FFCP PHASE1:Hg19::chr19:2476116..2476132,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4616 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4096 | |||
|TSSclassifier=strong | |||
|UniProt=O75293 | |||
|association_with_transcript=0bp_to_ENST00000215631,NM_015675_5end | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_1_at_GADD45B_5end | |||
|id=chr19:2476116..2476132,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.48e-21!42;CL:0000738!5.42e-21!140;CL:0000860!3.29e-18!45;CL:0000766!2.73e-17!76;CL:0002087!4.66e-14!119;CL:0000557!7.48e-14!71;CL:0002031!7.97e-14!124;CL:0002009!3.76e-13!65;CL:0002320!1.76e-12!365;CL:0002194!3.27e-12!63;CL:0000576!3.27e-12!63;CL:0000040!3.27e-12!63;CL:0000559!3.27e-12!63;CL:0000134!4.28e-12!358;CL:0000839!5.31e-12!70;CL:0000988!6.84e-11!182;CL:0000037!4.57e-10!172;CL:0000566!4.57e-10!172;CL:0002032!7.72e-09!165;CL:0000837!7.72e-09!165;CL:0000219!3.26e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.21e-16;33!CL:0002057;6.21e-16;33!CL:0000576;8.12e-12;48!CL:0000473;1.74e-11;39!CL:0000234;1.74e-11;39!CL:0000766;2.59e-10;69!CL:0002087;8.64e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.64e-22,136;CL:0000860,4.48e-21,42;CL:0002057,4.48e-21,42;CL:0000766,4.34e-19,72;CL:0000473,1.20e-18,48;CL:0000234,1.20e-18,48;CL:0000557,1.90e-15,67;CL:0002087,3.69e-15,115;CL:0002031,6.99e-15,120;CL:0002009,8.62e-15,61;CL:0002194,8.53e-14,59;CL:0000576,8.53e-14,59;CL:0000040,8.53e-14,59;CL:0000559,8.53e-14,59;CL:0000839,1.92e-13,66;CL:0002320,3.69e-13,361;CL:0000134,9.11e-13,354;CL:0000988,1.11e-11,177;CL:0000037,9.63e-11,168;CL:0002032,1.79e-09,161;CL:0000837,1.79e-09,161;CL:0000219,9.93e-09,386;CL:0000763,2.76e-07,108;CL:0000049,2.76e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.18e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.41e-15!112;UBERON:0002405!1.61e-14!115;UBERON:0002390!2.28e-14!102;UBERON:0003061!2.28e-14!102;UBERON:0002371!2.21e-12!80;UBERON:0001474!4.29e-12!86;UBERON:0002384!1.35e-11!375;UBERON:0004765!1.92e-08!101;UBERON:0001434!1.92e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.14e-17,108;UBERON:0002390,1.28e-15,98;UBERON:0003061,1.28e-15,98;UBERON:0002405,2.02e-15,93;UBERON:0002371,1.02e-13,76;UBERON:0001474,2.46e-13,82;UBERON:0002384,3.08e-12,371;UBERON:0004765,4.12e-12,90;UBERON:0001434,2.57e-09,100;UBERON:0003081,1.78e-07,203 | |||
|phase1_expression=459.827977933779,250.49761295245,312.07305066848,256.187643784014,176.102671204351,180.574074488776,215.304896443064,55.5913488615611,57.7220238321643,159.481324789479,251.906221638046,127.13287857976,123.442945810916,137.751950844532,87.4889071921698,35.6332327619441,30.1347264011988,32.1336439770444,22.9328415431538,181.480439605185,146.676497004618,152.965904081307,44.0803420181827,35.450476093877,96.1656619296189,127.151907164591,118.389049986822,92.8000111688278,584.93267967432,441.403807811795,451.288999466362,26.6632155098889,21.686826152034,33.2778609150109,160.976842805867,76.913554775695,31.7088474481635,931.820277150618,702.306655040436,478.725980799169,117.55562397596,142.513213048351,113.590825326676,74.5892964939167,80.8654519494052,137.545162693492,416.512834134987,492.579129850147,921.376453412933,890.407954237056,701.624175183207,1486.52729707965,1877.14023161089,1569.81875047587,2376.7348397307,252.621219666176,238.519975150557,486.751067308053,1535.92897191719,1264.13943765273,2006.87923788319,322.924422882795,378.183094850614,548.125029185045,497.418635009393,360.289617678874,648.980783453389,861.531673165373,855.23198620913,1486.65764200652,566.653934464833,592.558716303992,877.550200373573,276.110659209708,262.353706156864,286.60336840995,222.635346932353,180.812978981174,129.062646117755,150.486728695379,127.306673407418,143.391360705238,22.879511779972,28.3992077856308,20.4587128388618,172.825740139435,31.230886988809,28.7376219977242,25.7807500386096,36.2540426723438,253.868984222814,420.461827589592,454.140595012772,409.73111859498,560.508562981536,11.8522838148785,250.018117814682,333.273126811292,405.651757526032,78.0760933474467,243.463933175292,210.684273551956,146.120046305933,49.4662428570171,201.510440712789,173.017971669808,123.215758013082,33.5599257681269,46.8213651215562,49.3313713811028,51.1247532903819,53.3237677752497,78.8884516022161,52.1704614774941,77.3562876156828,27.1942422474159,130.678188318255,105.83725320865,105.256191880113,45.8734196626699,54.6910101239392,55.1262185780057,52.7012916772205,35.9642377343916,43.7257542933211,44.0405688801871,54.1944477967891,480.227262361313,467.485462229571,291.676349419957,65.8278539047697,46.9490601792545,98.7098977432054,53.4929945529158,101.27025794845,77.7825806819623,147.923186151504,177.135092790159,65.1344890260428,81.1529594712984,85.3754116937185,123.185820505599,77.959191694604,67.1119841439817,21.7446753748638,22.9851253235033,20.3425679593864,481.035589223875,432.428152549777,269.306688463935,26.6341625871385,45.5924335406246,43.3925627009493,20.9163938511884,50.7594317813986,47.5954212556317,39.709043641994,79.0755283058146,67.2398236477882,184.765778246098,107.152598351033,129.246257972147,135.698503996782,40.4429388380456,107.748879068274,26.4327195720876,9.6547630229253,13.963823579932,30.6633274931766,25.6301728083395,17.2209639294583,905.331467785755,1589.89908300813,65.8502018735227,145.612781846728,70.9130865321647,61.1730415357071,89.4930256736299,35.1121698376373,54.9464048139461,86.466686541061,150.713872082885,50.7273987701619,64.6611225934503,51.327037577626,95.8092516992416,50.1273054297599,89.7451083923441,14.9836836878554,39.9330275081115,36.7643754157431,147.732599293856,57.1411493619504,53.3713065468544,37.3602133396455,35.0077804338539,108.078767109851,29.7000714320513,34.8646370282765,288.521151734354,494.409281569572,40.9056756908381,38.1611485609491,40.7284249761749,30.7284334616587,84.2841438447304,21.7845185414565,89.6114246964166,121.626172997048,121.941269015402,80.9579862429526,108.032794590385,55.5453132595186,149.173872686419,107.76165981599,171.139200892644,146.837566777926,106.77948650526,109.079129891125,26.3483072614663,101.887753052268,90.5761363066486,103.940643086329,22.2249981137791,15.5465288736776,13.1930113878942,18.0521085071801,7.28913725768169,19.2881945163401,29.1287564593191,10.849796587652,9.85438869504741,84.4827474581006,269.517953102819,82.8809528114883,270.726502042644,103.95064536042,17.6277132059367,19.892993429216,11.8095404642906,19.5220331736337,20.0449088565014,13.2871546702214,17.3932387526612,14.716609884401,12.6966561792309,36.1696172766078,113.595836780791,127.999517524065,177.880540776506,409.418762474514,287.968374486544,436.002951130876,109.041385555419,36.4045778087616,43.2350881952284,21.401305654682,64.0689993568432,24.9311851580844,29.4431255604124,66.4648942833062,39.517521840624,77.9389246936476,23.7657330198907,111.538259524031,123.144579940196,140.284610310713,109.205883382659,43.4612418877601,48.0752250773129,32.7468618096238,9.59417487070874,9.06650089961242,23.4334584966942,54.2582274082316,13.6104093352691,90.9914590660939,66.2645379811833,27.22017022073,238.449007141637,30.4647581685762,1527.59355530441,663.960625391941,1398.38743506401,13.4615535899398,66.083997621582,29.3043618025117,37.6359381249951,17.172191281455,10.812350082381,5.71652865261156,72.5488115714484,57.1107690171597,36.5958046246541,79.3728334752755,3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| |||
|short_description=p1@GADD45B | |||
}} |
Revision as of 20:24, 20 January 2014
Short description: | p1@GADD45B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GADD45B_5end |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | 0bp_to_ENST00000215631, NM_015675_5end |
EntrezGene: | GADD45B |
HGNC: | 4096 |
UniProt: | O75293 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.64e-22 | 136 |
classical monocyte | 4.48e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.48e-21 | 42 |
myeloid leukocyte | 4.34e-19 | 72 |
defensive cell | 1.20e-18 | 48 |
phagocyte | 1.20e-18 | 48 |
granulocyte monocyte progenitor cell | 1.90e-15 | 67 |
nongranular leukocyte | 3.69e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 6.99e-15 | 120 |
macrophage dendritic cell progenitor | 8.62e-15 | 61 |
monopoietic cell | 8.53e-14 | 59 |
monocyte | 8.53e-14 | 59 |
monoblast | 8.53e-14 | 59 |
promonocyte | 8.53e-14 | 59 |
myeloid lineage restricted progenitor cell | 1.92e-13 | 66 |
connective tissue cell | 3.69e-13 | 361 |
mesenchymal cell | 9.11e-13 | 354 |
hematopoietic cell | 1.11e-11 | 177 |
hematopoietic stem cell | 9.63e-11 | 168 |
hematopoietic oligopotent progenitor cell | 1.79e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.79e-09 | 161 |
motile cell | 9.93e-09 | 386 |
myeloid cell | 2.76e-07 | 108 |
common myeloid progenitor | 2.76e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.14e-17 | 108 |
hematopoietic system | 1.28e-15 | 98 |
blood island | 1.28e-15 | 98 |
immune system | 2.02e-15 | 93 |
bone marrow | 1.02e-13 | 76 |
bone element | 2.46e-13 | 82 |
connective tissue | 3.08e-12 | 371 |
skeletal element | 4.12e-12 | 90 |
skeletal system | 2.57e-09 | 100 |
lateral plate mesoderm | 1.78e-07 | 203 |