FFCP PHASE1:Hg19::chr18:48405463..48405551,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6984 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=28bp_to_uc002ley.2,uc010dpd.2_5end | |||
|description=CAGE_peak_1_at_ME2_5end | |||
|id=chr18:48405463..48405551,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.60e-25!112;CL:0000049!1.60e-25!112;CL:0002194!9.89e-21!63;CL:0000576!9.89e-21!63;CL:0000040!9.89e-21!63;CL:0000559!9.89e-21!63;CL:0002032!6.61e-20!165;CL:0000837!6.61e-20!165;CL:0002057!6.93e-20!42;CL:0000037!7.97e-20!172;CL:0000566!7.97e-20!172;CL:0002009!1.86e-19!65;CL:0000766!5.39e-18!76;CL:0000860!1.19e-17!45;CL:0000988!1.99e-17!182;CL:0000557!3.42e-17!71;CL:0000839!6.89e-16!70;CL:0002087!2.80e-13!119;CL:0000738!1.77e-12!140;CL:0002031!4.30e-10!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.96e-17;39!CL:0000234;4.96e-17;39!CL:0000860;1.95e-16;33!CL:0002057;1.95e-16;33!CL:0000576;2.48e-14;48!CL:0000766;2.53e-10;69!CL:0000763;4.04e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.03e-27,108;CL:0000049,1.03e-27,108;CL:0000473,1.07e-23,48;CL:0000234,1.07e-23,48;CL:0002194,1.26e-23,59;CL:0000576,1.26e-23,59;CL:0000040,1.26e-23,59;CL:0000559,1.26e-23,59;CL:0002009,3.77e-22,61;CL:0002032,2.53e-21,161;CL:0000837,2.53e-21,161;CL:0000037,3.35e-21,168;CL:0000766,2.96e-20,72;CL:0000860,6.93e-20,42;CL:0002057,6.93e-20,42;CL:0000557,1.72e-19,67;CL:0000988,5.41e-19,177;CL:0000839,4.43e-18,66;CL:0002087,1.31e-14,115;CL:0000738,1.26e-13,136;CL:0002031,3.65e-11,120 | |||
|ontology_enrichment_development_v019=CL:0002057;7.51e-15;42!CL:0000049;1.90e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!2.22e-15!51;DOID:0060083!2.22e-15!51;DOID:1240!1.56e-13!39;DOID:8692!5.88e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.48e-10;39!DOID:8692;1.17e-09;31!DOID:2531;3.77e-09;51!DOID:0060083;3.77e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.22e-15,51;DOID:0060083,2.22e-15,51;DOID:1240,1.56e-13,39;DOID:8692,5.88e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!7.62e-13!80;UBERON:0001474!1.12e-12!86;UBERON:0002390!7.99e-12!102;UBERON:0003061!7.99e-12!102;UBERON:0004765!2.81e-10!101;UBERON:0001434!2.81e-10!101;UBERON:0002193!8.61e-10!112;UBERON:0002405!1.83e-07!115;UBERON:0000073!5.69e-07!94;UBERON:0001016!5.69e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.51e-14,76;UBERON:0001474,2.80e-14,82;UBERON:0002390,3.50e-13,98;UBERON:0003061,3.50e-13,98;UBERON:0002405,1.59e-12,93;UBERON:0004765,1.50e-11,90;UBERON:0002193,6.55e-11,108;UBERON:0001434,1.35e-10,100;UBERON:0001016,3.48e-07,89 | |||
|phase1_expression=15.0793054794562,14.1306345768049,14.2363948136931,12.0087958023756,17.8784437770915,17.4467704820074,25.3299878168311,23.3736353167927,51.9759400117679,13.515366507583,7.6758128476967,9.61142037372758,5.80287352102598,15.0994950611257,21.8722267980424,14.1188280754873,16.2727522566474,13.8758917173601,15.6138495612962,15.3901322595985,15.0960511520747,9.71709636582072,26.9061827903193,41.8835740723026,40.5502725891213,37.8246358452359,40.886093546073,36.3643809669198,34.2226920858546,29.5548636534854,34.0595471295367,22.0661093874943,11.1446189947953,38.0846630471791,137.349346628875,140.178863232598,39.0488584315347,57.6155224873153,22.2604336691857,48.1764132989191,69.1898815401366,56.6813915533214,56.4090493118869,84.6217749697067,105.427388289178,88.5431823335529,68.1017078133656,111.426497653915,69.3742270805032,97.2400286048869,96.3164256549418,91.5186229668825,52.7460891527026,76.8126773464753,69.0675081631143,73.0380277425306,105.887586222444,86.5185415113576,54.7890167343916,89.218269527154,51.7863071897223,107.861375161056,87.764009353518,97.605467871987,52.5278721917737,82.8382428049064,47.9573131726593,115.825634683359,104.29658368404,100.558435098469,45.4049626975027,58.5561441220228,43.3553470794012,57.0389273042243,51.8754491914706,50.1084162765018,43.3588516225471,49.2580208520141,77.9519095480839,39.9017841237748,59.0782531281298,69.2297142767963,15.839662001519,19.6609900054367,15.1216573156804,34.9918782504536,30.4300950147369,12.0698012390441,20.4923910563307,19.0810750907073,14.7995371968457,22.3150131960957,25.2300330562651,21.1474125726441,20.1783082673353,36.8737718685108,26.3591091952536,6.28817220398664,22.204961891947,23.4061093546949,13.6887351986108,8.5220605032252,13.6378709885538,28.85530833326,12.668054021418,16.6150420937716,16.789839553431,34.0722910470296,33.6853710180085,32.2298293023205,25.1478516185122,25.2128684589496,13.1975041214234,17.6576946539211,22.9978152370949,27.9874076462988,13.7959377696692,16.8377448286489,20.2415753615602,7.00843911513013,4.55758417699493,8.55406840003537,29.3621482201657,36.9881306236269,14.9916871862815,8.05042656949657,11.4957919568947,26.6120901056647,12.0348088102578,26.0683926989038,46.3233045996527,73.1063937076963,34.0114414503791,27.1079364288425,22.560205978615,20.2785126545153,17.4962908351242,9.73269740605272,28.0768406977282,21.9512103487938,16.9521136387733,23.9691708160814,6.19301990097322,12.977455497455,49.0066564418572,52.5871806643787,58.6344605888195,18.3637780715113,17.731842234184,39.3744951409339,31.4044603639394,31.8286800189266,25.3412566173544,43.5287115281487,32.7209560243727,38.2414078296694,26.9603506832486,25.5832591577636,36.9996913194179,28.451252084997,13.696196781711,23.5684352772739,14.6437234528902,43.3842434808125,17.8231228533987,42.0601720218016,65.1135180615892,59.3462502147108,18.397996495906,24.6809071487714,31.3274982120996,38.2163210564583,11.6334079244498,12.210633459991,21.3697939228987,21.7804480063077,27.805927970776,33.84672124836,30.5014808690587,21.86642640555,24.5522690178321,17.5133959376184,36.1004801063729,36.9107241470945,30.2404520759899,21.4927547255803,14.404398112,13.1220001826926,29.0308871452198,19.3960419325113,23.4634428466328,45.6820199724245,38.6876337039834,29.7755710208767,31.8480507157633,26.2865439047183,45.8766468420399,27.3240657174872,21.759489776513,11.8320977051943,5.03032699271367,31.9838616512726,42.7905337962117,32.4165015116494,22.3878586649227,18.6957555437402,24.9395177784951,32.441604383766,13.0954434052869,11.5320989962026,18.861939203201,12.9039171316293,20.198295730734,24.7334918443804,13.2142967995429,21.7721468591233,15.2976098103082,15.9033277773792,15.2802831746217,16.4878977955188,21.3005755509969,21.2586927260321,11.8692414617341,24.5441283517387,26.7291198179018,30.6880917066234,38.7876385492113,41.2167579479819,31.837140346248,39.8058451259022,39.362052736598,78.8351095603793,7.8224766164908,10.2918550110862,17.9575397758225,14.3954057689914,10.1063127433742,22.2416784074907,23.7704413010123,25.7881801975326,24.0440860556619,26.5812921792736,26.5743093404428,24.1348041606694,24.3314616755429,32.3187611834968,27.311751821112,9.81692416624121,5.3504621473082,2.94017422771084,20.2808055714929,24.5706804169407,38.9921338409727,44.5877730408797,7.74827162821615,22.6469509594054,25.9010673564356,20.2323155863715,32.9735029510149,33.1466633667536,18.5710734026885,14.5590869939141,25.9796415645492,20.2878208706384,22.1902432105703,13.2817131940188,18.5194205030644,25.113548094967,0.790204397959275,4.29243081047436,97.9943684227841,70.6692880720498,131.389947463236,15.9347517777521,23.6854800760392,33.1753727547184,37.3459039670877,31.9697332365358,26.8367875415648,46.3103443622187,21.6599147672536,9.53709331487551,11.38547631994,16.6640012122822,45.9089775732382,29.4131087679874,16.4104426094066,18.8179690624976,34.4472100556134,34.2391085942066,33.1558661851471,23.6596587968711,27.4654843364966,26.6217977530049,21.8469199630644,14.3062578340753,33.81211010224,19.6794206272804,21.8415617513869,5.65856223376713,24.1143524439573,7.45982101245078,20.7318090804314,9.76718889704597,17.2880470723961,32.5736184293735,14.9264618471869,26.1344118068032,28.9381801977203,18.3022026306062,36.3901687902688,116.758829415543,155.197441252527,94.8752727673642,19.8888630058014,25.2696258835051,64.1866072683233,23.8889156001506,25.6845403187979,20.2338888461082,73.0795138837798,34.2833522751353,18.328343863059,32.2141021062168,54.6303442078296,55.9601371587773,41.7575958899955,44.3918103136024,45.2936513673746,59.1715548918274,38.8909896965232,115.621928248654,19.5079471833432,12.0040925054323,27.669032417373,25.7883868298201,26.7643483195743,36.7446627029068,35.0252830828212,18.6586581831186,15.9185252839189,19.6598835455759,24.5763471458112,17.3307018429201,19.4619296408506,6.46143819627044,10.2943027143257,31.221971944556,32.3571301227925,20.2782359826544,4.85004114314015,4.99306318531491,6.95497674658265,11.164851351845,11.6631099698927,8.98112302185835,16.6580894032411,8.18731598506726,12.5466058492014,13.3576259800492,29.6082612101099,18.111295981939,38.1070003904074,19.212413879794,30.4471191565093,9.54789651773816,17.0430499757792,57.9189420406788,37.3146956534972,33.6868660812426,20.0620354887919,12.6335891614075,35.7351164164484,11.7652465376528,8.76835347919564,31.3488337811841,11.3733384070897,19.2205886962463,26.9894895127674,9.25363516141736,10.5669110642103,7.5253466078228,31.8595341306298,26.5944322857192,16.342857094719,9.64743457242112,9.41167623689642,30.7740150139667,13.4486004736879,47.8306240156525,22.9781455974421,39.3748698718877,31.6836479695058,19.5250282918699,16.251506150913,22.4957501781823,26.2944353754572,35.1230847021389,37.1478892837234,36.8023648533697,13.8572115880073,32.9187895185299,41.5053675516411,19.4089837709887,40.4948042634396,26.1378491616544,24.8844789364439,60.2900373899078,26.9610418592426,24.5553630527899,25.0933417257816,20.0221827114458,18.6307110610958,27.8378557464023,22.4242305115743,48.519336605535,21.5851854228607,27.2086305258104,21.731842107316,9.72411606983069,26.960156246137,19.0921948755562,21.9785619255784,14.3897966066652,26.6300918843973,30.1599750004957,24.4640802703712,31.7020642346017,40.0195533427032,5.36397112998549,36.3133099550614,22.1865308189186,33.3059783835485,33.5130873730299,25.9918668226558,22.054613741845,24.5472420839251,25.868602229972,12.1542862196004,16.3973688011658,31.8569291831445,24.1662328517805,31.8316030861433,32.4109655981156,28.0992257297526,32.813736736275,38.3141949196246,16.6775031885155,13.8303855043159,16.6968196456915,12.5976499288194,27.7119684649475,25.4714864703599,27.2227462153306,19.8643419639004,15.067688043493,6.73885902670502,7.98174276366016,28.0262548252491,14.2085330585007,17.5866557642746,19.3680043639215,40.7376336032819,48.9521104972571,20.1026726469742,15.1208802426672,16.6556287021797,58.6464150489828,139.559579013187,9.80160863924127,161.648762359375,56.9863391256957,82.8802475009024,84.6553508190047,69.2540418871874,31.7898914419729,55.6701522563812,82.1293508894625,58.9674074038263,69.3833424260904,132.707871719751,70.1776535852188,70.0867960098638,62.4687612153391,83.3432790699026,48.1206248590069,78.6627239490701,35.9471694240896,33.32774007597,37.5410568851794,109.026557234338,54.2892039095723,91.0846752213071,37.5933393081617,36.6379164797602,28.1974010175699,37.0538270008275,34.1364057703513,64.1997160054926,44.2430235581589,7.10340367016033,12.6534576910976,11.8785872333055,10.4434638713739,48.7132347405486,25.6018337867133,20.0355669041231,61.1422373381278,50.6700979507184,24.9059985313837,42.5477229917967,47.3633565966039,26.4875887680581,50.9571094608828,23.0169294869738,22.556956137979,10.5622493058609,64.4581186485858,36.3007732743916,31.1328020051022,17.7819184231419,28.1106496367613,29.5930233136306,39.9227596002388,5.98983850496036,11.1074199995169,30.4499821682613,8.07933482827048,22.3743212257634,35.6945399469584,48.953559000288,34.7009489926073,44.7952486927894,40.7441037474366,24.842866356834,67.1359639795166,38.9238994957911,36.3523571312863,57.0402032600329,27.6703697338235,43.0819369820884,21.0074205715366,39.7657774906034,13.3727064545075,21.0930464362965,25.2061902859059,10.5270382711533,25.8305213393252,10.6606955203727,53.140515061783,57.6117540969741,66.3184610781624,35.8697100381317,33.7227559026512,30.8791720035551,28.8425673740761,44.3433055355257,51.6945258093666,13.7115558853684,10.6014803575456,66.2149237610799,38.8152153120617,72.1813726347248,31.7735675365485,44.7746904307739,44.6065819596875,43.2306870952585,37.1380242723531,35.3134164811467,27.8774690413154,42.6944206764658,30.3280159344739,71.8629923420915,41.8259467020354,59.2854508638453,43.4623321515296,26.5383634439649,35.7769738206492,61.4870974985676,26.5861549082874,17.8735656172769,23.2310359621347,17.9208644659438,17.0765727617876,60.1848080877022,50.5058838555231,47.0363507589013,24.8989330819951,17.472666824203,41.1046617607164,21.1896365523096,20.8304553695629,22.9102125178454,22.0165067428712,57.3664823494752,22.8240548188338,37.0013196546227,17.4868858298631,35.5173565312479,11.1464288158838,30.0595575943251,29.66996626877,34.7668720672907,29.2503546822835,47.6472240050209,25.2244646857088,8.35517828331268,34.2936998160594,13.4345599731573,23.3755234446616,22.280406264527,20.5016417449007,26.5834542709397,45.0315216532342,30.2560887351305,126.469122186303,33.0919389893367,58.0981052957285,41.6130777895659,58.665068546991,48.8153656712233,28.3544180708567,39.9180224767011,73.8697524132598,37.7571115375402,15.4928949923234,57.0830152684524,23.7137378744743,21.9226183293903,22.1757659280268,0,127.518038091071,54.8708485968419,33.2336310912244,59.9609243774522,40.9867521059757,39.4668321127726,21.8224674804955,19.3450488639487,38.0899720245815,23.8158628195479,29.4733345299001,14.9495576184745,30.4128969175891,21.5144807199414,30.3226011764724,47.1698915406422,51.6431736885037,76.0262927587702,17.9189868578725,16.4202083328241,18.6154795262363,26.3406421437472,64.3605362674817,20.4465626142506,10.8779607859321,29.7501034366507,22.5261711150776,64.5121952244137,28.0333115694503,49.9573566622242,10.5722253347501,28.2986643304391,24.3666672904482,20.2977137120126,59.5399226174341,27.4680168338143,62.7231881661614,17.2352139597949,19.0406231179316,15.5427734294074,22.9759182572596,23.9347020418157,16.1765719137741,48.7337498981842,44.4175604243146,26.9160501018975,217.322085166537,50.5836475008046,39.0586374501302,40.1211041315069,61.8653019412428,52.4705946694101,65.9424920488875,33.4077463971404,55.263518885212,38.2591515532578,27.313628928298,33.8884299278475,28.8499047981359,22.9177636382858,15.3456420069071,16.9064132103342,59.956097919994,27.3727972011463,28.4450077066488,26.3182166981548,26.9211536506657,40.4822800947244,17.6999770838936,17.0029545214751,16.7480280171537,19.3045672870342,13.9739576367413,25.5139492153093,35.8046245220102,13.8204980993945,18.5820263683505,10.6727764772054,27.0705204315059,12.4008607045578,18.5433680798708,20.5417188147211,37.8554694685953,41.4132635375702,38.3850448561117,23.2284919849038,22.6705925512272,21.9946350607642,31.0815614723214,52.6521192779573,13.8960651222437,26.5333699990236,24.9131695783692,27.5867074727408,31.5922364021246,7.6872455576384,36.9610465652382,10.6350984662084,30.6933728256842,29.618766943587,47.9642073531241,55.7757994412429,27.1916174542522,15.9752390689918,17.538906238766,44.5971892756494,71.6968423544627,21.6990874372628,31.213377446176,29.0887401397908,65.4636096127,39.8129446421103,78.9108270943531,43.022099747276,33.0258477897382,54.604819096007,25.2901469631498,44.8533081414551,18.5903646388503,66.478745238816,24.1683306496598,110.169857766751,75.2536503388341,21.8659085088224,21.7434288920772,34.6195523269917,35.4241440813962,30.1707993618016,38.1516437487804,56.9682033461083,22.8218933131919,37.7853010778532,24.2708014440562,24.7332250622585,36.2167050677563,15.2245736772994,39.0476751588143,25.9339824917674,46.9444749720868,13.3273868817904,27.3765595191296,32.2728109925632,25.008448359459,18.595375308181,14.2481568233784,16.1163133976579,34.2415554015261,43.7403735223755,29.3495251031681,35.8933485697513,62.9021030370952,7.12735096914337,25.306770097854,24.6219742103469,25.9357728108378,52.4987799160721,30.2655349996942,77.0846317380522,53.2729527762036,17.917878772853,40.7928315947459,17.4917769626167,42.005294979682,25.9144727837625,15.1288116331479,22.2462803784138,31.4757302330561,23.8815696672323,36.9959255574202,39.2658249819083,21.3768315306435,16.7213090760468,26.7322275220695,51.8284646483343,27.8979420883501,23.2970084885456,36.8787227775916,27.5597498336839,19.4619063887103,20.7377898544228,7.744092458765,36.3279242242836,42.7771291890972,60.5443481773029,10.9971296901144,25.7471300101386,40.1326354370522,15.9953267470843,21.004149993662,29.1383840707624,45.9674474403405,40.3464830945051,13.9177731760584,26.2283936251935,34.8569800558537,52.7219554177626,46.9734358571396,31.5119568888698,45.0756118656259,60.0832117395361,115.529714687593,36.2808870436569,30.1003069671375,39.9591764458866,78.7159667319431,54.1811369237249,37.4278464412128,36.3483925721724,24.8093587444213,93.9839179798536,42.2843745106666,40.6760504614461,12.8558835796073,31.7605384544123,5.77737840162011,64.2696021656935,10.5507735183044,22.3609749716264,61.2153661309556,23.933004547202,50.1803293891434,48.6704693274168,10.415860508669,12.4787419730483,11.2482906152185,43.0227508687619,44.2525566452967,22.6790316810472,30.2906824333686,84.1734826586516,65.3372735692747,52.8992907906911,36.6768899376279,40.9985119138953,49.7501663675268,23.686156052374,23.6689719910089,23.5683787149103,35.1363669507873,35.382587148639,34.4244818122483,21.1308565483507,22.6371251633206,21.7716747896961,15.4004985488376,20.40767206342,25.8917161467562,30.6047528022332,22.0602857935741,41.623664892309,65.6445759775596,11.4976258696431,25.81050366438,25.670703278402,26.8551477688387,44.6057038704293,36.6318304335668,70.5250683067112 | |||
|short_description=p1@ME2 | |||
}} |
Revision as of 19:22, 20 January 2014
Short description: | p1@ME2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ME2_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_uc002ley.2, uc010dpd.2_5end |
EntrezGene: | ME2 |
HGNC: | 6984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.03e-27 | 108 |
common myeloid progenitor | 1.03e-27 | 108 |
defensive cell | 1.07e-23 | 48 |
phagocyte | 1.07e-23 | 48 |
monopoietic cell | 1.26e-23 | 59 |
monocyte | 1.26e-23 | 59 |
monoblast | 1.26e-23 | 59 |
promonocyte | 1.26e-23 | 59 |
macrophage dendritic cell progenitor | 3.77e-22 | 61 |
hematopoietic oligopotent progenitor cell | 2.53e-21 | 161 |
hematopoietic multipotent progenitor cell | 2.53e-21 | 161 |
hematopoietic stem cell | 3.35e-21 | 168 |
myeloid leukocyte | 2.96e-20 | 72 |
classical monocyte | 6.93e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.93e-20 | 42 |
granulocyte monocyte progenitor cell | 1.72e-19 | 67 |
hematopoietic cell | 5.41e-19 | 177 |
myeloid lineage restricted progenitor cell | 4.43e-18 | 66 |
nongranular leukocyte | 1.31e-14 | 115 |
leukocyte | 1.26e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 3.65e-11 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.51e-14 | 76 |
bone element | 2.80e-14 | 82 |
hematopoietic system | 3.50e-13 | 98 |
blood island | 3.50e-13 | 98 |
immune system | 1.59e-12 | 93 |
skeletal element | 1.50e-11 | 90 |
hemolymphoid system | 6.55e-11 | 108 |
skeletal system | 1.35e-10 | 100 |
nervous system | 3.48e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.22e-15 | 51 |
immune system cancer | 2.22e-15 | 51 |
leukemia | 1.56e-13 | 39 |
myeloid leukemia | 5.88e-10 | 31 |