FFCP PHASE1:Hg19::chr11:125439301..125439385,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9538 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13276 | |||
|TSSclassifier=strong | |||
|UniProt=E9PS58,E9PM05 | |||
|association_with_transcript=0bp_to_ENST00000524723,ENST00000525737,ENST00000527628,ENST00000527842,ENST00000529765,ENST00000531350,ENST00000531636,ENST00000534430,ENST00000534546,ENST00000535422_5end | |||
|description=CAGE_peak_1_at_EI24_5end | |||
|id=chr11:125439301..125439385,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.71e-30!246;CL:0002321!4.14e-30!248;CL:0000066!2.94e-27!254;CL:0000222!2.74e-14!119;CL:0002139!3.85e-10!24;CL:0002078!6.52e-10!44;CL:0000076!1.59e-09!62;CL:0000213!2.52e-09!57;CL:0000215!2.52e-09!57;CL:0000115!2.89e-09!35;CL:0000071!1.37e-08!18;CL:0002546!1.37e-08!18;CL:0002077!4.42e-08!33;CL:0000223!1.33e-07!59;CL:0000221!1.36e-07!71;CL:0000055!4.86e-07!180;CL:0002076!8.50e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.09e-10;24!CL:0000071;1.29e-08;18!CL:0000115;1.89e-08;36!CL:0002077;3.37e-07;34!CL:0002078;3.96e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.70e-30,250;CL:0000066,2.13e-27,253;CL:0000222,1.42e-14,121;CL:0002078,2.01e-10,45;CL:0002139,3.85e-10,24;CL:0000115,8.53e-10,36;CL:0000213,8.65e-10,58;CL:0000215,8.65e-10,58;CL:0000076,1.84e-09,63;CL:0000071,1.37e-08,18;CL:0002546,1.37e-08,18;CL:0002077,5.81e-08,34;CL:0000223,1.19e-07,58;CL:0000221,1.46e-07,72;CL:0002076,7.33e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002546;1.29e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.30e-18!238;UBERON:0009142!1.30e-18!238;UBERON:0000119!9.75e-16!312;UBERON:0002100!2.29e-15!216;UBERON:0000481!2.61e-15!347;UBERON:0000483!3.99e-15!309;UBERON:0000490!1.77e-14!138;UBERON:0003914!1.45e-13!118;UBERON:0005256!3.96e-13!143;UBERON:0002049!4.38e-12!79;UBERON:0007798!4.38e-12!79;UBERON:0000055!1.59e-11!69;UBERON:0000475!5.83e-10!365;UBERON:0000477!8.34e-10!286;UBERON:0000487!1.62e-09!22;UBERON:0001981!2.49e-09!60;UBERON:0007500!2.49e-09!60;UBERON:0004537!2.49e-09!60;UBERON:0006965!2.49e-09!60;UBERON:0004119!4.34e-09!169;UBERON:0000925!4.34e-09!169;UBERON:0006595!4.34e-09!169;UBERON:0009569!5.09e-09!113;UBERON:0006914!6.48e-09!25;UBERON:0004111!9.09e-09!241;UBERON:0001986!1.37e-08!18;UBERON:0004638!1.37e-08!18;UBERON:0004852!1.37e-08!18;UBERON:0004872!2.20e-08!84;UBERON:0000486!3.56e-08!82;UBERON:0006554!7.14e-08!44;UBERON:0005177!1.40e-07!107;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61;UBERON:0001008!2.23e-07!45;UBERON:0005172!3.27e-07!55;UBERON:0005173!3.27e-07!55;UBERON:0001007!3.44e-07!155;UBERON:0001555!3.44e-07!155;UBERON:0007026!3.44e-07!155;UBERON:0000064!3.95e-07!219;UBERON:0000914!9.84e-07!83;UBERON:0002329!9.84e-07!83;UBERON:0003077!9.84e-07!83;UBERON:0003059!9.84e-07!83;UBERON:0007282!9.84e-07!83;UBERON:0009618!9.84e-07!83;UBERON:0007285!9.84e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.56e-09;22!UBERON:0006914;6.37e-09;25!UBERON:0004638;1.29e-08;18!UBERON:0001986;1.29e-08;18!UBERON:0004852;1.29e-08;18!UBERON:0000490;2.16e-08;33!UBERON:0006554;1.81e-07;30!UBERON:0001008;1.81e-07;30!UBERON:0003914;7.60e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.21e-15,199;UBERON:0000490,3.51e-15,148;UBERON:0000119,3.89e-15,309;UBERON:0000483,1.55e-14,306;UBERON:0003914,1.01e-13,117;UBERON:0003104,1.54e-13,160;UBERON:0009142,1.54e-13,160;UBERON:0002049,7.40e-12,78;UBERON:0007798,7.40e-12,78;UBERON:0000055,2.69e-11,68;UBERON:0005256,6.75e-11,122;UBERON:0000487,1.62e-09,22;UBERON:0007500,4.14e-09,59;UBERON:0001981,4.14e-09,59;UBERON:0004537,4.14e-09,59;UBERON:0006965,4.14e-09,59;UBERON:0009569,4.90e-09,112;UBERON:0006914,6.48e-09,25;UBERON:0004111,9.32e-09,240;UBERON:0004638,1.37e-08,18;UBERON:0001986,1.37e-08,18;UBERON:0004852,1.37e-08,18;UBERON:0004119,1.52e-08,160;UBERON:0000925,1.52e-08,160;UBERON:0006595,1.52e-08,160;UBERON:0005177,1.63e-08,101;UBERON:0006554,2.42e-08,47;UBERON:0004872,3.48e-08,83;UBERON:0000486,4.84e-08,83;UBERON:0007503,7.44e-08,78;UBERON:0001008,7.62e-08,48;UBERON:0002417,1.15e-07,60;UBERON:0000916,1.15e-07,60;UBERON:0005172,2.22e-07,54;UBERON:0005173,2.22e-07,54;UBERON:0001007,9.36e-07,145;UBERON:0001555,9.36e-07,145;UBERON:0007026,9.36e-07,145 | |||
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1 | |||
|short_description=p1@EI24 | |||
}} |
Revision as of 11:05, 11 January 2014
Short description: | p1@EI24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EI24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000524723, ENST00000525737, ENST00000527628, ENST00000527842, ENST00000529765, ENST00000531350, ENST00000531636, ENST00000534430, ENST00000534546, ENST00000535422_5end |
EntrezGene: | EI24 |
HGNC: | 13276 |
UniProt: | E9PS58E9PM05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.70e-30 | 250 |
epithelial cell | 2.13e-27 | 253 |
mesodermal cell | 1.42e-14 | 121 |
meso-epithelial cell | 2.01e-10 | 45 |
endothelial cell of vascular tree | 3.85e-10 | 24 |
endothelial cell | 8.53e-10 | 36 |
lining cell | 8.65e-10 | 58 |
barrier cell | 8.65e-10 | 58 |
squamous epithelial cell | 1.84e-09 | 63 |
blood vessel endothelial cell | 1.37e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.37e-08 | 18 |
ecto-epithelial cell | 5.81e-08 | 34 |
endodermal cell | 1.19e-07 | 58 |
ectodermal cell | 1.46e-07 | 72 |
endo-epithelial cell | 7.33e-07 | 42 |