FFCP PHASE1:Hg19::chr12:25205155..25205214,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4033 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6690 | |||
|TSSclassifier=strong | |||
|UniProt=F8W9L6,F8VRE4,Q12912 | |||
|association_with_transcript=0bp_to_ENST00000361433,ENST00000550945,ENST00000555141,NM_001204126,NM_001204127,NM_006152_5end | |||
|coexpression_cluster_id=C3269 | |||
|description=CAGE_peak_3_at_LRMP_5end | |||
|id=chr12:25205155..25205214,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-70!172;CL:0000566!1.45e-70!172;CL:0000988!1.24e-67!182;CL:0002032!6.45e-65!165;CL:0000837!6.45e-65!165;CL:0000738!9.88e-65!140;CL:0002031!1.84e-52!124;CL:0002087!2.50e-51!119;CL:0000542!1.14e-35!53;CL:0000051!1.14e-35!53;CL:0000838!5.16e-35!52;CL:0000763!1.29e-28!112;CL:0000049!1.29e-28!112;CL:0000766!9.89e-23!76;CL:0000084!1.54e-19!25;CL:0000827!1.54e-19!25;CL:0000839!1.22e-18!70;CL:0002057!2.22e-17!42;CL:0000557!3.12e-17!71;CL:0000791!2.01e-15!18;CL:0000789!2.01e-15!18;CL:0002420!2.01e-15!18;CL:0002419!2.01e-15!18;CL:0000790!2.01e-15!18;CL:0002009!2.95e-15!65;CL:0000860!3.07e-15!45;CL:0002194!3.15e-15!63;CL:0000576!3.15e-15!63;CL:0000040!3.15e-15!63;CL:0000559!3.15e-15!63;CL:0000945!5.45e-14!24;CL:0000826!5.45e-14!24;CL:0000625!3.35e-10!11;CL:0000134!1.40e-09!358;CL:0002320!1.18e-08!365;CL:0000094!3.97e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.75e-26;25!CL:0000542;1.01e-25;53!CL:0000791;1.43e-21;18!CL:0000789;1.43e-21;18!CL:0002419;1.43e-21;18!CL:0000945;5.97e-17;24!CL:0002087;2.49e-16;104!CL:0000625;5.50e-14;11!CL:0000738;3.43e-13;136!CL:0000988;1.44e-11;177!CL:0000094;1.62e-09;8!CL:0000624;3.97e-08;6!CL:0000081;6.05e-08;11!CL:0000766;1.42e-07;69!CL:0000860;4.13e-07;33!CL:0002057;4.13e-07;33!CL:0000576;6.97e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.29e-69,168;CL:0000738,1.47e-65,136;CL:0000988,2.08e-65,177;CL:0002032,3.37e-62,161;CL:0000837,3.37e-62,161;CL:0002031,8.69e-51,120;CL:0002087,7.27e-49,115;CL:0000542,1.30e-46,53;CL:0000051,1.30e-46,53;CL:0000838,1.14e-45,52;CL:0000084,5.68e-26,25;CL:0000827,5.68e-26,25;CL:0000791,1.48e-21,18;CL:0000789,1.48e-21,18;CL:0002420,1.48e-21,18;CL:0002419,1.48e-21,18;CL:0000790,1.48e-21,18;CL:0000763,1.41e-20,108;CL:0000049,1.41e-20,108;CL:0000945,4.60e-17,24;CL:0000826,4.60e-17,24;CL:0000766,4.66e-16,72;CL:0000134,1.42e-14,354;CL:0000625,5.10e-14,11;CL:0002320,1.08e-13,361;CL:0000839,1.40e-11,66;CL:0000219,1.14e-10,386;CL:0000557,1.42e-10,67;CL:0000860,6.80e-10,42;CL:0002057,6.80e-10,42;CL:0000094,1.35e-09,8;CL:0002009,2.89e-08,61;CL:0000624,4.45e-08,6;CL:0000081,4.57e-08,11;CL:0002194,5.41e-08,59;CL:0000576,5.41e-08,59;CL:0000040,5.41e-08,59;CL:0000559,5.41e-08,59;CL:0000473,8.17e-08,48;CL:0000234,8.17e-08,48;CL:0000048,3.40e-07,427;CL:0000034,3.80e-07,441;CL:0000236,6.95e-07,14;CL:0000723,9.66e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;1.01e-25;53!CL:0000790;1.43e-21;18!CL:0002057;3.52e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!3.86e-15!51;DOID:0060083!3.86e-15!51;DOID:1240!2.52e-10!39;DOID:0060058!1.81e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;5.73e-10;10!DOID:2531;3.19e-09;51!DOID:0060083;3.19e-09;51!DOID:1240;2.64e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.99e-15,51;DOID:0060083,2.99e-15,51;DOID:0060058,4.62e-10,10;DOID:1240,2.18e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.42e-27!102;UBERON:0003061!2.42e-27!102;UBERON:0002193!6.83e-25!112;UBERON:0007023!2.99e-18!115;UBERON:0002371!8.07e-15!80;UBERON:0001474!1.82e-12!86;UBERON:0002405!1.51e-11!115;UBERON:0000178!5.85e-11!15;UBERON:0000179!5.85e-11!15;UBERON:0000463!5.85e-11!15;UBERON:0004765!5.69e-09!101;UBERON:0001434!5.69e-09!101;UBERON:0002384!5.74e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.88e-12;15!UBERON:0000179;2.88e-12;15!UBERON:0000463;2.88e-12;15!UBERON:0002390;1.05e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.38e-22,98;UBERON:0003061,1.38e-22,98;UBERON:0002193,8.54e-21,108;UBERON:0002405,1.24e-12,93;UBERON:0002384,1.66e-12,371;UBERON:0000178,2.49e-12,15;UBERON:0000179,2.49e-12,15;UBERON:0000463,2.49e-12,15;UBERON:0002371,1.32e-09,76;UBERON:0004177,1.43e-08,7;UBERON:0005057,1.43e-08,7;UBERON:0001474,3.28e-08,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1863905680124,20.9356503097362,24.8726068951226,2.75354993794233,19.9591287010551,6.34746105595912,0,0,0,48.029664359787,20.4723694781887,2.34880351467878,8.30993112797816,8.82395568868623,6.51032612147556,0.223915474239924,1.29557466407592,1.03030227053675,0.872389432677388,2.26725566213286,0.727752183563449,1.85943229524548,0.411167888021826,2.16794459626573,0.28769239232215,0.512321413058201,1.6553756092201,1.37898272294647,3.22742341791913,1.35426486594342,0.941211697713023,1.91034305040492,2.24723484445085,1.22433556948361,1.28371610830437,3.19668562899521,0.329851300186716,0.598390972864896,1.27867425159808,2.03146467040009,1.70215567407342,0.622822248995575,1.25624332628372,3.12889751052121,0.868755378820466,2.42159801053347,0.736555271975129,2.53169909952708,1.05627643155971,1.06302149982522,0.838634582033504,0.898629049171961,1.05123824989054,2.08943262706204,0.570025487482497,0.19891667719909,1.0959849225878,1.75996244461323,0.546138611262131,1.77901850772711,1.70692089026603,2.40237592221607,2.29900975981793,0.661044872784862,0,1.70763890732835,1.17447437874188,1.52909291250092,2.64342657158052,5.60508562981536,1.05353633910031,18.0972988504726,13.3623659334716,9.25206745497792,0,11.0813570655421,11.8361951433683,11.6896037044747,8.69001563704354,5.59751224202191,4.65221178625604,6.49929273036037,3.5865569523189,4.03183977435623,12.0039670360684,14.64655094265,22.025034515864,20.4635457163643,23.276052043805,20.9071047609954,14.5035958652885,6.13152789763074,10.3088233644789,23.0247919737748,9.875527844047,9.11516835398986,9.50452044448374,8.88393202558859,9.7269824477358,11.2437653897111,13.0227488624209,9.85353596305256,16.1285394579786,21.9300960542476,18.9719969086467,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0.324547393654683,0.696518949197069,0.398873881556595,5.48528435902286,1.71598473234038,6.68623502393217,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,66.6609280116122,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0,0,0,4.92663237895944,2.3773077183571,5.59785911960085,2.88239906833923,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.30306695146276,20.0971375405966,22.2096402105303,22.5883743852357,0,0,0.773288812777695,0.167516265334349,0.637938751653163,5.99205619157746,11.966458368161,12.4324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9925455151275,5.39285502046542,10.6727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,1.53481913652154,2.3529190592241,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.564862804660675,0,0,0,0,7.61171413848254,10.7049208999933,7.40541343326411,4.76463550915578,8.22724546172388,9.07862635669804,9.18053443304795,7.13812658664843,0,0,0,4.64507937814297,5.4822300931049,57.4114675821702,3.66680427276291,1.1974762285969,0.191505370132367,4.65681881992542,0.324621940274555,0,1.59764275323235,0.47003968731907,2.50634477090067,0.338583555603207,4.33587802779989,1.81619736471943,2.12923118845163,2.74804275804612,1.22896305723383,1.11838053946208,0.667396566847634,0.390776190804081,0,3.69262196843137,1.35227839237992,4.9960795199673,2.81974010175699,0,0.439524537815682,0,1.89453753271713,0,0,0.296964680832639,0,6.95903353436409,6.33012373847307,0.111308705022906,0.494411622680279,0,1.19548792950642,5.52567831062295,0,0,3.81562896929315,0,0.269605053441981,0,1.02314474045374,3.94573622547734,11.974154617347,0,1.93866549219044,1.20598527610407,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.658156191461918,0,0,0.615602068030377,0,0,0,0,0.957003479195758,0,0.533034776018635,10.2193298195736,0.784901281975124,0,0,0,0.167821586975843,0,1.11255605286265,0,0,0,0,0,0.707660516026713,0,2.96521128680622,0.741383633679017,0.313265848516366,0.134802265961354,0,0,3.46664099509765,0.978323094660449,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.484945082442097,0,0,0,0,1.07628353124994,0,0,0.640358984218058,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,2.36598618851383,0.558564802544508,0.687481272035051,1.43574604915363,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,11.1768798326836,7.15706720828373,1.49823746722733,0,0,0,4.72445172258151,0,0.607495566580247,0,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0.517131825446202,0.13223260174269,0,0,2.0289608387862,1.10043013569766,0.41423905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| |||
|short_description=p3@LRMP | |||
}} |
Revision as of 12:42, 11 January 2014
Short description: | p3@LRMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRMP_5end |
Coexpression cluster: | C3269_Hodgkin_thymus_acute_Burkitt_mycosis_non_B |
Association with transcript: | 0bp_to_ENST00000361433, ENST00000550945, ENST00000555141, NM_001204126, NM_001204127, NM_006152_5end |
EntrezGene: | LRMP |
HGNC: | 6690 |
UniProt: | F8W9L6F8VRE4Q12912 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.38e-22 | 98 |
blood island | 1.38e-22 | 98 |
hemolymphoid system | 8.54e-21 | 108 |
immune system | 1.24e-12 | 93 |
connective tissue | 1.66e-12 | 371 |
blood | 2.49e-12 | 15 |
haemolymphatic fluid | 2.49e-12 | 15 |
organism substance | 2.49e-12 | 15 |
bone marrow | 1.32e-09 | 76 |
hemopoietic organ | 1.43e-08 | 7 |
immune organ | 1.43e-08 | 7 |
bone element | 3.28e-08 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.99e-15 | 51 |
immune system cancer | 2.99e-15 | 51 |
lymphoma | 4.62e-10 | 10 |
leukemia | 2.18e-09 | 39 |