FFCP PHASE1:Hg19::chr12:16506807..16506821,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7061 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-343bp_to_ENST00000538857_5end | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_11_at_MGST1_5end | |||
|id=chr12:16506807..16506821,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.21e-45!42;CL:0000860!2.16e-41!45;CL:0002194!8.13e-41!63;CL:0000576!8.13e-41!63;CL:0000040!8.13e-41!63;CL:0000559!8.13e-41!63;CL:0002009!3.35e-39!65;CL:0000766!1.07e-35!76;CL:0000839!1.44e-35!70;CL:0000557!6.66e-35!71;CL:0000763!9.17e-22!112;CL:0000049!9.17e-22!112;CL:0000136!2.24e-19!15;CL:0002087!3.07e-17!119;CL:0002031!4.30e-16!124;CL:0000738!7.56e-15!140;CL:0002032!9.10e-12!165;CL:0000837!9.10e-12!165;CL:0000037!7.80e-11!172;CL:0000566!7.80e-11!172;CL:0000988!1.22e-09!182;CL:0000134!4.90e-08!358;CL:0002615!1.07e-07!3;CL:0002320!1.37e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.85e-94;33!CL:0002057;1.85e-94;33!CL:0000473;6.20e-76;39!CL:0000234;6.20e-76;39!CL:0000576;7.23e-45;48!CL:0000136;3.02e-29;13!CL:0000766;8.73e-26;69!CL:0002615;2.94e-15;3!CL:0000763;1.30e-13;100!CL:0002087;4.91e-11;104!CL:0002617;2.18e-10;2!CL:0000738;3.67e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.24e-81,42;CL:0002057,5.24e-81,42;CL:0000473,1.12e-80,48;CL:0000234,1.12e-80,48;CL:0002194,2.60e-72,59;CL:0000576,2.60e-72,59;CL:0000040,2.60e-72,59;CL:0000559,2.60e-72,59;CL:0002009,9.34e-70,61;CL:0000839,4.90e-64,66;CL:0000557,5.42e-63,67;CL:0000766,3.32e-58,72;CL:0000763,1.86e-39,108;CL:0000049,1.86e-39,108;CL:0002087,4.69e-34,115;CL:0002031,2.32e-32,120;CL:0000738,9.12e-28,136;CL:0000136,4.45e-25,15;CL:0002032,3.20e-24,161;CL:0000837,3.20e-24,161;CL:0000037,6.37e-23,168;CL:0000988,2.11e-21,177;CL:0000134,1.32e-15,354;CL:0002615,3.40e-15,3;CL:0002320,3.79e-15,361;CL:0000219,1.57e-13,386;CL:0000048,1.50e-11,427;CL:0000723,2.81e-11,433;CL:0000034,6.35e-11,441;CL:0002617,2.29e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.23e-63;42!CL:0000049;2.26e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.15e-29!80;UBERON:0001474!8.66e-27!86;UBERON:0002405!2.37e-24!115;UBERON:0004765!1.91e-22!101;UBERON:0001434!1.91e-22!101;UBERON:0002390!5.48e-22!102;UBERON:0003061!5.48e-22!102;UBERON:0002193!3.48e-20!112;UBERON:0002204!1.97e-14!167;UBERON:0003688!4.25e-09!6;UBERON:0002358!4.25e-09!6;UBERON:0003684!4.25e-09!6;UBERON:0001178!4.25e-09!6;UBERON:0001869!7.19e-09!32;UBERON:0002020!3.01e-08!34;UBERON:0003528!3.01e-08!34;UBERON:0001893!3.61e-08!34;UBERON:0002619!1.54e-07!22;UBERON:0002384!1.64e-07!375;UBERON:0002791!2.64e-07!33;UBERON:0003080!4.37e-07!42;UBERON:0003081!6.22e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.50e-08;6!UBERON:0002358;7.50e-08;6!UBERON:0003684;7.50e-08;6!UBERON:0001178;7.50e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.02e-55,76;UBERON:0001474,2.33e-50,82;UBERON:0004765,2.54e-45,90;UBERON:0002405,1.18e-43,93;UBERON:0002390,4.25e-41,98;UBERON:0003061,4.25e-41,98;UBERON:0001434,3.80e-40,100;UBERON:0002193,1.09e-36,108;UBERON:0002204,2.35e-21,167;UBERON:0003081,2.34e-16,203;UBERON:0002384,1.22e-15,371;UBERON:0000926,1.03e-10,315;UBERON:0004120,1.03e-10,315;UBERON:0006603,1.03e-10,315;UBERON:0003688,8.05e-08,6;UBERON:0002358,8.05e-08,6;UBERON:0003684,8.05e-08,6;UBERON:0001178,8.05e-08,6 | |||
|phase1_expression=1.45342703416445,5.1384125733836,10.8534891153898,3.00219895059391,3.5756887554183,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,2.32637182047304,1.51150377475524,1.21292030593908,2.55671940596253,4.11167888021826,2.47765096716083,5.46615545412086,2.56160706529101,2.12834006899727,3.44745680736619,3.87290810150296,2.70852973188684,3.76484679085209,1.91034305040492,3.59557575112135,2.14258724659632,3.53021929783703,0,1.31940520074686,1.99463657621632,0.426224750532694,4.35313857942876,3.40431134814684,1.86846674698672,4.01997864410789,4.69334626578181,3.47502151528187,3.02699751316684,4.05105399586321,6.0127853613768,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29818957461873,2.08955684759121,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.63802985597466,1.0404181360211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0.561320188866147,0.896974044789907,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87010689511529,0,0.223676107892416,0,0,0,0,0,0,0,0,6.00683535014765,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,12.5124094774979,34.5952053751326,51.772402473025,15.082141012651,0,0,0.244052529803926,0.250381861413,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@MGST1 | |||
}} |
Revision as of 12:29, 11 January 2014
Short description: | p11@MGST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_MGST1_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | -343bp_to_ENST00000538857_5end |
EntrezGene: | MGST1 |
HGNC: | 7061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.24e-81 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.24e-81 | 42 |
defensive cell | 1.12e-80 | 48 |
phagocyte | 1.12e-80 | 48 |
monopoietic cell | 2.60e-72 | 59 |
monocyte | 2.60e-72 | 59 |
monoblast | 2.60e-72 | 59 |
promonocyte | 2.60e-72 | 59 |
macrophage dendritic cell progenitor | 9.34e-70 | 61 |
myeloid lineage restricted progenitor cell | 4.90e-64 | 66 |
granulocyte monocyte progenitor cell | 5.42e-63 | 67 |
myeloid leukocyte | 3.32e-58 | 72 |
myeloid cell | 1.86e-39 | 108 |
common myeloid progenitor | 1.86e-39 | 108 |
nongranular leukocyte | 4.69e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 2.32e-32 | 120 |
leukocyte | 9.12e-28 | 136 |
fat cell | 4.45e-25 | 15 |
hematopoietic oligopotent progenitor cell | 3.20e-24 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-24 | 161 |
hematopoietic stem cell | 6.37e-23 | 168 |
hematopoietic cell | 2.11e-21 | 177 |
mesenchymal cell | 1.32e-15 | 354 |
adipocyte of omentum tissue | 3.40e-15 | 3 |
connective tissue cell | 3.79e-15 | 361 |
motile cell | 1.57e-13 | 386 |
multi fate stem cell | 1.50e-11 | 427 |
somatic stem cell | 2.81e-11 | 433 |
stem cell | 6.35e-11 | 441 |
adipocyte of breast | 2.29e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.02e-55 | 76 |
bone element | 2.33e-50 | 82 |
skeletal element | 2.54e-45 | 90 |
immune system | 1.18e-43 | 93 |
hematopoietic system | 4.25e-41 | 98 |
blood island | 4.25e-41 | 98 |
skeletal system | 3.80e-40 | 100 |
hemolymphoid system | 1.09e-36 | 108 |
musculoskeletal system | 2.35e-21 | 167 |
lateral plate mesoderm | 2.34e-16 | 203 |
connective tissue | 1.22e-15 | 371 |
mesoderm | 1.03e-10 | 315 |
mesoderm-derived structure | 1.03e-10 | 315 |
presumptive mesoderm | 1.03e-10 | 315 |
omentum | 8.05e-08 | 6 |
peritoneum | 8.05e-08 | 6 |
abdominal cavity | 8.05e-08 | 6 |
visceral peritoneum | 8.05e-08 | 6 |