FFCP PHASE1:Hg19::chr12:10875481..10875504,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000536107_5end | |||
|description=CAGE_peak_14_at_CSDA_5end | |||
|id=chr12:10875481..10875504,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002379;3.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,2.23e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-07;1!UBERON:0010227;3.10e-07;1!UBERON:0010226;3.10e-07;1!UBERON:0005425;3.10e-07;1!UBERON:0004874;3.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;3.10e-07;1!DOID:3565;3.10e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,2.23e-07,1;DOID:3565,2.23e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.96e-13;11!UBERON:0001723;7.99e-09;3!UBERON:0004151;7.99e-09;3!UBERON:0001033;7.99e-09;3!UBERON:0002084;3.10e-07;1!UBERON:0002079;3.10e-07;1!UBERON:0000989;3.10e-07;1!UBERON:0000941;3.10e-07;1!UBERON:0001389;3.10e-07;1!UBERON:0001301;3.10e-07;1!UBERON:0000026;3.10e-07;1!UBERON:0008784;3.10e-07;1!UBERON:0001785;3.10e-07;1!UBERON:0002464;3.10e-07;1!UBERON:0004904;3.10e-07;1!UBERON:0006058;3.10e-07;1!UBERON:0008811;3.10e-07;1!UBERON:0003663;3.10e-07;1!UBERON:0004256;3.10e-07;1!UBERON:0001021;3.10e-07;1!UBERON:0002082;3.10e-07;1!UBERON:0004708;3.10e-07;1!UBERON:0002101;3.10e-07;1!UBERON:0004709;3.10e-07;1!UBERON:0002529;3.10e-07;1!UBERON:0010538;3.10e-07;1!UBERON:0003661;3.10e-07;1!UBERON:0010890;3.10e-07;1!UBERON:0002471;3.10e-07;1!UBERON:0001383;3.10e-07;1!UBERON:0010758;3.10e-07;1!UBERON:0010707;3.10e-07;1!UBERON:0000978;3.10e-07;1!UBERON:0002103;3.10e-07;1!UBERON:0001665;3.10e-07;1!UBERON:0003823;3.10e-07;1!UBERON:0000154;3.10e-07;1!UBERON:0010709;3.10e-07;1!UBERON:0000473;3.55e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.49e-13,11;UBERON:0004151,5.19e-09,3;UBERON:0001723,1.75e-08,3;UBERON:0001033,1.75e-08,3;UBERON:0010056,1.75e-08,3;UBERON:0000989,1.63e-07,1;UBERON:0008811,1.63e-07,1;UBERON:0006258,1.63e-07,1;UBERON:0005876,1.63e-07,1;UBERON:0004874,1.63e-07,1;UBERON:0000473,1.97e-07,8;UBERON:0002079,1.97e-07,1;UBERON:0000941,2.09e-07,1;UBERON:0001785,2.09e-07,1;UBERON:0002464,2.09e-07,1;UBERON:0004904,2.09e-07,1;UBERON:0001021,2.09e-07,1;UBERON:0003902,2.09e-07,1;UBERON:0005425,2.09e-07,1;UBERON:0002084,2.52e-07,1;UBERON:0002082,2.52e-07,1;UBERON:0010226,2.52e-07,1;UBERON:0005418,2.67e-07,1;UBERON:0001389,2.67e-07,1;UBERON:0000026,2.67e-07,1;UBERON:0008784,2.67e-07,1;UBERON:0006058,2.67e-07,1;UBERON:0003663,2.67e-07,1;UBERON:0004256,2.67e-07,1;UBERON:0004708,2.67e-07,1;UBERON:0002101,2.67e-07,1;UBERON:0004709,2.67e-07,1;UBERON:0002529,2.67e-07,1;UBERON:0010538,2.67e-07,1;UBERON:0003661,2.67e-07,1;UBERON:0010890,2.67e-07,1;UBERON:0002471,2.67e-07,1;UBERON:0001383,2.67e-07,1;UBERON:0004357,2.67e-07,1;UBERON:0004347,2.67e-07,1;UBERON:0005420,2.67e-07,1;UBERON:0005732,2.67e-07,1;UBERON:0010758,2.67e-07,1;UBERON:0010707,2.67e-07,1;UBERON:0000978,2.67e-07,1;UBERON:0002103,2.67e-07,1;UBERON:0001665,2.67e-07,1;UBERON:0003823,2.67e-07,1;UBERON:0000154,2.67e-07,1;UBERON:0010709,2.67e-07,1;UBERON:0005733,2.67e-07,1;UBERON:0005730,2.67e-07,1;UBERON:0001301,6.20e-07,1 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0.309632246632152,0,1.204823675113,0.739508020333575,0,0.142169232487422,0,0,0,0,0.223915474239924,0.647787332037959,0.257575567634187,0.145398238779565,0,0,0.464858073811369,0,0.309706370895104,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0,0,0,1.27867425159808,0,0.398927315243264,0,0.580418477257168,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0,0.209658645508376,0,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0.838998872419812,0.275118041940067,0,0,0,0.33472061276467,0,0.760272105718513,0.488124115096339,0,0.81014194788176,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.326923806226917,0,0.576175924479999,0,0.624320153660641,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,1.1240175325762,0.100528972411631,0.370353780634118,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,1.03664057770386,0.864719720501769,0.37872730027914,0.063497894292169,1.14596527667483,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0.197030760201927,0,0.128343036279748,0.508189248444927,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,1.20378439891088,4.5481500811197,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0.0821271560138091,0,0,0.362578348774867,0.40101294060657,0.644566922551274,0.114814448164607,0,0,0.451199612907412,0,0,1.46139224653261,0.316654886678627,0,0.340187410553031,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,1.95018073810956,0,1.06337790121334,0,0,0,0,0.145016693914229,0.170453254832202,0.356128142586949,0.495854746082934,0.192190067365106,0,0.50578890427775,0.929691098594572,0,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0.405820753925408,0,0,0,0.392996164052485,0,0,0.422215270595328,0.987884678879706,0,0,0.288666338176536,0.670302275535787,0,0,0,0,1.33029046061003,0,0,0,0,0,0,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0.284136146806413,0.71623345421307,0.593929361665277,0,0,0,0.333926115068718,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0.260427761085233,0,1.44999915086959,0.1137934482855,0.254253650292766,0,0,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0,0.230850775511391,0.113942055847001,0.23056390438806,0.359030577639089,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0.216388639742091,0,0.265372693510018,0,0.593042257361244,0.617819694732514,0.104421949505455,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0.063186579628488,0.751617097072463,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,1.04836000945218,0,0.0967563312890851,0,0,0.581934098930517,0.794305140223502,0.225980740780532,0.411125773940253,0,0,0.391102765469606,0,0,0.39961921916426,0.288180834308212,0,0,0.432164393964449,0.49701014226173,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0,0,0,0,0,0.0674035438541849,0.196854963029498,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0,0,0.394028536495991,0,0.633602019116439,0.717149357331379,0.383830394638891,1.42939065274673,1.32418394073086,0.25426853765475,0,0,0,0,0,0,0,0.1465522336780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| |||
|short_description=p14@CSDA | |||
}} |
Revision as of 12:09, 11 January 2014
Short description: | p14@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_CSDA_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000536107_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 2.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 2.23e-07 | 1 |
meningioma | 2.23e-07 | 1 |