FFCP PHASE1:Hg19::chr20:9494967..9494972,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=24141 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16097 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJQ1 | |||
|association_with_transcript=-32bp_to_NM_001199897,NM_012261_5end | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_16_at_LAMP5_5end | |||
|id=chr20:9494967..9494972,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;7.05e-34;1!UBERON:0010122;7.05e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000369;2.28e-74;4!UBERON:0002435;2.28e-74;4!UBERON:0000204;2.28e-74;4!UBERON:0000349;2.22e-59;5!UBERON:0002420;1.08e-58;9!UBERON:0007245;1.08e-58;9!UBERON:0010009;1.08e-58;9!UBERON:0010011;1.08e-58;9!UBERON:0000454;1.08e-58;9!UBERON:0005383;5.59e-45;3!UBERON:0005382;5.59e-45;3!UBERON:0009663;5.61e-43;7!UBERON:0001874;1.84e-34;1!UBERON:0001882;7.05e-34;1!UBERON:0005403;7.05e-34;1!UBERON:0000125;1.17e-33;9!UBERON:0002308;1.17e-33;9!UBERON:0002791;6.16e-26;32!UBERON:0002780;4.69e-25;41!UBERON:0001890;4.69e-25;41!UBERON:0001869;5.48e-24;32!UBERON:0003528;5.04e-23;34!UBERON:0002020;5.04e-23;34!UBERON:0001893;1.58e-21;34!UBERON:0000073;4.73e-18;53!UBERON:0002616;4.73e-18;53!UBERON:0001873;7.05e-18;2!UBERON:0001954;7.05e-18;2!UBERON:0003022;7.05e-18;2!UBERON:0002421;7.05e-18;2!UBERON:0002600;7.05e-18;2!UBERON:0001876;1.07e-17;2!UBERON:0000955;1.49e-11;68!UBERON:0001017;3.33e-09;75!UBERON:0001016;4.26e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.56e-74,4;UBERON:0002435,1.56e-74,4;UBERON:0000204,1.56e-74,4;UBERON:0010082,1.56e-74,4;UBERON:0000349,2.01e-59,5;UBERON:0002420,8.65e-59,9;UBERON:0007245,8.65e-59,9;UBERON:0010009,8.65e-59,9;UBERON:0010011,8.65e-59,9;UBERON:0000454,8.65e-59,9;UBERON:0005383,5.00e-45,3;UBERON:0005382,5.00e-45,3;UBERON:0009663,4.53e-43,7;UBERON:0001874,1.84e-34,1;UBERON:0001882,5.05e-34,1;UBERON:0005403,5.05e-34,1;UBERON:0000125,9.92e-34,9;UBERON:0002308,9.92e-34,9;UBERON:0002780,1.39e-28,41;UBERON:0001890,1.39e-28,41;UBERON:0003080,1.39e-28,41;UBERON:0006240,1.39e-28,41;UBERON:0002791,1.99e-25,32;UBERON:0001869,1.99e-25,32;UBERON:0003528,5.19e-24,34;UBERON:0002020,5.19e-24,34;UBERON:0001893,5.19e-24,34;UBERON:0000073,2.29e-22,53;UBERON:0002616,2.29e-22,53;UBERON:0001049,3.21e-21,56;UBERON:0005068,3.21e-21,56;UBERON:0006241,3.21e-21,56;UBERON:0007135,3.21e-21,56;UBERON:0003056,1.49e-19,61;UBERON:0001873,6.48e-18,2;UBERON:0010122,6.48e-18,2;UBERON:0001954,7.67e-18,2;UBERON:0003022,7.67e-18,2;UBERON:0002421,7.67e-18,2;UBERON:0002600,7.67e-18,2;UBERON:0001876,1.07e-17,2;UBERON:0000955,2.22e-17,68;UBERON:0006238,2.22e-17,68;UBERON:0001017,9.81e-15,81;UBERON:0003075,9.81e-15,82;UBERON:0007284,9.81e-15,82;UBERON:0002346,4.44e-14,86;UBERON:0001016,2.44e-13,89;UBERON:0010371,9.68e-12,104;UBERON:0007023,7.60e-11,114;UBERON:0010314,2.38e-09,132;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
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|short_description=p16@LAMP5 | |||
}} |
Revision as of 10:13, 21 January 2014
Short description: | p16@LAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LAMP5_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -32bp_to_NM_001199897, NM_012261_5end |
EntrezGene: | LAMP5 |
HGNC: | 16097 |
UniProt: | Q9UJQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data