respiratory tract | 7.01e-07 | 3 |
respiratory epithelial cell | 7.01e-07 | 3 |
tracheal epithelial cell | 7.01e-07 | 3 |
tracheoblast | 7.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.29e-36 | 47 |
intestine | 8.19e-29 | 31 |
digestive system | 7.74e-16 | 116 |
digestive tract | 7.74e-16 | 116 |
primitive gut | 7.74e-16 | 116 |
endoderm-derived structure | 1.97e-15 | 118 |
endoderm | 1.97e-15 | 118 |
presumptive endoderm | 1.97e-15 | 118 |
subdivision of digestive tract | 7.81e-14 | 114 |
mucosa | 1.79e-12 | 15 |
small intestine | 2.45e-09 | 4 |
intestinal mucosa | 2.47e-09 | 13 |
wall of intestine | 2.47e-09 | 13 |
gastrointestinal system mucosa | 2.47e-09 | 13 |
stomach | 2.90e-08 | 16 |
food storage organ | 2.90e-08 | 16 |
ileal mucosa | 1.70e-07 | 3 |
ileum | 1.70e-07 | 3 |
mucosa of small intestine | 1.70e-07 | 3 |
wall of small intestine | 1.70e-07 | 3 |
organ component layer | 4.85e-07 | 24 |
trachea | 7.01e-07 | 3 |
respiratory airway | 7.01e-07 | 3 |
tracheobronchial tree | 7.01e-07 | 3 |
lower respiratory tract | 7.01e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.