FFCP PHASE1:Hg19::chr18:3449527..3449582,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000551557_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_6_at_TGIF1_5end | |||
|id=chr18:3449527..3449582,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.80e-31!76;CL:0000557!2.26e-30!71;CL:0000738!1.29e-29!140;CL:0002009!1.59e-28!65;CL:0000763!2.46e-28!112;CL:0000049!2.46e-28!112;CL:0000037!2.93e-28!172;CL:0000566!2.93e-28!172;CL:0002194!4.69e-28!63;CL:0000576!4.69e-28!63;CL:0000040!4.69e-28!63;CL:0000559!4.69e-28!63;CL:0000839!1.25e-27!70;CL:0002032!1.86e-27!165;CL:0000837!1.86e-27!165;CL:0002057!8.82e-27!42;CL:0000988!2.05e-26!182;CL:0000860!1.52e-25!45;CL:0000134!3.73e-25!358;CL:0002087!5.42e-25!119;CL:0002031!1.87e-24!124;CL:0002320!3.40e-24!365;CL:0000219!6.93e-22!390;CL:0000048!9.95e-22!430;CL:0000034!1.31e-21!444;CL:0000723!8.85e-21!436;CL:0000012!9.32e-12!682;CL:0000063!2.25e-11!578;CL:0000144!1.08e-10!625;CL:0000548!1.25e-10!679;CL:0000004!1.25e-10!679;CL:0000255!1.25e-10!679;CL:0000003!5.30e-10!722;CL:0002371!2.13e-09!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.93e-25;33!CL:0002057;7.93e-25;33!CL:0000473;1.61e-22;39!CL:0000234;1.61e-22;39!CL:0000576;3.42e-22;48!CL:0000766;2.62e-17;69!CL:0000763;5.02e-11;100!CL:0002087;9.20e-10;104!CL:0000738;2.37e-08;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.31e-38,72;CL:0000738,3.58e-38,136;CL:0000557,8.12e-37,67;CL:0000037,9.63e-37,168;CL:0002032,1.98e-35,161;CL:0000837,1.98e-35,161;CL:0000988,4.73e-35,177;CL:0000763,5.87e-35,108;CL:0000049,5.87e-35,108;CL:0002009,9.12e-35,61;CL:0002194,3.14e-34,59;CL:0000576,3.14e-34,59;CL:0000040,3.14e-34,59;CL:0000559,3.14e-34,59;CL:0000839,1.78e-33,66;CL:0000473,3.49e-33,48;CL:0000234,3.49e-33,48;CL:0002087,6.78e-32,115;CL:0000134,9.23e-32,354;CL:0000860,9.45e-32,42;CL:0002057,9.45e-32,42;CL:0002031,4.16e-31,120;CL:0002320,6.10e-30,361;CL:0000219,1.60e-27,386;CL:0000048,7.03e-27,427;CL:0000034,7.34e-26,441;CL:0000723,1.14e-25,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.72e-23;42!CL:0000049;1.19e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.70e-28!102;UBERON:0003061!1.70e-28!102;UBERON:0002371!1.71e-27!80;UBERON:0002193!2.16e-25!112;UBERON:0001474!7.01e-25!86;UBERON:0002384!5.72e-24!375;UBERON:0004765!2.32e-20!101;UBERON:0001434!2.32e-20!101;UBERON:0002405!2.18e-18!115;UBERON:0002204!6.02e-14!167;UBERON:0003081!2.09e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.81e-34,76;UBERON:0002390,1.38e-33,98;UBERON:0003061,1.38e-33,98;UBERON:0001474,2.99e-31,82;UBERON:0002193,1.18e-30,108;UBERON:0002384,6.96e-30,371;UBERON:0002405,3.86e-29,93;UBERON:0004765,5.22e-26,90;UBERON:0001434,7.94e-24,100;UBERON:0002204,5.14e-15,167;UBERON:0003081,2.97e-13,203;UBERON:0000926,2.69e-09,315;UBERON:0004120,2.69e-09,315;UBERON:0006603,2.69e-09,315 | |||
|phase1_expression=2.72517568905835,2.14100523890983,1.26858963686374,1.0007329835313,3.12872766099101,1.74467704820074,0,1.89515962028049,2.35067065379855,0.982935746006035,3.48900583986214,1.09220686065086,0.527533956456907,0.990130823680373,0.331397375727916,0.672325146451775,1.80808358407193,1.46062018077475,0.487932798790507,0.492484232307152,0.612002073732759,0.626909442956176,0,0,0.627713197974014,0,0,0.0787107813136792,13.7677496897116,7.67658796194425,11.6112092487057,0,0.30120591877825,0.739508020333575,0.154934401160603,0.284338464974843,3.81680571135301,16.0658668474244,12.0326668482085,8.46342395791822,3.58264758783879,6.15397965436061,2.83333124397605,11.0502661472469,12.8477820854195,11.886618998203,20.2213262107946,18.913722849004,17.962969511916,20.7138522471948,19.9805351092698,16.7902383220896,35.5088051158717,34.2106882299428,32.502356782642,21.4596267078569,15.0098382531815,12.5845151289247,28.4658019904939,14.4418062184242,19.1801137739712,8.57613380485462,13.9624560335142,10.6556187633174,29.6013423401156,25.5323351111013,19.9303119678584,24.3711205299041,27.1171117578505,21.7188844705117,20.5835830895345,17.6773265274031,19.304205633894,4.85887158517466,5.52771179909113,5.66078342872615,8.19999007369414,8.10955221344134,5.30394436100364,4.27519115611873,1.39241674039363,2.19196984517561,0,2.18455444504853,1.77901850772711,2.56038133539904,2.40237592221607,0.574752439954483,3.96626923670917,1.90810750907073,2.84606484554724,4.11066032559657,3.44045905312706,5.28685314316103,8.40762844472304,3.423993102076,0.393419540227666,1.96505381374582,1.23360899399706,0.334372990781356,1.62961133316795,0.946895611469467,1.94826728407911,0.891283655081389,1.47302953737419,0.664601683750863,0.541607727530031,0,0.390178042679635,0.493313713811028,0.829050053357545,1.15921234294021,0.296573126324121,0.267540828089713,1.04535523804977,0.566546713487831,1.53288197440768,1.71813722741315,1.01207876807801,1.91139248594458,1.95325036156926,5.70271226669025,1.35517607169996,1.27986611154418,2.49861453104692,1.89421801635213,2.46338399076314,1.81446068902259,4.27904313253612,2.17236605824198,0,2.01210257911091,1.02290049474824,2.53007406669196,1.00267582127178,2.02785126545153,1.5905718941022,1.45990461090791,0.189069634328136,0,0.087834785693126,0.654895377488563,0.728590576585084,0,1.9472843619281,1.56716763569341,1.86141144726411,1.19245312152671,0,0.371457501329565,0.198762407366705,0.860234595106124,0.694281003215189,0,0.419499436209906,0,0.417989933073621,0,0,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0.366403487860815,11.8602375692457,11.6334079244498,0.436094052142534,2.48485975847659,0.506522046658319,2.25095607382472,1.14734648299525,0.709336764396714,0,1.06748995729705,1.48000529050296,0.311211035399766,0.67355336034844,0.163461903113459,0.605429710579726,0,1.17160715916898,1.24864030732128,0.570471821544449,1.49448680551801,1.52664848236894,0.971237666208789,1.12360645361799,0.816616685019573,0.737005903870608,1.44656093646072,3.56400857184616,1.7308685049499,2.73048408581408,3.59309070908119,0.168336113954066,0.250237039743928,0.277064115484183,2.19488810440419,0.612975591598039,3.15499923703853,0.680593098960126,1.4351170855109,3.20336083227851,1.69545520927649,1.50045548042201,1.44273540933814,2.06112432036503,0.744467425326359,0.168776332241266,1.36411807225678,1.00973509697646,1.10459878370759,0.969876340912871,0.710019185033229,1.0075209822764,1.01736355386293,0.193260853163297,0.818238361772504,0,0.609868530647977,0.795178609928912,0.580969714347592,0.725627385107593,0.504641701751257,0,0,0.643240938192885,0,0.928735856063958,0.721879481669586,1.0647612003586,1.18009283054671,1.20505514941741,0.772057809126758,1.96091499683166,1.18635309555548,0.269662616320329,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,1.7658523976586,0.491953754172454,0.514703430895577,0.109750285408626,1.1240175325762,0.100528972411631,0.740707561268237,3.58389135841357,2.07986957055916,0,0.811512834825538,0.587043471179108,1.15493158208859,1.85194205030644,0.951270761172991,3.1608175918371,0,2.21595305478658,3.27605971194933,4.16167254408439,0.93733833986777,0,0.708875486211932,0.358234090811393,0.871901815541886,0.383382679165211,2.46331618947972,0.44024217006613,4.97587477297853,7.63835753109896,3.66103056936502,2.03193261734941,0,3.51652341630141,0,2.36503233217644,0.901029173531752,1.71495859578347,0.897048674762886,0,0.22001485746285,0.387815147273333,0,0.845302752556,0.26593811658487,0,1.28603687131071,0,0.799266537048298,0.57191197463259,1.08524321078289,0,1.62868092146868,1.06617584622764,3.16780749173372,0.602878754119172,2.61460037580088,0.799783929456456,4.86495122564762,5.52482800575339,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.205476322550383,0.358121926479791,1.00876629594175,5.12279976525011,3.88129634747131,4.62034930607094,0.508189248444927,0,0.773288812777695,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| |||
|short_description=p6@TGIF1 | |||
}} |
Revision as of 18:21, 20 January 2014
Short description: | p6@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TGIF1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000551557_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.31e-38 | 72 |
leukocyte | 3.58e-38 | 136 |
granulocyte monocyte progenitor cell | 8.12e-37 | 67 |
hematopoietic stem cell | 9.63e-37 | 168 |
hematopoietic oligopotent progenitor cell | 1.98e-35 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-35 | 161 |
hematopoietic cell | 4.73e-35 | 177 |
myeloid cell | 5.87e-35 | 108 |
common myeloid progenitor | 5.87e-35 | 108 |
macrophage dendritic cell progenitor | 9.12e-35 | 61 |
monopoietic cell | 3.14e-34 | 59 |
monocyte | 3.14e-34 | 59 |
monoblast | 3.14e-34 | 59 |
promonocyte | 3.14e-34 | 59 |
myeloid lineage restricted progenitor cell | 1.78e-33 | 66 |
defensive cell | 3.49e-33 | 48 |
phagocyte | 3.49e-33 | 48 |
nongranular leukocyte | 6.78e-32 | 115 |
mesenchymal cell | 9.23e-32 | 354 |
classical monocyte | 9.45e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.45e-32 | 42 |
hematopoietic lineage restricted progenitor cell | 4.16e-31 | 120 |
connective tissue cell | 6.10e-30 | 361 |
motile cell | 1.60e-27 | 386 |
multi fate stem cell | 7.03e-27 | 427 |
stem cell | 7.34e-26 | 441 |
somatic stem cell | 1.14e-25 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.81e-34 | 76 |
hematopoietic system | 1.38e-33 | 98 |
blood island | 1.38e-33 | 98 |
bone element | 2.99e-31 | 82 |
hemolymphoid system | 1.18e-30 | 108 |
connective tissue | 6.96e-30 | 371 |
immune system | 3.86e-29 | 93 |
skeletal element | 5.22e-26 | 90 |
skeletal system | 7.94e-24 | 100 |
musculoskeletal system | 5.14e-15 | 167 |
lateral plate mesoderm | 2.97e-13 | 203 |
mesoderm | 2.69e-09 | 315 |
mesoderm-derived structure | 2.69e-09 | 315 |
presumptive mesoderm | 2.69e-09 | 315 |