FFCP PHASE1:Hg19::chr11:35252320..35252338,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=960 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1681 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=254bp_to_AB073901_5end | |||
|coexpression_cluster_id=C620 | |||
|description=CAGE_peak_13_at_CD44_5end | |||
|id=chr11:35252320..35252338,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.87e-21!42;CL:0000860!1.91e-20!45;CL:0000557!1.48e-19!71;CL:0002009!1.76e-19!65;CL:0000839!3.29e-19!70;CL:0002194!5.94e-19!63;CL:0000576!5.94e-19!63;CL:0000040!5.94e-19!63;CL:0000559!5.94e-19!63;CL:0000766!1.45e-17!76;CL:0002371!1.12e-11!591;CL:0000048!4.79e-11!430;CL:0000763!5.11e-11!112;CL:0000049!5.11e-11!112;CL:0000723!9.15e-11!436;CL:0002320!2.67e-10!365;CL:0000144!3.29e-10!625;CL:0000134!3.33e-10!358;CL:0000003!9.62e-10!722;CL:0000219!1.07e-09!390;CL:0000034!2.09e-09!444;CL:0002031!5.06e-09!124;CL:0000548!1.04e-08!679;CL:0000004!1.04e-08!679;CL:0000255!1.04e-08!679;CL:0000012!1.99e-08!682;CL:0002087!3.75e-08!119;CL:0000738!1.88e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.24e-32;33!CL:0002057;6.24e-32;33!CL:0000473;1.63e-26;39!CL:0000234;1.63e-26;39!CL:0000576;7.72e-16;48!CL:0000766;6.19e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.85e-31,48;CL:0000234,2.85e-31,48;CL:0000860,2.31e-30,42;CL:0002057,2.31e-30,42;CL:0000557,1.39e-26,67;CL:0000839,6.22e-26,66;CL:0002194,2.57e-25,59;CL:0000576,2.57e-25,59;CL:0000040,2.57e-25,59;CL:0000559,2.57e-25,59;CL:0002009,2.81e-25,61;CL:0000766,1.70e-24,72;CL:0000048,8.92e-16,427;CL:0000723,1.55e-15,433;CL:0000034,1.68e-14,441;CL:0000219,3.42e-14,386;CL:0000134,6.83e-14,354;CL:0000763,1.13e-13,108;CL:0000049,1.13e-13,108;CL:0002320,2.47e-13,361;CL:0002031,2.64e-11,120;CL:0002087,2.64e-09,115;CL:0000738,3.82e-09,136;CL:0002032,9.85e-07,161;CL:0000837,9.85e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.83e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.59e-18!80;UBERON:0002204!4.17e-17!167;UBERON:0001474!6.28e-15!86;UBERON:0004765!6.41e-15!101;UBERON:0001434!6.41e-15!101;UBERON:0002390!6.79e-14!102;UBERON:0003061!6.79e-14!102;UBERON:0002193!9.49e-11!112;UBERON:0002384!5.10e-10!375;UBERON:0002405!2.00e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.96e-25,76;UBERON:0001474,1.24e-21,82;UBERON:0004765,1.61e-20,90;UBERON:0002204,2.44e-19,167;UBERON:0001434,8.98e-19,100;UBERON:0002405,9.19e-18,93;UBERON:0002390,6.61e-17,98;UBERON:0003061,6.61e-17,98;UBERON:0002193,9.19e-14,108;UBERON:0002384,5.51e-13,371;UBERON:0000926,3.23e-09,315;UBERON:0004120,3.23e-09,315;UBERON:0006603,3.23e-09,315;UBERON:0003081,1.54e-08,203 | |||
|phase1_expression=0.908391896352783,3.42560838225573,1.12763523276777,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.263766978228454,0.866364470720326,0.331397375727916,2.6893005858071,1.20538905604795,2.92124036154949,1.95173119516203,0.123121058076788,0.408001382488506,0.313454721478088,0,1.77936752594749,1.63205431473244,0.0764134057479513,0.164201178899891,0.393553906568396,0,0.383829398097213,0.928896739896456,0,0,0.369754010166788,0,0,0,1.10799081706375,2.4065333696417,0.868043482863407,0.671746422719773,0.647787332037959,0.257575567634187,5.23433659606433,6.42389104270976,5.33684934613196,7.43772918098191,5.75635043230556,7.74265927237759,4.60307827715441,8.19714260893122,2.36482229888585,3.7922024881028,4.51839278508678,2.70852973188684,12.9887214284397,10.3704337021981,3.82029923556644,7.34601341690166,3.53021929783703,5.75403413219137,2.30895910130701,9.17532825059507,5.96714650745772,13.6398342155434,6.24123747160254,6.85104473895132,8.29120595347253,10.429658368404,3.9093992046921,8.47559303686716,5.89244217580104,8.86094684834476,1.26753171787165,1.27562579979026,0.838634582033504,1.12328631146495,2.10247649978109,1.28580469357664,0,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0.393419540227666,2.35806457649499,2.2616164889946,0.167186495390678,1.30368906653436,0.473447805734733,0,0.668462741311041,1.47302953737419,0.886135578334485,1.89562704635511,0.384273959177026,0,0.657751618414705,1.38175008892924,0.869409257205157,0.889719378972363,0.535081656179426,1.04535523804977,0.566546713487831,1.14966148080576,1.37450978193052,1.26509846009751,0.318565414324097,0.651083453856419,0,0.301150238155546,0.76791966692651,0,0.473554504088034,0,0.604820229674197,1.33720097891754,0.434473211648397,0,0,0.12786256184353,2.1686349143074,1.00267582127178,2.60723734129483,0.795285947051099,0.486634870302636,0.189069634328136,0.665188192387692,0.263504357079378,0.261958150995425,0.364295288292542,0,1.29818957461873,1.0447784237956,1.86141144726411,0.238490624305342,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.759783069987479,0.397227542439656,1.43418310374407,2.83734705758686,0,1.06748995729705,0.74000264525148,0,0,0.326923806226917,0,0,0,0.936480230490962,0,2.24173020827702,0,0.485618833104395,0.561803226808994,1.22492502752936,0.737005903870608,0.723280468230358,1.18800285728205,2.71993622206413,0,0.718618141816238,0.336672227908132,0.750711119231785,0,0.877955241761676,0.30648779579902,0.150238058906597,0.113432183160021,3.94657198515496,1.06778694409284,0.847727604638247,9.00273288253207,1.95799805553034,0.772921620136887,2.23340227597908,7.42615861861571,1.36411807225678,1.26216887122057,0.368199594569197,3.55621325001386,4.61512470271599,1.5112814734146,1.01736355386293,0.57978255948989,1.36373060295417,1.72082757233402,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,2.16563844500876,0.946454400318751,0.505754070234305,0.241011029883482,0.220587945464788,0,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,0,0,0,0,0,0.686271241194102,2.30475599358114,0,0.502644862058154,0.370353780634118,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0,0,0,0,0,0.492434012174795,1.63802985597466,1.48631162288728,0.93733833986777,1.17587489739202,1.13420077793909,0.447792613514241,0.871901815541886,0.766765358330422,0,1.40877494421162,4.35389042635621,1.29707958075265,2.14612136824846,0.507983154337352,1.14596527667483,2.34434894420094,0,1.02827492703324,0.901029173531752,3.71574362419752,0.112131084345361,0,0.22001485746285,1.29271715757778,0,1.690605505112,1.86156681609409,3.12022310734098,0,1.41849132023278,0,0.428933980974443,0,0,0,0,0,1.80863626235752,0,3.19913571782583,0,1.50677127429638,10.5416969741516,0.239624855491583,0,1.42636905040718,1.44781306667579,1.43833425785268,0.537182889719687,0.448340575974109,0.197030760201927,0.215627574859517,0.513372145118994,2.03275699377971,0,0,0.167516265334349,0,1.49801404789436,0,1.24324654030811,0.858840442033979,1.00034104211935,0.542530047399471,0.831883446123229,2.49800584316026,1.41932173530541,0.585707074963566,0,0,0,0,0.737476674166813,2.34585759063824,0,0,0.620304078368662,0.862856803274467,0.426910231213777,0,0,0.30239029332968,2.23297027036899,0.767309866440312,2.80660094433074,0.640695746278505,0,2.2519548960105,0,2.7757744884478,1.59805552781814,1.47828880824856,6.75030757938707,1.62694529843943,0.120859449591622,4.41114234667227,0.184161977871793,2.64073230778596,4.37018803216121,2.49136388422906,0.451199612907412,0.308061348417659,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.647747748306418,0,0,0,0.509752546090077,0,0.447749509444357,0.219259876645935,0.261435451024901,0,0,0,0.103041011647722,0,0,0,3.90036147621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| |||
|short_description=p13@CD44 | |||
}} |
Revision as of 07:17, 11 January 2014
Short description: | p13@CD44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CD44_5end |
Coexpression cluster: | C620_CD14_Smooth_Fibroblast_Mast_signet_normal_meningioma |
Association with transcript: | 254bp_to_AB073901_5end |
EntrezGene: | CD44 |
HGNC: | 1681 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.85e-31 | 48 |
phagocyte | 2.85e-31 | 48 |
classical monocyte | 2.31e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-30 | 42 |
granulocyte monocyte progenitor cell | 1.39e-26 | 67 |
myeloid lineage restricted progenitor cell | 6.22e-26 | 66 |
monopoietic cell | 2.57e-25 | 59 |
monocyte | 2.57e-25 | 59 |
monoblast | 2.57e-25 | 59 |
promonocyte | 2.57e-25 | 59 |
macrophage dendritic cell progenitor | 2.81e-25 | 61 |
myeloid leukocyte | 1.70e-24 | 72 |
multi fate stem cell | 8.92e-16 | 427 |
somatic stem cell | 1.55e-15 | 433 |
stem cell | 1.68e-14 | 441 |
motile cell | 3.42e-14 | 386 |
mesenchymal cell | 6.83e-14 | 354 |
myeloid cell | 1.13e-13 | 108 |
common myeloid progenitor | 1.13e-13 | 108 |
connective tissue cell | 2.47e-13 | 361 |
hematopoietic lineage restricted progenitor cell | 2.64e-11 | 120 |
nongranular leukocyte | 2.64e-09 | 115 |
leukocyte | 3.82e-09 | 136 |
hematopoietic oligopotent progenitor cell | 9.85e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.85e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.96e-25 | 76 |
bone element | 1.24e-21 | 82 |
skeletal element | 1.61e-20 | 90 |
musculoskeletal system | 2.44e-19 | 167 |
skeletal system | 8.98e-19 | 100 |
immune system | 9.19e-18 | 93 |
hematopoietic system | 6.61e-17 | 98 |
blood island | 6.61e-17 | 98 |
hemolymphoid system | 9.19e-14 | 108 |
connective tissue | 5.51e-13 | 371 |
mesoderm | 3.23e-09 | 315 |
mesoderm-derived structure | 3.23e-09 | 315 |
presumptive mesoderm | 3.23e-09 | 315 |
lateral plate mesoderm | 1.54e-08 | 203 |