FFCP PHASE1:Hg19::chr14:54317532..54317552,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000418927_5end | |||
|coexpression_cluster_id=C3432 | |||
|description=CAGE_peak_1_at_ENST00000418927_5end | |||
|id=chr14:54317532..54317552,- | |||
|ontology_enrichment_celltype=CL:0000077!7.94e-23!19;CL:0000066!6.30e-22!254;CL:0000213!1.13e-12!57;CL:0000215!1.13e-12!57;CL:0000076!4.02e-11!62;CL:0000223!1.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.30e-26;19!CL:0002097;9.41e-15;2!CL:0000174;3.91e-10;3!CL:0002563;1.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.45e-26,19;CL:0002097,9.74e-15,2;CL:0000066,1.47e-14,253;CL:0000174,4.00e-10,3;CL:0000213,1.32e-09,58;CL:0000215,1.32e-09,58;CL:0002563,1.10e-07,4;CL:0000076,4.75e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.06e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.27e-19!106;DOID:0050687!6.11e-18!143;DOID:162!1.85e-15!235;DOID:14566!8.76e-15!239 | |||
|ontology_enrichment_disease_v019=DOID:299;1.37e-12;25!DOID:170;9.33e-11;6!DOID:3111;2.52e-08;1!DOID:3603;2.52e-08;1!DOID:3112;1.06e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.62e-15,106;DOID:299,1.31e-12,25;DOID:0050687,8.99e-12,143;DOID:170,9.33e-11,6;DOID:162,9.71e-11,235;DOID:14566,2.01e-10,239;DOID:3111,2.52e-08,1;DOID:3603,2.52e-08,1;DOID:3112,9.29e-08,1;DOID:7,1.20e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005911!4.88e-16!82;UBERON:0003929!3.03e-14!54;UBERON:0002294!5.11e-13!7;UBERON:0001173!5.11e-13!7;UBERON:0004912!5.11e-13!7;UBERON:0004119!9.61e-13!169;UBERON:0000925!9.61e-13!169;UBERON:0006595!9.61e-13!169;UBERON:0000077!5.44e-12!130;UBERON:0001007!2.58e-11!155;UBERON:0001555!2.58e-11!155;UBERON:0007026!2.58e-11!155;UBERON:0009497!2.73e-11!25;UBERON:0000015!2.73e-11!25;UBERON:0002423!2.73e-11!25;UBERON:0006235!2.73e-11!25;UBERON:0004161!2.73e-11!25;UBERON:0004921!1.46e-10!129;UBERON:0004185!1.46e-10!129;UBERON:0007499!1.58e-09!25;UBERON:0009856!4.88e-09!26;UBERON:0002394!3.39e-08!4;UBERON:0003928!3.39e-08!4;UBERON:0000466!5.18e-08!126;UBERON:0008835!7.68e-08!22;UBERON:0003894!7.68e-08!22;UBERON:0009854!2.16e-07!23;UBERON:0005177!3.03e-07!107;UBERON:0005172!3.58e-07!55;UBERON:0005173!3.58e-07!55;UBERON:0001041!4.45e-07!98;UBERON:0002530!5.84e-07!59;UBERON:0001048!5.94e-07!168;UBERON:0000060!8.08e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;3.91e-10;3!UBERON:0001235;3.91e-10;3!UBERON:0006858;3.91e-10;3!UBERON:0002294;1.84e-09;7!UBERON:0001173;1.84e-09;7!UBERON:0002394;6.64e-08;4!UBERON:0003928;6.64e-08;4!UBERON:0001052;7.74e-08;4!UBERON:0001831;1.06e-07;1!UBERON:0001567;1.06e-07;1!UBERON:0001242;1.10e-07;4!UBERON:0001262;1.10e-07;4!UBERON:0004786;1.10e-07;4!UBERON:0004808;1.10e-07;4!UBERON:0001277;1.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,4.00e-10,3;UBERON:0001235,4.00e-10,3;UBERON:0006858,4.00e-10,3;UBERON:0001052,7.87e-08,4;UBERON:0001242,1.10e-07,4;UBERON:0001262,1.10e-07,4;UBERON:0004786,1.10e-07,4;UBERON:0004808,1.10e-07,4;UBERON:0001277,1.10e-07,4;UBERON:0001831,1.21e-07,1;UBERON:0001567,1.21e-07,1;UBERON:0008801,1.21e-07,1;UBERON:0002294,1.91e-07,9;UBERON:0001173,1.91e-07,9;UBERON:0004912,1.91e-07,9;UBERON:0003929,7.49e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0.66944122552934,0.402829317109147,0,0.976248230192678,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0.379891534993739,0.264818361626438,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,6.64137568132813,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,1.44366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,2.1100756394171,0.871533458600294,2.0994328148232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0,0,0,0,0,0,0,0,0,5.31781578203138,0.40101294060657,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88743956579008,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,15.3674880461929,9.30910108313168,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.69169171316418,0.0897576444097721,0.651884231532048,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,15.8335823914373,6.50224128596128,0,0,0,0,0,0,0,0,0,0,0,3.7176277597097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783532859223623,0.34945333648406,0,0,0.0730893170861856,0,0,0,0,0,0,0,0.195551382734803,7.69524674414724,0.85381197895741,0,0,0.687219576995494,0,0.288109595976299,0,0,0.815425236441684,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.606631894687664,4.4292366681637,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,7.86999454267915,5.63852017853338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.624902039810533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.537052785212442,0,0,0,0,0,0,7.51217338588483,9.86431320324658,2.87093721161733,8.61482516946635,0.231522474323834,0.244736704506468,0.358177682162975,0.617602894321944,2.85069264452319,0,0.192914038270915,1.35153952522458,0.256241518587947,1.38172136692479,0,0,0,0,0,0,0,12.6787274015176,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,1.47394725759087,0.295712172434091,0,0,0,0,0,1.09651553371436,0,0,31.0462699164217,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0.111231401892069,0.078493092850514,0,16.8163297988273,0,3.23891386827932,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,21.9942593802288,0,0,0,19.6300467230486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0.275684698604535,0,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0,0.217716747896961,0,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000418927 | |||
}} |
Revision as of 20:10, 11 January 2014
Short description: | p1@ENST00000418927 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418927_5end |
Coexpression cluster: | C3432_pharyngeal_signet_serous_bile_rectal_clear_mucinous |
Association with transcript: | 47bp_to_ENST00000418927_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.45e-26 | 19 |
cortical cell of adrenal gland | 9.74e-15 | 2 |
epithelial cell | 1.47e-14 | 253 |
steroid hormone secreting cell | 4.00e-10 | 3 |
lining cell | 1.32e-09 | 58 |
barrier cell | 1.32e-09 | 58 |
intestinal epithelial cell | 1.10e-07 | 4 |
squamous epithelial cell | 4.75e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 4.00e-10 | 3 |
adrenal cortex | 4.00e-10 | 3 |
adrenal/interrenal gland | 4.00e-10 | 3 |
rectum | 7.87e-08 | 4 |
intestinal mucosa | 1.10e-07 | 4 |
wall of intestine | 1.10e-07 | 4 |
gastrointestinal system mucosa | 1.10e-07 | 4 |
gastrointestinal system epithelium | 1.10e-07 | 4 |
intestinal epithelium | 1.10e-07 | 4 |
parotid gland | 1.21e-07 | 1 |
cheek | 1.21e-07 | 1 |
parotid gland primordium | 1.21e-07 | 1 |
biliary system | 1.91e-07 | 9 |
biliary tree | 1.91e-07 | 9 |
biliary bud | 1.91e-07 | 9 |
gut epithelium | 7.49e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.62e-15 | 106 |
adenocarcinoma | 1.31e-12 | 25 |
cell type cancer | 8.99e-12 | 143 |
endocrine gland cancer | 9.33e-11 | 6 |
cancer | 9.71e-11 | 235 |
disease of cellular proliferation | 2.01e-10 | 239 |
cystadenocarcinoma | 2.52e-08 | 1 |
mucinous cystadenocarcinoma | 2.52e-08 | 1 |
papillary adenocarcinoma | 9.29e-08 | 1 |
disease of anatomical entity | 1.20e-07 | 39 |