FFCP PHASE1:Hg19::chr19:13947099..13947104,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=284454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_036515_5end | |||
|coexpression_cluster_id=C2235 | |||
|description=CAGE_peak_1_at_LOC284454_5end | |||
|id=chr19:13947099..13947104,- | |||
|ontology_enrichment_celltype=CL:0000860!2.75e-21!45;CL:0002057!6.93e-21!42;CL:0000766!3.19e-17!76;CL:0000839!4.00e-17!70;CL:0000557!1.48e-16!71;CL:0002194!2.02e-16!63;CL:0000576!2.02e-16!63;CL:0000040!2.02e-16!63;CL:0000559!2.02e-16!63;CL:0002009!2.92e-15!65;CL:0000063!2.65e-12!578;CL:0002087!1.67e-08!119;CL:0000134!3.00e-08!358;CL:0002031!5.22e-08!124;CL:0000763!5.93e-08!112;CL:0000049!5.93e-08!112;CL:0000738!8.71e-08!140;CL:0002320!1.58e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.97e-45;33!CL:0002057;4.97e-45;33!CL:0000473;9.39e-31;39!CL:0000234;9.39e-31;39!CL:0000576;1.45e-23;48!CL:0000766;9.38e-20;69!CL:0000097;2.90e-09;5!CL:0000763;1.64e-08;100!CL:0002087;7.02e-08;104!CL:0002541;5.82e-07;3!CL:0000767;7.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.71e-42,42;CL:0002057,1.71e-42,42;CL:0000473,1.55e-36,48;CL:0000234,1.55e-36,48;CL:0000766,5.14e-36,72;CL:0000839,1.88e-33,66;CL:0000557,7.13e-33,67;CL:0002194,3.34e-28,59;CL:0000576,3.34e-28,59;CL:0000040,3.34e-28,59;CL:0000559,3.34e-28,59;CL:0002009,3.97e-27,61;CL:0000763,4.73e-22,108;CL:0000049,4.73e-22,108;CL:0000738,2.37e-19,136;CL:0002031,1.71e-17,120;CL:0002087,5.26e-15,115;CL:0000988,1.39e-14,177;CL:0000037,1.90e-14,168;CL:0002032,4.70e-14,161;CL:0000837,4.70e-14,161;CL:0000134,1.13e-12,354;CL:0002320,2.92e-12,361;CL:0000219,8.23e-11,386;CL:0000097,2.99e-09,5;CL:0002028,2.99e-09,5;CL:0000048,4.89e-09,427;CL:0000723,8.59e-09,433;CL:0000034,1.78e-08,441;CL:0000767,6.01e-07,3;CL:0002541,6.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-32;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!7.96e-17!101;UBERON:0001434!7.96e-17!101;UBERON:0001474!8.93e-17!86;UBERON:0002371!2.35e-16!80;UBERON:0002390!4.66e-16!102;UBERON:0003061!4.66e-16!102;UBERON:0002193!2.14e-15!112;UBERON:0002405!3.77e-11!115;UBERON:0002384!2.03e-07!375;UBERON:0002204!3.27e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.82e-07;3!UBERON:0000920;5.82e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.08e-31,76;UBERON:0001474,8.08e-31,82;UBERON:0004765,1.47e-27,90;UBERON:0001434,2.89e-26,100;UBERON:0002390,8.58e-25,98;UBERON:0003061,8.58e-25,98;UBERON:0002405,2.97e-24,93;UBERON:0002193,6.02e-22,108;UBERON:0002204,1.73e-14,167;UBERON:0002384,1.06e-11,371;UBERON:0003081,8.20e-11,203;UBERON:0000920,6.37e-07,3 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0.627713197974014,0.152826811495903,0.164201178899891,0.0787107813136792,0.786728553697808,1.91914699048606,2.01260960310899,0,0.30120591877825,0.369754010166788,0,0,0.880801318004542,0.553995408531877,0,2.82114131930607,0.223915474239924,0,0,1.30858414901608,0.377875943688809,0.727752183563449,2.09186133215116,2.87817521615278,3.40677007984614,2.58923153089935,2.81776777182011,1.41889337933151,2.41321976515633,2.5819387343353,6.77132432971709,2.82363509313907,0.272906150057846,2.47195832889593,1.83650335422542,2.24650318953266,1.91801137739712,0.989553900560148,0.398927315243264,0.852449501065388,0.580418477257168,0.56738522469114,0.622822248995575,1.00499466102697,1.5644487552606,2.6062661364614,0.605399502633369,1.10483290796269,2.21523671208619,0.422510572623884,0.212604299965044,0.419317291016752,0.336985893439485,0.750884464207532,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0.560508562981536,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.724122019413995,0,0,0,0,0,0.869079113764942,0,0,0.283604451492204,0.665188192387692,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0.24406205754817,0,0,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.993943903390637,0.25326102332916,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0.438977620880838,0.612975591598039,0.600952235626387,0.226864366320042,0.717558542755448,0,0,0,0.103052529238439,0.515281080091258,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0,0,1.06502877754984,0.201504196455281,0.508681776931463,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,0,0,0,1.39310378409594,0,0.354920400119532,0.505754070234305,0.482022059766964,0.220587945464788,0.435758888184812,0.237270619111097,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.171567810298526,0.109750285408626,0,0.402115889646523,0.277765335475589,0,0,0,0.231860809950154,0,0.288732895522148,0,0.570762456703795,0,0,0.246217006087397,0.468008530278475,0.148631162288728,0,0.335964256397719,0.283550194484773,0.179117045405697,0.581267877027924,0,0,0.616339038092582,4.14656231081544,9.51191692551945,3.02981840223312,0.380987365753014,0.381988425558278,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,0.868687840005475,0.410952645100767,0.537182889719687,0,0.591092280605782,1.2937654491571,0.898401253958239,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0.415941723061614,0.892144943985809,0.315404830067869,0.117141414992713,0,0,0,0,0,0.521301686808497,0,0,0.620304078368662,0.862856803274467,1.38745825144478,0,0,0.604780586659361,0.744323423456331,1.2276957863045,1.12264037773229,0.640695746278505,0,1.76939313257968,1.48418066444991,0,0,0.164254312027618,0,0,0,0.601519410909855,0.644566922551274,0.34444334449382,0,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0.769350375349168,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.41254749960294,0.574265537996172,0.650060246036521,1.6068392984416,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.170453254832202,0.0890320356467374,0.330569830721956,0.192190067365106,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,1.05553817648832,0.658589785919804,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,0,0.476463550915578,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0.37428108081644,0,0,0.445773537109913,0.284136146806413,0.23874448473769,0.296964680832639,0.921482106297696,0,0,0,0.329607748453519,0,0,0,0,0.102268682502155,0,0.311039587661807,0.269605053441981,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0.0769502585037971,0.455768223388005,0,0,0.217294743844016,1.27600463892768,0.274792780205587,3.73124343213044,0,0.156980256395025,0,0,0,0,0.569261198172555,0,0,0.816164040795739,0,0,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0.19566461893209,0.485560759068186,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.174118413160805,0,0.343972064943233,0.387025325156341,0.365446585430928,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.39961921916426,0,0,0,0.14405479798815,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0.670869375198532,0,0.0524545881349981,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0.326587360109409,0,0.164185041498678,0.170388021785422,0.453248366080503,0.146552233678082,0,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0.197611631897944,0,1.27668251554036,0,0.7520696820681,0.306345576763462,0,0.157054096250234,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,1.42732666772484,0,0,0,0.597019211547496,0.467426619694449,0,1.32582103692562,0.251567901752575,0.889811221596536,0.686520205190771,0.604923695052956,0.621748802331122,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0.761610424337591,0,0.181848659202559,0.644463342254931,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0.260994291965212,0.226705925512272,0.231522474323834,0,0.537266523244462,0,0.657852148736121,0.353378291891762,0.38582807654183,0.337884881306145,0,0.690860683462397,0.607719912354764,0,0,0,0,0,0,0.211312123358627,0,0.213383459388282,0.172214979660816,0,0,0,0,0,0,0,0,0.678930119816101,0,0.371807292777007,0,0.636008701306837,0,0,1.76337971845342,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0.687034029507179,0.353909170043221,0.183428598521679,0.231051332300676,0,0,0.795664888465099,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0.206686796501184,0.126831620387814,0,0,0,0.175871244359621,0.511049710558381,0,0,0,0,0.177404740325278,0,0.514464028312255,0.135939465953663,0,0.236387681767936,0.222462803784138,0.078493092850514,0,0,0,0.215927591218621,0.47775168788705,0.357382720883282,0,0.348724276104376,0,0,0.207216164163037,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,0.335566295393377,0.098150233615243,0.487671699929078,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0.490296643507811,0,0.196308467114945,0.297046400327086,0,0,0,0.0644578879735772,0.199882311849858,0,0,0.240724100067505,0,0,0.573358332605805,0.157771562193185,0,0,0,0.743990036333503,0.462175628631418,1.29787968637137,0,0.109265571963696,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0.124149428591716,0.448527450322454,0,0.404234377916439,0.653150243690884,0,0.202056159043763,0.0717222053926763,0.332660356546013,0.0814032686109745,1.17400080465487,0,0.179650404213174,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p1@LOC284454 | |||
}} |
Revision as of 21:41, 20 January 2014
Short description: | p1@LOC284454 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC284454_5end |
Coexpression cluster: | C2235_Mast_CD14_Basophils_immature_Neutrophils_Monocytederived_mature |
Association with transcript: | 0bp_to_NR_036515_5end |
EntrezGene: | LOC284454 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.08e-31 | 76 |
bone element | 8.08e-31 | 82 |
skeletal element | 1.47e-27 | 90 |
skeletal system | 2.89e-26 | 100 |
hematopoietic system | 8.58e-25 | 98 |
blood island | 8.58e-25 | 98 |
immune system | 2.97e-24 | 93 |
hemolymphoid system | 6.02e-22 | 108 |
musculoskeletal system | 1.73e-14 | 167 |
connective tissue | 1.06e-11 | 371 |
lateral plate mesoderm | 8.20e-11 | 203 |
egg chorion | 6.37e-07 | 3 |