FFCP PHASE1:Hg19::chr10:124050485..124050505,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118663 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26340 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-90bp_to_ENST00000507495_5end | |||
|coexpression_cluster_id=C2042 | |||
|description=CAGE_peak_2_at_BTBD16_5end | |||
|id=chr10:124050485..124050505,+ | |||
|ontology_enrichment_celltype=CL:0000244!1.10e-22!4;CL:0000731!1.10e-22!4;CL:0001014!2.54e-11!2;CL:0001016!2.54e-11!2;CL:0002149!2.74e-08!6;CL:0002255!2.74e-08!6;CL:0002178!3.68e-08!3;CL:0000039!4.23e-07!7;CL:0000586!4.23e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.56e-43;4!CL:0000731;1.56e-43;4!CL:0002178;7.80e-15;3!CL:0000312;2.85e-09;5!CL:0000240;7.20e-08;6!CL:0000311;7.20e-08;6!CL:0000079;7.20e-08;6!CL:0000237;7.20e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.56e-43,4;CL:0000731,1.56e-43,4;CL:0002178,6.10e-15,3;CL:0000312,2.68e-09,5;CL:0000240,6.84e-08,6;CL:0000311,6.84e-08,6;CL:0000079,6.84e-08,6;CL:0000237,6.84e-08,6;CL:0000036,6.84e-08,6;CL:0000357,6.84e-08,6;CL:0000114,6.84e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.39e-11;1!CL:0000357;7.20e-08;6!CL:0000114;7.20e-08;6 | |||
|ontology_enrichment_disease=DOID:299!2.33e-09!25;DOID:3001!2.74e-08!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!3.55e-18!5;UBERON:0005910!3.63e-15!6;UBERON:0001042!4.18e-08!10;UBERON:0009145!4.18e-08!10;UBERON:0003975!6.37e-08!22;UBERON:0001723!1.04e-07!3;UBERON:0001033!1.04e-07!3;UBERON:0010056!1.04e-07!3;UBERON:0006562!2.23e-07!11;UBERON:0004119!5.66e-07!169;UBERON:0000925!5.66e-07!169;UBERON:0006595!5.66e-07!169;UBERON:0004175!6.70e-07!25;UBERON:0000996!9.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;6.51e-35;5!UBERON:0005910;3.69e-29;6!UBERON:0000945;2.55e-19;5!UBERON:0010039;2.55e-19;5!UBERON:0000486;9.91e-15;12!UBERON:0000996;8.64e-12;1!UBERON:0006554;6.64e-09;30!UBERON:0001008;6.64e-09;30!UBERON:0001041;2.96e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,6.51e-35,5;UBERON:0005910,3.69e-29,6;UBERON:0001008,3.14e-13,48;UBERON:0000945,2.38e-12,8;UBERON:0010039,2.38e-12,8;UBERON:0000996,7.76e-12,1;UBERON:0006554,1.99e-10,47;UBERON:0004119,3.97e-09,160;UBERON:0000925,3.97e-09,160;UBERON:0006595,3.97e-09,160;UBERON:0000162,2.68e-07,14;UBERON:0001353,2.68e-07,14;UBERON:0000163,2.68e-07,14;UBERON:0006866,2.68e-07,14;UBERON:0000164,2.68e-07,14;UBERON:0000931,2.68e-07,14;UBERON:0004122,7.65e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86575485194663,0,3.21692711717219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,46.0640748758216,26.9554361068201,35.4744122829341,31.2423824281465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67276215673701,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15658898038188,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,8.7064915077479,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0.694238953340524,0,0,0,0,0,0,0,0,0,0,0,0,0,24.83502560732,0,0,0,3.45817001169854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,1.5476039091159,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,2.35479278551542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93061915699296,0,0,1.96300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,1.22574160876953,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,0,0,0,0,0,0.0898252021065869,0,0,0,2.66302709674205,0,0 | |||
|short_description=p2@BTBD16 | |||
}} |
Revision as of 05:22, 11 January 2014
Short description: | p2@BTBD16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BTBD16_5end |
Coexpression cluster: | C2042_Urothelial_gall_adenocarcinoma_choriocarcinoma_signet_gastric_bladder |
Association with transcript: | -90bp_to_ENST00000507495_5end |
EntrezGene: | BTBD16 |
HGNC: | 26340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.56e-43 | 4 |
urothelial cell | 1.56e-43 | 4 |
epithelial cell of stomach | 6.10e-15 | 3 |
keratinocyte | 2.68e-09 | 5 |
stratified squamous epithelial cell | 6.84e-08 | 6 |
keratin accumulating cell | 6.84e-08 | 6 |
stratified epithelial cell | 6.84e-08 | 6 |
keratinizing barrier epithelial cell | 6.84e-08 | 6 |
epithelial fate stem cell | 6.84e-08 | 6 |
stratified epithelial stem cell | 6.84e-08 | 6 |
surface ectodermal cell | 6.84e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
urothelium | 6.51e-35 | 5 |
transitional epithelium | 3.69e-29 | 6 |
renal system | 3.14e-13 | 48 |
stomach | 2.38e-12 | 8 |
food storage organ | 2.38e-12 | 8 |
vagina | 7.76e-12 | 1 |
urinary system structure | 1.99e-10 | 47 |
endoderm-derived structure | 3.97e-09 | 160 |
endoderm | 3.97e-09 | 160 |
presumptive endoderm | 3.97e-09 | 160 |
cloaca | 2.68e-07 | 14 |
anal region | 2.68e-07 | 14 |
embryonic cloaca | 2.68e-07 | 14 |
terminal part of digestive tract | 2.68e-07 | 14 |
primitive urogenital sinus | 2.68e-07 | 14 |
proctodeum | 2.68e-07 | 14 |
genitourinary system | 7.65e-07 | 15 |