FFCP PHASE1:Hg19::chr2:118771594..118771685,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25611 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_uc002tlj.2,uc010fld.1_5end | |||
|coexpression_cluster_id=C999 | |||
|description=CAGE_peak_1_at_CCDC93_5end | |||
|id=chr2:118771594..118771685,- | |||
|ontology_enrichment_celltype=CL:0000738!3.96e-48!140;CL:0000037!6.53e-42!172;CL:0000566!6.53e-42!172;CL:0002032!1.33e-38!165;CL:0000837!1.33e-38!165;CL:0000988!6.74e-38!182;CL:0002087!1.48e-37!119;CL:0002031!2.18e-36!124;CL:0000766!1.62e-30!76;CL:0000557!2.47e-27!71;CL:0000763!2.10e-25!112;CL:0000049!2.10e-25!112;CL:0002009!2.70e-25!65;CL:0002057!6.97e-25!42;CL:0002194!2.77e-24!63;CL:0000576!2.77e-24!63;CL:0000040!2.77e-24!63;CL:0000559!2.77e-24!63;CL:0000839!1.42e-23!70;CL:0000860!8.05e-22!45;CL:0000134!3.02e-12!358;CL:0000542!8.06e-12!53;CL:0000051!8.06e-12!53;CL:0000838!1.13e-11!52;CL:0002320!2.02e-10!365;CL:0000791!9.03e-09!18;CL:0000789!9.03e-09!18;CL:0002420!9.03e-09!18;CL:0002419!9.03e-09!18;CL:0000790!9.03e-09!18;CL:0000219!1.80e-08!390;CL:0000084!1.28e-07!25;CL:0000827!1.28e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-19;33!CL:0002057;1.33e-19;33!CL:0000473;1.43e-17;39!CL:0000234;1.43e-17;39!CL:0000576;7.05e-16;48!CL:0000766;4.98e-14;69!CL:0002087;1.96e-11;104!CL:0000738;6.04e-11;136!CL:0000791;9.26e-09;18!CL:0000789;9.26e-09;18!CL:0002419;9.26e-09;18!CL:0000763;3.32e-08;100!CL:0000988;1.06e-07;177!CL:0000084;1.17e-07;25!CL:0000542;1.87e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.65e-50,136;CL:0000037,9.98e-44,168;CL:0002032,2.27e-40,161;CL:0000837,2.27e-40,161;CL:0000988,3.38e-40,177;CL:0002087,8.26e-40,115;CL:0002031,1.63e-38,120;CL:0000766,2.74e-33,72;CL:0000557,5.08e-30,67;CL:0002009,5.16e-28,61;CL:0000763,3.67e-27,108;CL:0000049,3.67e-27,108;CL:0002194,5.50e-27,59;CL:0000576,5.50e-27,59;CL:0000040,5.50e-27,59;CL:0000559,5.50e-27,59;CL:0000473,3.52e-26,48;CL:0000234,3.52e-26,48;CL:0000839,5.43e-26,66;CL:0000860,6.97e-25,42;CL:0002057,6.97e-25,42;CL:0000134,4.83e-13,354;CL:0000542,8.06e-12,53;CL:0000051,8.06e-12,53;CL:0000838,1.13e-11,52;CL:0002320,3.86e-11,361;CL:0000219,4.31e-09,386;CL:0000791,9.03e-09,18;CL:0000789,9.03e-09,18;CL:0002420,9.03e-09,18;CL:0002419,9.03e-09,18;CL:0000790,9.03e-09,18;CL:0000084,1.28e-07,25;CL:0000827,1.28e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-18;42!CL:0000790;9.26e-09;18!CL:0000049;3.66e-08;108!CL:0000051;1.87e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.77e-29!102;UBERON:0003061!6.77e-29!102;UBERON:0002193!1.17e-26!112;UBERON:0002371!3.08e-22!80;UBERON:0001474!4.28e-21!86;UBERON:0004765!3.39e-18!101;UBERON:0001434!3.39e-18!101;UBERON:0002405!3.18e-17!115;UBERON:0002384!4.54e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.53e-31,98;UBERON:0003061,5.53e-31,98;UBERON:0002193,1.76e-28,108;UBERON:0002371,2.62e-24,76;UBERON:0002405,1.30e-23,93;UBERON:0001474,5.70e-23,82;UBERON:0004765,2.23e-19,90;UBERON:0001434,6.81e-18,100;UBERON:0002384,9.09e-11,371 | |||
|phase1_expression=13.0808433074801,13.4883330051319,10.9944435194858,5.00366491765652,12.9618717383913,10.4680622892044,7.59899634504932,8.84407822797563,8.35794010239483,9.33788958705734,4.88460817580699,10.4851858622483,6.33040747748289,6.18831764800233,9.94192127183747,10.0848771967766,7.23233433628772,7.30310090387373,7.3189919818576,8.61847406537515,6.32402142857184,1.88072832886853,16.8879232407323,12.1818238314867,13.5586050762387,18.5684575967522,16.9127214266888,18.2609012647736,62.5449200189757,95.1896907281087,73.0732102051879,7.35536979583142,6.024118375565,6.28581817283539,22.4654881682875,18.6241694558522,17.0288254814211,118.00102201729,114.711423952921,92.229620054237,50.8288126524628,31.417685603841,57.4393515824236,90.5831027596688,104.6716364018,104.068562249573,159.911177391111,148.431607575879,152.375534480391,102.99387645133,102.976604024698,111.619612507412,193.402326893243,144.588569122777,142.197810924059,126.687094512173,133.451107378287,128.541833102588,170.488728050593,158.859868402666,155.998258694966,73.8866912418244,82.1790269401123,65.2123868315022,201.695420846866,200.286984315972,163.179429236841,95.4744927975624,95.9528569893171,102.947512390225,154.376873171509,189.294704897608,172.472001155282,34.6458669551585,34.4418965943371,29.7715276621894,33.361603450509,27.9329020685202,33.7523732063868,29.0712998616074,26.6548347446781,28.3129438335183,35.1992488922645,36.0451483433007,28.4642961236338,43.0997524792172,36.8364308073131,42.5316805566318,43.6289616038009,41.978365199556,91.6432880266212,136.239027934058,141.058821178209,35.686258716337,102.01255846264,14.2227405778542,74.9464224133704,68.3838727183547,64.3532691868464,28.0873312256339,52.1475626613745,46.8713327677386,42.8618802497405,24.7331214285085,34.4688911745559,35.2238892387958,35.7461100169821,25.1058986662323,24.1910386461374,23.1857445491183,18.7918012094377,32.7477486880609,47.3034136486973,43.0740733224438,31.360657141493,28.8938823878794,42.9206952834152,30.5828426479541,42.254288567257,37.5907188902434,35.809589962103,27.5631092890028,42.6127586990097,43.7714210148111,34.9806034346568,26.9926067330179,26.2760959014735,83.4651916950392,88.2552646085574,63.8675621123144,2.43806866313962,8.71911117614727,6.26526553033299,15.9033227049209,9.02408239144601,11.5877215168659,25.4491503056352,24.3317435151318,14.2747573917742,10.4212816807405,11.2428525687201,16.5033635127118,1.45718115317017,2.96627554227544,38.2965924512526,44.7513424859117,36.2975232216502,70.5932247943812,70.9273689367359,75.4058727699017,12.3232692567357,18.0649264972286,9.02565304179745,11.8714667804042,7.55098985177831,11.2798397195428,11.2857281929878,18.864423419361,19.5671444477691,32.1331788254083,9.66790361061953,12.1643536914962,9.27435818683044,19.8538063386769,6.48113558305408,17.5027467436796,14.594409220701,15.6529957871818,12.2653309972707,7.59412527654503,9.34328894045077,125.19139656426,135.723092451914,4.36094052142534,11.9273268406876,16.2087054930662,27.6735187899627,31.2651916616207,14.5414036701326,6.72813120170769,12.8098794875646,6.90669135568048,14.0044965929895,17.3776766969898,14.2211855708709,10.2923050798553,5.18558332031999,5.85803579584492,7.49184184392769,7.41613368007784,7.17353666648645,14.6793123304706,15.5398026593406,15.3091379305451,11.8409419327838,9.9495797022532,9.81594921169772,20.1960485737949,17.8032189080561,4.55080680969013,2.87447256726495,12.1202002046928,12.7620890269403,14.4073340051775,16.6811495934718,13.7919508109559,20.131899893484,8.6208459201616,35.5191478663947,14.5219024396626,15.8948925869671,36.0109315301283,24.9387120757022,32.7203485857949,13.2142967995429,24.1350155105011,19.1950900167561,35.5931621684201,18.5020296271022,17.2961280796129,22.0105947360301,13.2992769660485,11.5301202771132,14.1080422809207,21.5469435266759,15.4874481510062,3.90315859614705,7.28913725768169,5.46111531486736,7.15261279606056,8.32658807889574,6.20461510428911,18.7739438795779,7.71889125831462,5.52539685409922,13.9310378409594,7.21879481669586,6.7434876022711,8.76640388406129,5.78426471720357,9.0441057640563,7.40790109914181,8.30447166888838,8.89886633857085,8.43752300038988,8.0796902958742,9.59602091012043,2.80483547606892,2.4694440679884,1.47008711385542,21.5483559197112,12.7767538168091,18.9052770138049,36.1999741520013,11.1919479074233,10.122500807613,8.34102169105554,4.49607013030478,14.7777589445097,9.81437518680414,4.56131627434455,6.23960871167747,7.21656710126366,14.4913006218846,8.92306076192245,15.8803092537181,8.33373922637899,15.4105863310025,4.74122638775565,7.72637545885385,59.8307324792375,41.6527591947843,44.292086362041,15.9347517777521,18.6460162300734,22.4004653642971,14.15024658705,12.2066254175864,5.75074018747817,49.7589870274903,25.7981911658752,26.3306706736781,23.0591925467138,29.4144869883465,16.0649672559188,6.49380323449072,7.03304683260282,3.4214489204541,8.53468189437585,7.80891950394185,6.28818151787272,17.2681869891856,17.0024426844979,18.4812480268794,21.20056138427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| |||
|short_description=p1@CCDC93 | |||
}} |
Revision as of 05:09, 21 January 2014
Short description: | p1@CCDC93 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC93_5end |
Coexpression cluster: | C999_CD14_Eosinophils_Mast_Neutrophils_CD19_CD8_CD4 |
Association with transcript: | 11bp_to_uc002tlj.2, uc010fld.1_5end |
EntrezGene: | CCDC93 |
HGNC: | 25611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.53e-31 | 98 |
blood island | 5.53e-31 | 98 |
hemolymphoid system | 1.76e-28 | 108 |
bone marrow | 2.62e-24 | 76 |
immune system | 1.30e-23 | 93 |
bone element | 5.70e-23 | 82 |
skeletal element | 2.23e-19 | 90 |
skeletal system | 6.81e-18 | 100 |
connective tissue | 9.09e-11 | 371 |