FFCP PHASE1:Hg19::chr11:109959078..109959102,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_at_chr11:109959078..109959102,+ | |||
|id=chr11:109959078..109959102,+ | |||
|ontology_enrichment_celltype=CL:0002009!9.82e-52!65;CL:0000557!6.33e-49!71;CL:0002194!1.80e-47!63;CL:0000576!1.80e-47!63;CL:0000040!1.80e-47!63;CL:0000559!1.80e-47!63;CL:0000839!1.55e-46!70;CL:0002057!4.82e-44!42;CL:0000766!6.63e-42!76;CL:0000763!7.12e-41!112;CL:0000049!7.12e-41!112;CL:0000860!1.63e-40!45;CL:0000738!7.05e-38!140;CL:0002031!2.66e-37!124;CL:0002032!1.66e-34!165;CL:0000837!1.66e-34!165;CL:0000037!6.33e-34!172;CL:0000566!6.33e-34!172;CL:0002087!1.09e-33!119;CL:0000988!3.13e-31!182;CL:0000219!1.34e-17!390;CL:0000990!4.96e-16!8;CL:0000134!1.73e-15!358;CL:0002320!7.09e-15!365;CL:0000451!7.59e-13!10;CL:0000453!9.60e-13!5;CL:0000048!2.16e-11!430;CL:0000723!5.25e-11!436;CL:0000034!1.64e-10!444;CL:0000840!3.78e-10!5;CL:0001029!3.78e-10!5;CL:0000148!6.67e-09!10;CL:0000541!6.67e-09!10;CL:0002619!1.07e-08!3;CL:0000063!1.89e-08!578;CL:0001014!8.55e-07!2;CL:0001016!8.55e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.01e-46;33!CL:0002057;5.01e-46;33!CL:0000473;1.68e-41;39!CL:0000234;1.68e-41;39!CL:0000576;1.53e-31;48!CL:0000766;1.71e-19;69!CL:0002619;4.26e-19;3!CL:0001014;1.94e-14;2!CL:0001016;1.94e-14;2!CL:0002087;8.94e-11;104!CL:0000148;2.96e-10;10!CL:0000763;5.15e-10;100!CL:0000738;2.02e-09;136!CL:0002567;2.43e-09;3!CL:0002566;2.10e-07;1!CL:0000147;2.36e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,7.25e-54,61;CL:0000557,1.05e-48,67;CL:0002194,3.74e-46,59;CL:0000576,3.74e-46,59;CL:0000040,3.74e-46,59;CL:0000559,3.74e-46,59;CL:0000473,2.11e-43,48;CL:0000234,2.11e-43,48;CL:0000839,7.09e-41,66;CL:0000860,9.10e-40,42;CL:0002057,9.10e-40,42;CL:0000766,3.71e-37,72;CL:0000763,1.26e-28,108;CL:0000049,1.26e-28,108;CL:0002031,7.79e-28,120;CL:0002087,4.09e-24,115;CL:0000738,5.13e-24,136;CL:0002032,1.48e-19,161;CL:0000837,1.48e-19,161;CL:0002619,4.26e-19,3;CL:0000037,1.53e-18,168;CL:0000988,2.34e-17,177;CL:0001014,1.95e-14,2;CL:0001016,1.95e-14,2;CL:0000148,3.04e-10,10;CL:0000541,3.04e-10,10;CL:0000219,3.38e-10,386;CL:0002567,2.87e-09,3;CL:0000134,8.22e-08,354;CL:0002320,1.47e-07,361;CL:0002566,1.80e-07,1;CL:0000147,2.40e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-29;42!CL:0000049;5.09e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;4.57e-08;1!DOID:0050177;4.57e-08;1!DOID:0050427;4.57e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.57e-08,1;DOID:0050177,4.57e-08,1;DOID:0050427,4.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!5.56e-45!86;UBERON:0002371!3.83e-42!80;UBERON:0004765!2.36e-38!101;UBERON:0001434!2.36e-38!101;UBERON:0002390!8.49e-36!102;UBERON:0003061!8.49e-36!102;UBERON:0002193!1.61e-31!112;UBERON:0002405!1.74e-30!115;UBERON:0002204!1.58e-20!167;UBERON:0002384!4.85e-14!375;UBERON:0003081!2.70e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,1.36e-42,82;UBERON:0002371,1.80e-42,76;UBERON:0004765,1.99e-38,90;UBERON:0001434,3.79e-34,100;UBERON:0002405,6.05e-34,93;UBERON:0002390,5.41e-32,98;UBERON:0003061,5.41e-32,98;UBERON:0002193,1.26e-28,108;UBERON:0002204,1.37e-18,167;UBERON:0003081,4.46e-13,203;UBERON:0000926,1.46e-07,315;UBERON:0004120,1.46e-07,315;UBERON:0006603,1.46e-07,315;UBERON:0002384,3.26e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,0,0,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.217010870715852,2.01523926815932,1.6194683300949,1.28787783817093,0,0.377875943688809,0,1.62700325833979,2.46700732813095,3.09706370895104,0.28769239232215,0.768482119587302,0.709446689665756,2.06847408441971,7.10033151942209,4.06279459783025,0,1.09162460023138,1.12361742222542,1.53041946185451,3.20929027076094,1.91801137739712,0,0.398927315243264,0,2.03146467040009,2.26954089876456,0.622822248995575,0.251248665256743,1.0429658368404,0.65156653411535,1.81619850790011,5.15588690382591,5.69632297393592,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,1.58744735730423,3.05590740446622,1.17217447210047,0,0.514137463516618,0.600686115687835,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,2.43247561282381,2.00902836572851,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13843818411917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9462926003131,10.0594254092533,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39241355481392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.784445169039 | |||
|short_description=p@chr11:109959078..109959102,+ | |||
}} |
Revision as of 10:13, 11 January 2014
Short description: | p@chr11:109959078..109959102, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:109959078..109959102, + |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 1.36e-42 | 82 |
bone marrow | 1.80e-42 | 76 |
skeletal element | 1.99e-38 | 90 |
skeletal system | 3.79e-34 | 100 |
immune system | 6.05e-34 | 93 |
hematopoietic system | 5.41e-32 | 98 |
blood island | 5.41e-32 | 98 |
hemolymphoid system | 1.26e-28 | 108 |
musculoskeletal system | 1.37e-18 | 167 |
lateral plate mesoderm | 4.46e-13 | 203 |
mesoderm | 1.46e-07 | 315 |
mesoderm-derived structure | 1.46e-07 | 315 |
presumptive mesoderm | 1.46e-07 | 315 |
connective tissue | 3.26e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.57e-08 | 1 |
monogenic disease | 4.57e-08 | 1 |
xeroderma pigmentosum | 4.57e-08 | 1 |