FFCP PHASE1:Hg19::chr19:3969608..3969636,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:3969608..3969636,+ | |||
|id=chr19:3969608..3969636,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002188;9.92e-21;5!CL:1000746;4.07e-15;7!CL:1000612;4.07e-15;7!CL:0002539;6.94e-11;10!CL:0002681;3.13e-09;12!CL:0002584;3.13e-09;12!CL:1000306;1.31e-07;4!CL:0002547;1.31e-07;4!CL:1000449;1.44e-07;15!CL:1000497;8.84e-07;17!CL:0002518;8.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,8.98e-21,5;CL:1000746,3.79e-15,7;CL:1000612,3.79e-15,7;CL:0002539,6.61e-11,10;CL:0002681,3.01e-09,12;CL:0002584,3.01e-09,12;CL:1000306,1.31e-07,4;CL:0002547,1.31e-07,4;CL:1000449,1.40e-07,15;CL:0000115,7.08e-07,36;CL:1000497,8.59e-07,17;CL:0002518,8.59e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!6.22e-08!5;UBERON:0004117!6.22e-08!5;UBERON:0007689!6.22e-08!5;UBERON:0007123!6.22e-08!5;UBERON:0003091!6.22e-08!5;UBERON:0000947!1.67e-07!21;UBERON:0010191!1.67e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;4.07e-15;7!UBERON:0001229;4.07e-15;7!UBERON:0000947;2.34e-11;21!UBERON:0010191;2.34e-11;21!UBERON:0004237;6.94e-11;10!UBERON:0004695;6.94e-11;10!UBERON:0002111;6.94e-11;10!UBERON:0004178;6.94e-11;10!UBERON:0001225;3.13e-09;12!UBERON:0008987;3.13e-09;12!UBERON:0004573;9.50e-08;33!UBERON:0004571;9.50e-08;33!UBERON:0002385;1.04e-07;31!UBERON:0001015;1.04e-07;31!UBERON:0000383;1.04e-07;31!UBERON:0004797;1.31e-07;4!UBERON:0000415;1.31e-07;4!UBERON:0007240;1.31e-07;4!UBERON:0005742;1.31e-07;4!UBERON:0005734;1.31e-07;4!UBERON:0004664;1.31e-07;4!UBERON:0004663;1.31e-07;4!UBERON:0001135;1.44e-07;15!UBERON:0001851;1.44e-07;15!UBERON:0006555;1.44e-07;15!UBERON:0000353;1.44e-07;15!UBERON:0004819;1.44e-07;15!UBERON:0001285;1.44e-07;15!UBERON:0007684;1.44e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.79e-15,7;UBERON:0000074,3.79e-15,7;UBERON:0001229,3.79e-15,7;UBERON:0001230,3.79e-15,7;UBERON:0003220,3.79e-15,7;UBERON:0005749,3.79e-15,7;UBERON:0004199,3.79e-15,7;UBERON:0004209,3.79e-15,7;UBERON:0004198,3.79e-15,7;UBERON:0005103,2.20e-13,8;UBERON:0000083,2.20e-13,8;UBERON:0009201,2.20e-13,8;UBERON:0006553,2.20e-13,8;UBERON:0003074,2.20e-13,8;UBERON:0003060,2.20e-13,8;UBERON:0000080,5.22e-12,9;UBERON:0002120,5.22e-12,9;UBERON:0004875,5.22e-12,9;UBERON:0005721,5.22e-12,9;UBERON:0005754,5.22e-12,9;UBERON:0007297,5.22e-12,9;UBERON:0000947,2.26e-11,21;UBERON:0010191,2.26e-11,21;UBERON:0004237,6.61e-11,10;UBERON:0004695,6.61e-11,10;UBERON:0002111,6.61e-11,10;UBERON:0004178,6.61e-11,10;UBERON:0003914,2.10e-10,117;UBERON:0004876,5.29e-10,11;UBERON:0001225,3.01e-09,12;UBERON:0008987,3.01e-09,12;UBERON:0003887,3.01e-09,12;UBERON:0007503,3.59e-08,78;UBERON:0004872,1.04e-07,83;UBERON:0000415,1.31e-07,4;UBERON:0007240,1.31e-07,4;UBERON:0005742,1.31e-07,4;UBERON:0005734,1.31e-07,4;UBERON:0004664,1.31e-07,4;UBERON:0004663,1.31e-07,4;UBERON:0001135,1.40e-07,15;UBERON:0001851,1.40e-07,15;UBERON:0004211,1.40e-07,15;UBERON:0009773,1.40e-07,15;UBERON:0000353,1.40e-07,15;UBERON:0001231,1.40e-07,15;UBERON:0001285,1.40e-07,15;UBERON:0007684,1.40e-07,15;UBERON:0004208,1.40e-07,15;UBERON:0004573,1.81e-07,33;UBERON:0004571,1.81e-07,33;UBERON:0007500,3.50e-07,59;UBERON:0001981,3.50e-07,59;UBERON:0004537,3.50e-07,59;UBERON:0006965,3.50e-07,59;UBERON:0006555,3.66e-07,16;UBERON:0004819,3.66e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0,4.76673050927588,0.860509862246441,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0.451199612907412,0,0,0,0,1.13733384070897,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.69647365264322,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.268733889946905,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0,0.415440338029185,0,0.77380195455795,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0.554805861502613,0,0.50313580350515,0,0,0,0.466311601748341,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0.673498977531838,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.552317850755522,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0.231051332300676,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0.078493092850514,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0.169927114687817,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0.0636471582781649,0.404234377916439,0,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:3969608..3969636,+ | |||
}} |
Revision as of 20:34, 20 January 2014
Short description: | p@chr19:3969608..3969636, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:3969608..3969636, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 8.98e-21 | 5 |
glomerular cell | 3.79e-15 | 7 |
kidney corpuscule cell | 3.79e-15 | 7 |
aortic smooth muscle cell | 6.61e-11 | 10 |
kidney cortical cell | 3.01e-09 | 12 |
renal cortical epithelial cell | 3.01e-09 | 12 |
fibroblast of tunica adventitia of artery | 1.31e-07 | 4 |
fibroblast of the aortic adventitia | 1.31e-07 | 4 |
epithelial cell of nephron | 1.40e-07 | 15 |
endothelial cell | 7.08e-07 | 36 |
kidney cell | 8.59e-07 | 17 |
kidney epithelial cell | 8.59e-07 | 17 |