FFCP PHASE1:Hg19::chr10:64576105..64576133,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3239 | |||
|TSSclassifier=strong | |||
|UniProt=P11161 | |||
|association_with_transcript=0bp_to_ENST00000242480,ENST00000411732,NM_000399,NM_001136177,NM_001136179,uc001jmi.2,uc010qim.1,uc010qin.1_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_EGR2_5end | |||
|id=chr10:64576105..64576133,- | |||
|ontology_enrichment_celltype=CL:0000766!2.60e-27!76;CL:0000738!4.76e-27!140;CL:0000557!5.37e-24!71;CL:0002009!8.78e-24!65;CL:0002031!1.57e-23!124;CL:0002087!3.15e-23!119;CL:0002057!4.78e-23!42;CL:0000839!6.27e-23!70;CL:0002194!7.79e-23!63;CL:0000576!7.79e-23!63;CL:0000040!7.79e-23!63;CL:0000559!7.79e-23!63;CL:0000860!6.47e-20!45;CL:0000037!2.05e-15!172;CL:0000566!2.05e-15!172;CL:0000988!3.43e-15!182;CL:0002032!3.44e-15!165;CL:0000837!3.44e-15!165;CL:0000763!2.34e-12!112;CL:0000049!2.34e-12!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-21;33!CL:0002057;3.46e-21;33!CL:0000473;4.56e-21;39!CL:0000234;4.56e-21;39!CL:0000576;3.98e-15;48!CL:0000766;9.69e-14;69!CL:0002087;1.14e-08;104!CL:0000738;4.55e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.76e-32,72;CL:0000738,4.07e-30,136;CL:0000473,9.94e-30,48;CL:0000234,9.94e-30,48;CL:0002009,5.26e-29,61;CL:0000557,6.38e-29,67;CL:0002194,6.36e-28,59;CL:0000576,6.36e-28,59;CL:0000040,6.36e-28,59;CL:0000559,6.36e-28,59;CL:0000839,6.17e-27,66;CL:0002087,1.50e-26,115;CL:0002031,3.39e-26,120;CL:0000860,1.14e-25,42;CL:0002057,1.14e-25,42;CL:0000988,1.04e-17,177;CL:0000037,1.25e-17,168;CL:0002032,4.09e-17,161;CL:0000837,4.09e-17,161;CL:0000763,1.34e-14,108;CL:0000049,1.34e-14,108;CL:0000134,3.47e-08,354;CL:0002320,1.65e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;7.05e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.38e-30,98;UBERON:0003061,7.38e-30,98;UBERON:0002193,1.44e-26,108;UBERON:0002371,1.64e-26,76;UBERON:0001474,1.31e-24,82;UBERON:0002405,1.89e-24,93;UBERON:0004765,6.56e-20,90;UBERON:0001434,1.52e-16,100;UBERON:0003081,4.90e-10,203;UBERON:0002384,1.44e-07,371 | |||
|phase1_expression=1.99846217197612,0.856402095563933,0.704772020479856,0,0,0.872338524100369,2.53299878168311,6.94891860769514,3.65659879479774,0.737201809504527,0,0,0,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,1.88072832886853,0.572471974262113,0.547497700291537,2.25976751270645,71.6757745915783,64.4489627182074,72.5713403712123,16.1279353508051,19.5752993029578,14.0882672217629,0,0,0.369754010166788,0,0,2.64240395401362,14.9578760303607,9.6261334785668,9.76548918221333,0.671746422719773,10.6884909786263,2.06060454107349,16.5753992208704,55.1698877785662,20.8622292621522,305.41175449407,474.898910665209,640.472775011074,1058.42031135319,842.000242361154,993.698329991835,174.786060133466,239.474817609599,201.785465025569,137.981634884729,230.60569679888,384.95132885443,174.467818651414,274.39431815006,193.719149117109,105.882267359936,223.199832878606,118.916705398622,53.9789183849166,167.946026508577,217.987787148451,856.506699860238,675.320379354161,976.046668104794,31.4807741369352,173.090488914155,142.091611960957,17.7454440502031,16.1579267973433,13.6278119580444,6.06574608191074,5.10601435661121,4.66104201421532,3.99017841237748,4.17725022118089,2.55729815270488,5.27988733383968,2.18455444504853,7.11607403090844,2.56038133539904,2.40237592221607,13.7940585589076,2.64417949113945,5.72432252721218,5.12291672198504,8.22132065119314,4.58727873750275,1.32171328579026,7.8471198817415,0.790152254325231,1.37696839079683,4.32311839024081,4.72883447698871,0,0.651844533267181,0,0,7.24167969753628,0,0.221533894583621,1.35401931882508,0.896639238079726,0.780356085359269,2.46656856905514,1.10540007114339,0,0,0,0,0.339928028092699,0.383220493601921,0.68725489096526,0.506039384039006,0.95569624297229,0.651083453856419,0,2.86092726247768,1.02389288923535,7.49584359314075,3.55165878066025,0.821127996921047,4.23374160771938,3.4767225451856,2.75166367377318,9.75227465255847,18.1089232119982,1.40648818027883,0.361439152384566,0,0.579386075843295,9.54343136461319,8.27279279514481,20.7031249589309,4.43458794925128,17.4791223529321,9.36500389808645,0.364295288292542,0,164.870075976579,204.080052114741,180.290994463581,2.14641561874808,0,0,0.198762407366705,0,0,0,0.838998872419812,0.825354125820202,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,23.7204751384914,15.511210565933,0,6.46063537203914,0,5.03154887090231,0.860509862246441,1.06400514659507,0.560677600142307,0,1.72667283892012,7.46906484959439,0.808264032418128,0.163461903113459,1.96764655938411,20.74233328128,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,1.23633464639278,6.37112953356618,1.43723628363248,0,0.125118519871964,0,0,0.30648779579902,0.901428353439581,0.226864366320042,0.538168907066586,2.13557388818567,1.69545520927649,0.300091096084402,0.515262646192195,2.57640540045629,0.930584281657949,0.337552664482532,0.194874010322397,0,1.38074847963449,0.323292113637624,1.06502877754984,0.10075209822764,0.339121184620975,0,0,0,1.21973706129595,0.132529768321485,1.39432731443422,1.14027160516907,0.504641701751257,0,0,0,0,2.3218396401599,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0,4.85609409356116,0.491953754172454,0.514703430895577,0,0,0,0.740707561268237,0,0,0,9.27443239800615,20.7813388797404,0.144366447761074,0,0.190254152234598,0,0,12.5570673104573,264.892828137617,67.4785476790826,0,0,0,0,0,0.383382679165211,548.826847016081,0.704387472105808,18.2448741675879,2.59415916150531,18.4313952802515,0.952468414382536,1.14596527667483,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.1466765716419,67.7383790570755,0,0,2.92531928243358,0,0,0,0,2.43062589218851,0,0,0.325736184293735,3.55391948742546,0,0,0,0,138.651109930957,140.631985600995,261.434084958959,0.479249710983165,1.14861935834114,0,0.434343920002738,0,0.537182889719687,3.6988097517864,4.3346767244424,5.17506179662842,5.77543663258868,6.35236560556159,28.6307678486768,5.41302168944387,12.2286873694075,4.46557126157214,9.73709131131337,2.99161459204025,15.7477895105693,1.10422342547226,0,0.271265023699736,0.207970861530807,0.892144943985809,0.946214490203608,6.91134348457008,15.3482510861137,15.9185252839189,2.0694614258501,0.664225598535437,2.39679919104214,0.0868836144680828,2.74121620447837,0,8.06395301879261,8.41285383192606,8.00456683525833,0.303127571446259,0,0,0.992431231275107,1.53461973288062,0,0.640695746278505,0.511707249066704,1.93024705372329,0,4.78050050788232,19.1766663338177,2.21743321237285,4.15403543346897,0.929683027679674,0.846016147141356,0.802025881213139,0,0.918515585316854,1.63882051206045,0.262248829918848,0,0.231046011313244,0,0,0.422206515571503,0,0,0,0,0.812839312631559,0,0,0,0,0.219259876645935,0.522870902049801,0.256450125116389,0,3.90454073597164,2.88514832613622,0,0,0.574265537996172,1.95018073810956,0,4.73686519631398,2.92692372517824,3.22357716924872,1.24052915236078,0.107420244868274,0.290033387828457,0.852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| |||
|short_description=p1@EGR2 | |||
}} |
Revision as of 03:06, 11 January 2014
Short description: | p1@EGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EGR2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000242480, ENST00000411732, NM_000399, NM_001136177, NM_001136179, uc001jmi.2, uc010qim.1, uc010qin.1_5end |
EntrezGene: | EGR2 |
HGNC: | 3239 |
UniProt: | P11161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.76e-32 | 72 |
leukocyte | 4.07e-30 | 136 |
defensive cell | 9.94e-30 | 48 |
phagocyte | 9.94e-30 | 48 |
macrophage dendritic cell progenitor | 5.26e-29 | 61 |
granulocyte monocyte progenitor cell | 6.38e-29 | 67 |
monopoietic cell | 6.36e-28 | 59 |
monocyte | 6.36e-28 | 59 |
monoblast | 6.36e-28 | 59 |
promonocyte | 6.36e-28 | 59 |
myeloid lineage restricted progenitor cell | 6.17e-27 | 66 |
nongranular leukocyte | 1.50e-26 | 115 |
hematopoietic lineage restricted progenitor cell | 3.39e-26 | 120 |
classical monocyte | 1.14e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.14e-25 | 42 |
hematopoietic cell | 1.04e-17 | 177 |
hematopoietic stem cell | 1.25e-17 | 168 |
hematopoietic oligopotent progenitor cell | 4.09e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.09e-17 | 161 |
myeloid cell | 1.34e-14 | 108 |
common myeloid progenitor | 1.34e-14 | 108 |
mesenchymal cell | 3.47e-08 | 354 |
connective tissue cell | 1.65e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.38e-30 | 98 |
blood island | 7.38e-30 | 98 |
hemolymphoid system | 1.44e-26 | 108 |
bone marrow | 1.64e-26 | 76 |
bone element | 1.31e-24 | 82 |
immune system | 1.89e-24 | 93 |
skeletal element | 6.56e-20 | 90 |
skeletal system | 1.52e-16 | 100 |
lateral plate mesoderm | 4.90e-10 | 203 |
connective tissue | 1.44e-07 | 371 |