FFCP PHASE1:Hg19::chr1:66820058..66820083,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |||
|TSSclassifier=strong | |||
|UniProt=A5YW33 | |||
|association_with_transcript=0bp_to_ENST00000480109,uc009was.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_16_at_PDE4B_5end | |||
|id=chr1:66820058..66820083,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.09e-17!8;CL:0000540!5.38e-13!6;CL:0000031!5.38e-13!6;CL:0000404!5.38e-13!6;CL:0002322!7.49e-10!5;CL:0002319!3.51e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;4.51e-19;6!CL:0000404;4.51e-19;6!CL:0000047;6.39e-10;2!CL:0002319;2.08e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.99e-27,8;CL:0000540,3.95e-19,6;CL:0000031,3.95e-19,6;CL:0000404,3.95e-19,6;CL:0002319,2.05e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000031;4.51e-19;6!UBERON:0010122;3.06e-11;2!UBERON:0006601;1.59e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.33e-83!82;UBERON:0005743!9.00e-81!86;UBERON:0000073!1.36e-71!94;UBERON:0001016!1.36e-71!94;UBERON:0000955!5.63e-62!69;UBERON:0006238!5.63e-62!69;UBERON:0002616!4.33e-60!59;UBERON:0001049!7.12e-60!57;UBERON:0005068!7.12e-60!57;UBERON:0006241!7.12e-60!57;UBERON:0007135!7.12e-60!57;UBERON:0001869!6.08e-52!32;UBERON:0001893!8.81e-52!34;UBERON:0002020!1.38e-51!34;UBERON:0003528!1.38e-51!34;UBERON:0002780!3.62e-51!41;UBERON:0001890!3.62e-51!41;UBERON:0006240!3.62e-51!41;UBERON:0002791!8.90e-50!33;UBERON:0003080!1.00e-49!42;UBERON:0002619!2.16e-43!22;UBERON:0003075!4.02e-41!86;UBERON:0007284!4.02e-41!86;UBERON:0001950!1.72e-39!20;UBERON:0002346!1.07e-38!90;UBERON:0000956!1.48e-37!25;UBERON:0000203!1.48e-37!25;UBERON:0004121!5.76e-34!169;UBERON:0000033!3.19e-33!123;UBERON:0003056!4.06e-33!61;UBERON:0000924!8.61e-33!173;UBERON:0006601!8.61e-33!173;UBERON:0000153!5.28e-31!129;UBERON:0007811!5.28e-31!129;UBERON:0007023!2.11e-30!115;UBERON:0002420!1.17e-15!9;UBERON:0007245!1.17e-15!9;UBERON:0010009!1.17e-15!9;UBERON:0010011!1.17e-15!9;UBERON:0000454!1.17e-15!9;UBERON:0002308!3.15e-15!9;UBERON:0000125!3.15e-15!9;UBERON:0000200!2.20e-13!6;UBERON:0000025!2.57e-13!194;UBERON:0001871!3.50e-13!7;UBERON:0002021!6.14e-12!5;UBERON:0009663!6.75e-12!7;UBERON:0001872!1.18e-11!5;UBERON:0000349!2.08e-11!5;UBERON:0003076!2.18e-11!15;UBERON:0003057!2.18e-11!15;UBERON:0000369!2.02e-10!4;UBERON:0002435!2.02e-10!4;UBERON:0000204!2.02e-10!4;UBERON:0010082!2.02e-10!4;UBERON:0004733!2.51e-09!12;UBERON:0002028!2.51e-09!12;UBERON:0007277!2.51e-09!12;UBERON:0004111!6.91e-09!241;UBERON:0000922!7.74e-09!612;UBERON:0004732!1.68e-08!13;UBERON:0002298!2.31e-08!8;UBERON:0005383!2.57e-08!3;UBERON:0005382!2.57e-08!3;UBERON:0000477!4.39e-08!286;UBERON:0002771!2.09e-07!3;UBERON:0000468!4.07e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.19e-76;32!UBERON:0002791;8.37e-71;32!UBERON:0002619;7.74e-70;22!UBERON:0001893;2.02e-69;34!UBERON:0001950;9.35e-69;20!UBERON:0003528;9.23e-67;34!UBERON:0002020;9.23e-67;34!UBERON:0000956;2.89e-61;25!UBERON:0000203;2.89e-61;25!UBERON:0002780;1.69e-55;41!UBERON:0001890;1.69e-55;41!UBERON:0000073;2.15e-32;53!UBERON:0002616;2.15e-32;53!UBERON:0000955;3.15e-30;68!UBERON:0001017;4.23e-29;75!UBERON:0002420;1.61e-25;9!UBERON:0007245;1.61e-25;9!UBERON:0010009;1.61e-25;9!UBERON:0010011;1.61e-25;9!UBERON:0000454;1.61e-25;9!UBERON:0001016;2.45e-25;83!UBERON:0001871;2.48e-23;6!UBERON:0001872;3.76e-23;5!UBERON:0000369;1.83e-20;4!UBERON:0002435;1.83e-20;4!UBERON:0000204;1.83e-20;4!UBERON:0000200;1.68e-19;6!UBERON:0009663;9.88e-18;7!UBERON:0002021;2.65e-16;5!UBERON:0005383;5.22e-16;3!UBERON:0005382;5.22e-16;3!UBERON:0000349;4.04e-15;5!UBERON:0000125;9.94e-14;9!UBERON:0002308;9.94e-14;9!UBERON:0001873;3.06e-11;2!UBERON:0002771;1.39e-10;2!UBERON:0001876;6.39e-10;2!UBERON:0011216;1.81e-08;132!UBERON:0007023;3.26e-08;114!UBERON:0001870;3.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.56e-85,32;UBERON:0001893,1.29e-79,34;UBERON:0002791,5.19e-78,32;UBERON:0002780,1.04e-76,41;UBERON:0001890,1.04e-76,41;UBERON:0003080,1.04e-76,41;UBERON:0006240,1.04e-76,41;UBERON:0001017,9.74e-75,81;UBERON:0003528,3.12e-73,34;UBERON:0002020,3.12e-73,34;UBERON:0002619,6.81e-70,22;UBERON:0001950,7.55e-69,20;UBERON:0001016,1.08e-66,89;UBERON:0000956,2.58e-61,25;UBERON:0000203,2.58e-61,25;UBERON:0000073,2.74e-58,53;UBERON:0002616,2.74e-58,53;UBERON:0001049,6.80e-55,56;UBERON:0005068,6.80e-55,56;UBERON:0006241,6.80e-55,56;UBERON:0007135,6.80e-55,56;UBERON:0000955,1.26e-54,68;UBERON:0006238,1.26e-54,68;UBERON:0003056,5.76e-50,61;UBERON:0003075,9.46e-36,82;UBERON:0007284,9.46e-36,82;UBERON:0002346,8.04e-34,86;UBERON:0004121,1.11e-31,171;UBERON:0000924,1.11e-31,171;UBERON:0006601,1.11e-31,171;UBERON:0010371,5.87e-27,104;UBERON:0011216,1.29e-25,223;UBERON:0002420,1.53e-25,9;UBERON:0007245,1.53e-25,9;UBERON:0010009,1.53e-25,9;UBERON:0010011,1.53e-25,9;UBERON:0000454,1.53e-25,9;UBERON:0007023,3.29e-24,114;UBERON:0001871,2.39e-23,6;UBERON:0001872,3.13e-23,5;UBERON:0010314,1.04e-21,132;UBERON:0000369,1.40e-20,4;UBERON:0002435,1.40e-20,4;UBERON:0000204,1.40e-20,4;UBERON:0010082,1.40e-20,4;UBERON:0000200,2.21e-19,6;UBERON:0009663,9.73e-18,7;UBERON:0002021,3.22e-16,5;UBERON:0005383,4.62e-16,3;UBERON:0005382,4.62e-16,3;UBERON:0000349,3.76e-15,5;UBERON:0000125,9.82e-14,9;UBERON:0002308,9.82e-14,9;UBERON:0000025,7.22e-12,192;UBERON:0001873,2.84e-11,2;UBERON:0010122,2.84e-11,2;UBERON:0002771,1.98e-10,2;UBERON:0001876,6.11e-10,2;UBERON:0004111,2.55e-08,240;UBERON:0001870,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.397589304964456,0.348581828608555,0.10366105501537,1.26160425437814,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52456774533478,1.30139853857622,1.54657762555539,4.02039036802437,2.55175500661265,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,1.1253553312841,0,0,5.27813520319984,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,3.24688343566479,3.99227596002388,0,0,0,0,0,0.709163045303809,0,0,0,10.6288966297661,5.54743617676877,0,0.663475559587348,0.295547618953547,2.85201016300164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617819694732514,0.417687798021821,0.337005664903385,0,4.45102446878144,0,0,0,0,0,1.83643656978294,0.063186579628488,0,0.103688191397247,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0.0967563312890851,0.146178634172371,0,0,0.0882561266915003,0,0,0,4.17851253308799,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,3.00210144354895,0.410716136675979,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,3.18091875923721,0.817220436669454,0.160753148465019,1.37539436597234,1.66176135211674,0.2249738915515,0,3.34122561619136,0,0,0.262272940674991,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,7.44360215901975,0.500763722825999,0.573409195690071,0.110929051536852,0.18628920882415,0.276697269872462,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0.352675943690684,0,3.85375350578757,7.08482881627925,0.478901577171454,5.33302547025963,5.5455773168778,3.1120763608898,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02612753855184,2.34323429584154,1.65349437200947,1.58539525484767,3.82882366312754,0,0,0,0,0,0,0,0,0,0,0,0.475788130837822,3.15709313101676,0,0,0,7.8557794958001,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0.981542335574726,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,3.60354898011848,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0.267964130156178,0.829169439458779,1.24119595034274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@PDE4B | |||
}} |
Revision as of 18:57, 10 January 2014
Short description: | p16@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PDE4B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000480109, uc009was.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | A5YW33 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.99e-27 | 8 |
neuron | 3.95e-19 | 6 |
neuroblast | 3.95e-19 | 6 |
electrically signaling cell | 3.95e-19 | 6 |
neural cell | 2.05e-07 | 25 |