FFCP PHASE1:Hg19::chr17:46022728..46022773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C314 | |||
|description=CAGE_peak_at_chr17:46022728..46022773,+ | |||
|id=chr17:46022728..46022773,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.18e-21!63;CL:0000576!3.18e-21!63;CL:0000040!3.18e-21!63;CL:0000559!3.18e-21!63;CL:0000839!3.56e-20!70;CL:0002009!4.72e-20!65;CL:0000557!1.21e-19!71;CL:0000766!5.74e-18!76;CL:0000763!1.59e-13!112;CL:0000049!1.59e-13!112;CL:0002087!7.57e-13!119;CL:0002031!9.61e-13!124;CL:0002057!1.72e-12!42;CL:0000860!1.07e-11!45;CL:0000738!3.20e-11!140;CL:0000037!5.73e-11!172;CL:0000566!5.73e-11!172;CL:0002032!2.60e-10!165;CL:0000837!2.60e-10!165;CL:0000988!3.30e-10!182 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.47e-20;6!CL:0002619;1.37e-10;3!CL:0000473;3.03e-08;39!CL:0000234;3.03e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.52e-20,6;CL:0002194,5.19e-20,59;CL:0000576,5.19e-20,59;CL:0000040,5.19e-20,59;CL:0000559,5.19e-20,59;CL:0002009,3.56e-19,61;CL:0000839,2.64e-17,66;CL:0000557,5.78e-17,67;CL:0000766,2.10e-15,72;CL:0000763,4.25e-14,108;CL:0000049,4.25e-14,108;CL:0002087,1.18e-11,115;CL:0002031,6.64e-11,120;CL:0000037,8.66e-11,168;CL:0002032,1.14e-10,161;CL:0000837,1.14e-10,161;CL:0002619,1.26e-10,3;CL:0000988,7.51e-10,177;CL:0000738,8.67e-10,136;CL:0000473,1.23e-09,48;CL:0000234,1.23e-09,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.13e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.91e-18!80;UBERON:0002390!2.52e-17!102;UBERON:0003061!2.52e-17!102;UBERON:0001474!9.39e-16!86;UBERON:0002193!9.40e-15!112;UBERON:0004765!2.08e-14!101;UBERON:0001434!2.08e-14!101;UBERON:0007023!2.08e-14!115;UBERON:0001049!7.73e-13!57;UBERON:0005068!7.73e-13!57;UBERON:0006241!7.73e-13!57;UBERON:0007135!7.73e-13!57;UBERON:0002405!1.54e-12!115;UBERON:0002204!1.83e-11!167;UBERON:0001017!6.15e-10!82;UBERON:0002780!6.96e-10!41;UBERON:0001890!6.96e-10!41;UBERON:0006240!6.96e-10!41;UBERON:0005743!1.45e-09!86;UBERON:0003080!1.89e-09!42;UBERON:0002616!3.33e-09!59;UBERON:0001893!3.70e-09!34;UBERON:0002020!7.09e-09!34;UBERON:0003528!7.09e-09!34;UBERON:0000955!1.11e-08!69;UBERON:0006238!1.11e-08!69;UBERON:0002791!1.54e-08!33;UBERON:0003075!1.62e-08!86;UBERON:0007284!1.62e-08!86;UBERON:0001869!7.36e-08!32;UBERON:0002346!1.32e-07!90;UBERON:0000073!1.75e-07!94;UBERON:0001016!1.75e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;7.98e-07;2!UBERON:0010225;7.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.86e-16,76;UBERON:0001474,2.98e-14,82;UBERON:0002405,3.56e-13,93;UBERON:0004765,1.76e-12,90;UBERON:0002390,3.36e-12,98;UBERON:0003061,3.36e-12,98;UBERON:0001434,1.13e-10,100;UBERON:0002193,1.57e-10,108;UBERON:0001897,6.50e-07,2;UBERON:0010225,6.50e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.572471974262113,0.547497700291537,0.125542639594803,0,0.164201178899891,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,1.10799081706375,0,0.217010870715852,4.25439401055856,2.59114932815184,3.8636335145128,1.59938062657521,2.26725566213286,2.91100873425379,0.232429036905685,0.822335776043652,0.309706370895104,0,0.768482119587302,1.18241114944293,0,0,0,0.564727018627814,1.09162460023138,1.12361742222542,0.612167784741805,1.28371610830437,0.639337125799041,0.659702600373432,0.398927315243264,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0.633765858935825,0.212604299965044,0.628975936525128,0.673971786878971,0.901061357049038,0.803627933485401,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0,0,0.668745981562712,0,0,0,0.111410456885174,0,0,0,0.384273959177026,0.520237390239513,1.80881695064044,0.829050053357545,0.869409257205157,1.18629250529648,1.60524496853828,1.04535523804977,0.339928028092699,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0,1.20460095262218,0.639933055772092,1.24930726552346,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,10.0609692032952,8.35822739036483,10.6366368415092,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.340296549480063,0,0,0.423863802319124,0,0,0,0,0.168776332241266,0.487185025805993,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,1.32438929824395,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,8.12516120088411,21.9964009230883,13.2281734436968,0,0.503946384596579,0.425325291727159,0,0,0,0,0,0.621984346622316,0.288239906833923,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42590878707255,9.58686804460323,4.79870357673874,15.8110914833548,17.5789982001244,12.6500363689819,0,0,0,0.144781306667579,0.61642896765115,0.895304816199478,0,0.394061520403854,0,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,1.02341449813341,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0.616067160352178,2.12922412126809,0.869932992075073,0.18532421910392,1.71749864090389,0,0,0,0.511795582622668,0,0,0,0,0,0,0.808729926293264,0,0.842516912477962,0,0,0,0,0,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.714695326373367,0.822724546172388,0,0,0,0,0,0,0,0,0.497992903438899,1.91311527274587,0,1.53204296105893,2.11673582723883,0.324621940274555,0.280797178113459,1.14117339516596,0,0,0.338583555603207,0,0.403599414382095,0,0,0.307240764308458,1.3420566473545,1.16794399198336,2.34465714482448,0,0,0,1.99843180798692,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.19924798825107,0,0,0.511343412510774,0,0,0,0,0,0.295930216910801,0,0,0.969332746095218,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.442317039724898,0.295547618953547,0.219385397153973,0,0,0.153900517007594,1.02547850262301,0,0.0897576444097721,0,0,0,0.533034776018635,3.06579894587209,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.617819694732514,0.626531697032732,2.02203398942031,0,0.468528891450678,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0.0821154570532092,0.193978032976839,0,0,0,0,0.759729551470544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,1.03274246318642,0,0.236417121897595,0,0,0,0,0.714695326373367,0,0,0,3.45688596480507,6.53174720218818,0,0,1.02232813071253,0,0.146552233678082,0,0.517131825446202,0.79339561045614,0,0,0.427149650270779,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0,1.33114861844223,1.61450647647597,0,0,0.151649117541648,0,0,0,0,0,0,0.554805861502613,0.378806010550178,1.50940741051545,0,0,0,0,0.295710299979268,0.318593534327405,1.79921244865442,0.310525913752519,0.829412415681711,0.53168342911599,1.04349012362347,1.50257608997218,3.80805212168795,0.406870733204662,0.181848659202559,0.859284456339908,0,0.398095888698616,0,1.03018711554838,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,1.11743701340006,0.41023272848151,0,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,1.01306376927592,0,0.826747186004736,0.31707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| |||
|short_description=p@chr17:46022728..46022773,+ | |||
}} |
Revision as of 15:57, 20 January 2014
Short description: | p@chr17:46022728..46022773, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46022728..46022773, + |
Coexpression cluster: | C314_Macrophage_Dendritic_Monocytederived_CD14_Esophageal_Mast_Keratinocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.52e-20 | 6 |
monopoietic cell | 5.19e-20 | 59 |
monocyte | 5.19e-20 | 59 |
monoblast | 5.19e-20 | 59 |
promonocyte | 5.19e-20 | 59 |
macrophage dendritic cell progenitor | 3.56e-19 | 61 |
myeloid lineage restricted progenitor cell | 2.64e-17 | 66 |
granulocyte monocyte progenitor cell | 5.78e-17 | 67 |
myeloid leukocyte | 2.10e-15 | 72 |
myeloid cell | 4.25e-14 | 108 |
common myeloid progenitor | 4.25e-14 | 108 |
nongranular leukocyte | 1.18e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 6.64e-11 | 120 |
hematopoietic stem cell | 8.66e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.14e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-10 | 161 |
adult endothelial progenitor cell | 1.26e-10 | 3 |
hematopoietic cell | 7.51e-10 | 177 |
leukocyte | 8.67e-10 | 136 |
defensive cell | 1.23e-09 | 48 |
phagocyte | 1.23e-09 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.86e-16 | 76 |
bone element | 2.98e-14 | 82 |
immune system | 3.56e-13 | 93 |
skeletal element | 1.76e-12 | 90 |
hematopoietic system | 3.36e-12 | 98 |
blood island | 3.36e-12 | 98 |
skeletal system | 1.13e-10 | 100 |
hemolymphoid system | 1.57e-10 | 108 |
dorsal plus ventral thalamus | 6.50e-07 | 2 |
thalamic complex | 6.50e-07 | 2 |