FFCP PHASE1:Hg19::chr1:249132512..249132547,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26179 | |||
|TSSclassifier=strong | |||
|UniProt=Q499Z4 | |||
|association_with_transcript=0bp_to_ENST00000505503,NM_024836,uc001iex.2_5end | |||
|description=CAGE_peak_2_at_ZNF672_5end | |||
|id=chr1:249132512..249132547,+ | |||
|ontology_enrichment_celltype=CL:0000557!5.80e-27!71;CL:0002009!2.98e-26!65;CL:0002194!2.10e-25!63;CL:0000576!2.10e-25!63;CL:0000040!2.10e-25!63;CL:0000559!2.10e-25!63;CL:0000839!3.91e-25!70;CL:0000766!2.97e-24!76;CL:0000860!1.89e-23!45;CL:0002057!2.77e-22!42;CL:0000763!7.49e-13!112;CL:0000049!7.49e-13!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-19;33!CL:0002057;1.07e-19;33!CL:0000473;9.21e-18;39!CL:0000234;9.21e-18;39!CL:0000576;3.90e-16;48!CL:0000766;3.96e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.24e-26,67;CL:0002009,1.05e-25,61;CL:0002194,7.30e-25,59;CL:0000576,7.30e-25,59;CL:0000040,7.30e-25,59;CL:0000559,7.30e-25,59;CL:0000839,1.58e-24,66;CL:0000473,5.93e-24,48;CL:0000234,5.93e-24,48;CL:0000766,1.07e-23,72;CL:0000860,2.68e-22,42;CL:0002057,2.68e-22,42;CL:0000763,4.00e-12,108;CL:0000049,4.00e-12,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.35e-25!80;UBERON:0001474!1.45e-22!86;UBERON:0000467!1.68e-22!625;UBERON:0000480!2.97e-22!626;UBERON:0000468!1.57e-20!659;UBERON:0000062!3.33e-20!511;UBERON:0003081!6.13e-19!216;UBERON:0002405!3.40e-18!115;UBERON:0000923!1.22e-17!604;UBERON:0005291!1.22e-17!604;UBERON:0006598!1.22e-17!604;UBERON:0002532!1.22e-17!604;UBERON:0000922!1.49e-17!612;UBERON:0002050!1.55e-17!605;UBERON:0005423!1.55e-17!605;UBERON:0002390!2.85e-17!102;UBERON:0003061!2.85e-17!102;UBERON:0002193!3.65e-17!112;UBERON:0004765!1.80e-16!101;UBERON:0001434!1.80e-16!101;UBERON:0000926!5.39e-15!448;UBERON:0004120!5.39e-15!448;UBERON:0006603!5.39e-15!448;UBERON:0007023!4.38e-09!115;UBERON:0002204!5.05e-09!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.36e-24,76;UBERON:0001474,7.38e-22,82;UBERON:0002405,6.46e-19,93;UBERON:0004765,2.80e-18,90;UBERON:0000922,7.03e-18,592;UBERON:0005423,1.14e-17,581;UBERON:0003081,8.34e-17,203;UBERON:0002390,1.71e-16,98;UBERON:0003061,1.71e-16,98;UBERON:0002193,2.20e-16,108;UBERON:0000923,1.69e-15,560;UBERON:0010316,1.69e-15,560;UBERON:0005291,1.69e-15,560;UBERON:0006598,1.69e-15,560;UBERON:0010317,1.69e-15,560;UBERON:0002532,1.69e-15,560;UBERON:0002050,6.87e-15,564;UBERON:0001434,7.19e-15,100;UBERON:0000926,8.68e-10,315;UBERON:0004120,8.68e-10,315;UBERON:0006603,8.68e-10,315;UBERON:0007023,5.10e-09,114;UBERON:0002204,6.37e-08,167 | |||
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| |||
|short_description=p2@ZNF672 | |||
}} |
Revision as of 01:17, 11 January 2014
Short description: | p2@ZNF672 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF672_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505503, NM_024836, uc001iex.2_5end |
EntrezGene: | ZNF672 |
HGNC: | 26179 |
UniProt: | Q499Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.24e-26 | 67 |
macrophage dendritic cell progenitor | 1.05e-25 | 61 |
monopoietic cell | 7.30e-25 | 59 |
monocyte | 7.30e-25 | 59 |
monoblast | 7.30e-25 | 59 |
promonocyte | 7.30e-25 | 59 |
myeloid lineage restricted progenitor cell | 1.58e-24 | 66 |
defensive cell | 5.93e-24 | 48 |
phagocyte | 5.93e-24 | 48 |
myeloid leukocyte | 1.07e-23 | 72 |
classical monocyte | 2.68e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.68e-22 | 42 |
myeloid cell | 4.00e-12 | 108 |
common myeloid progenitor | 4.00e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.36e-24 | 76 |
bone element | 7.38e-22 | 82 |
immune system | 6.46e-19 | 93 |
skeletal element | 2.80e-18 | 90 |
embryo | 7.03e-18 | 592 |
developing anatomical structure | 1.14e-17 | 581 |
lateral plate mesoderm | 8.34e-17 | 203 |
hematopoietic system | 1.71e-16 | 98 |
blood island | 1.71e-16 | 98 |
hemolymphoid system | 2.20e-16 | 108 |
germ layer | 1.69e-15 | 560 |
germ layer / neural crest | 1.69e-15 | 560 |
embryonic tissue | 1.69e-15 | 560 |
presumptive structure | 1.69e-15 | 560 |
germ layer / neural crest derived structure | 1.69e-15 | 560 |
epiblast (generic) | 1.69e-15 | 560 |
embryonic structure | 6.87e-15 | 564 |
skeletal system | 7.19e-15 | 100 |
mesoderm | 8.68e-10 | 315 |
mesoderm-derived structure | 8.68e-10 | 315 |
presumptive mesoderm | 8.68e-10 | 315 |
adult organism | 5.10e-09 | 114 |
musculoskeletal system | 6.37e-08 | 167 |