FFCP PHASE1:Hg19::chr21:45287096..45287111,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=326 | |||
|TSSclassifier=strong | |||
|UniProt=C9JQX8 | |||
|association_with_transcript=-11bp_to_ENST00000448287_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_5_at_AGPAT3_5end | |||
|id=chr21:45287096..45287111,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.24e-10!12;CL:0000417!2.24e-10!12;CL:0000668!2.24e-10!12;CL:0000414!2.24e-10!12;CL:0000412!2.24e-10!12;CL:0000182!2.24e-10!12;CL:0000223!2.62e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.70e-21;12!CL:0002563;1.03e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.51e-21,12;CL:0000223,2.33e-08,58;CL:0002563,9.46e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.34e-22;11!UBERON:0009497;4.73e-19;13!UBERON:0003104;1.57e-16;31!UBERON:0006242;5.24e-08;1!UBERON:0005425;5.24e-08;1 | |||
|ontology_enrichment_disease=DOID:3119!3.07e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1799;5.24e-08;1!DOID:10165;5.24e-08;1!DOID:1798;5.24e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,7.16e-08,1;DOID:10165,7.16e-08,1;DOID:1798,7.16e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!6.29e-17!35;UBERON:0009854!4.46e-14!23;UBERON:0000160!3.75e-13!27;UBERON:0009497!7.80e-13!25;UBERON:0000015!7.80e-13!25;UBERON:0002423!7.80e-13!25;UBERON:0006235!7.80e-13!25;UBERON:0004161!7.80e-13!25;UBERON:0004921!8.05e-13!129;UBERON:0004185!8.05e-13!129;UBERON:0008835!1.63e-12!22;UBERON:0003894!1.63e-12!22;UBERON:0009856!4.14e-12!26;UBERON:0001007!6.80e-11!155;UBERON:0001555!6.80e-11!155;UBERON:0007026!6.80e-11!155;UBERON:0007499!1.07e-10!25;UBERON:0005057!2.23e-10!26;UBERON:0002107!3.40e-10!19;UBERON:0006925!3.40e-10!19;UBERON:0008836!3.40e-10!19;UBERON:0003929!8.35e-10!54;UBERON:0004119!2.81e-09!169;UBERON:0000925!2.81e-09!169;UBERON:0006595!2.81e-09!169;UBERON:0005172!2.84e-08!55;UBERON:0005173!2.84e-08!55;UBERON:0000059!2.91e-08!11;UBERON:0001155!2.82e-07!9;UBERON:0000077!3.21e-07!130;UBERON:0002417!4.36e-07!61;UBERON:0000916!4.36e-07!61;UBERON:0000949!4.86e-07!45;UBERON:0002368!5.09e-07!35;UBERON:0002365!8.50e-07!31;UBERON:0002330!8.50e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.42e-23;17!UBERON:0002107;6.19e-23;19!UBERON:0006925;6.19e-23;19!UBERON:0002423;1.57e-21;25!UBERON:0005409;3.25e-18;22!UBERON:0002108;2.36e-13;4!UBERON:0002365;3.89e-13;31!UBERON:0002330;3.89e-13;31!UBERON:0002368;1.38e-11;33!UBERON:0001007;7.05e-11;81!UBERON:0004921;1.08e-10;33!UBERON:0000949;1.85e-10;43!UBERON:0000059;3.21e-10;11!UBERON:0005172;2.38e-08;52!UBERON:0005173;2.38e-08;52!UBERON:0000941;5.24e-08;1!UBERON:0001785;5.24e-08;1!UBERON:0002464;5.24e-08;1!UBERON:0004904;5.24e-08;1!UBERON:0001021;5.24e-08;1!UBERON:0001242;1.03e-07;4!UBERON:0001262;1.03e-07;4!UBERON:0004786;1.03e-07;4!UBERON:0004808;1.03e-07;4!UBERON:0001277;1.03e-07;4!UBERON:0001052;1.33e-07;4!UBERON:0001155;1.67e-07;9!UBERON:0002417;2.06e-07;58!UBERON:0000916;2.06e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.20e-23,17;UBERON:0002107,5.84e-23,19;UBERON:0006925,5.84e-23,19;UBERON:0008836,5.84e-23,19;UBERON:0009497,1.63e-21,25;UBERON:0000015,1.63e-21,25;UBERON:0002423,1.63e-21,25;UBERON:0006235,1.63e-21,25;UBERON:0004161,1.63e-21,25;UBERON:0005409,3.63e-20,25;UBERON:0008835,1.12e-19,22;UBERON:0003894,1.12e-19,22;UBERON:0009854,9.00e-19,23;UBERON:0007499,3.52e-17,25;UBERON:0009856,1.78e-16,26;UBERON:0003929,9.19e-14,54;UBERON:0004921,1.08e-13,118;UBERON:0005172,1.09e-13,54;UBERON:0005173,1.09e-13,54;UBERON:0002365,1.24e-13,31;UBERON:0002330,1.24e-13,31;UBERON:0002108,2.36e-13,4;UBERON:0002417,4.01e-12,60;UBERON:0000916,4.01e-12,60;UBERON:0001007,5.58e-12,145;UBERON:0001555,5.58e-12,145;UBERON:0007026,5.58e-12,145;UBERON:0002368,6.06e-12,35;UBERON:0000949,2.58e-11,45;UBERON:0004119,1.56e-10,160;UBERON:0000925,1.56e-10,160;UBERON:0006595,1.56e-10,160;UBERON:0000059,2.74e-10,11;UBERON:0005911,2.13e-08,82;UBERON:0000941,5.07e-08,1;UBERON:0001785,5.07e-08,1;UBERON:0002464,5.07e-08,1;UBERON:0004904,5.07e-08,1;UBERON:0001021,5.07e-08,1;UBERON:0003902,5.07e-08,1;UBERON:0005425,5.07e-08,1;UBERON:0001242,9.46e-08,4;UBERON:0001262,9.46e-08,4;UBERON:0004786,9.46e-08,4;UBERON:0004808,9.46e-08,4;UBERON:0001277,9.46e-08,4;UBERON:0005177,1.07e-07,101;UBERON:0001052,1.08e-07,4;UBERON:0001155,1.53e-07,9;UBERON:0011216,2.04e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,0,0,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.0834566161479,3.9313088667105,16.5421173870793,0,3.32068784066407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7162652113631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.50852387845469,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.640276590135727,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.718061155278177,1.84700532267414,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83758992864123,0,0.995261931078505,12.2071439014608,4.888241159469,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,1.06726497369676,0,0.72045208577053,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,8.50858368918015,8.15916997973548,8.29063589406474,0.0984274815147488,0,0,0,0,0,0,0,0.77380195455795,0,0,0.551639951094387,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8276412372329,7.95041333473328,0,0,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,1.04762677792569,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,1.68163297988273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0.294450700845729,1.34109717480496,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,21.5315901121166,7.6495846176385,2.35158648180761,0,0,0,0,0,0,0,0,1.39917618294901,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,3.7031878836078,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0.267964130156178,0,0,0,0,0.452122368852043,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p5@AGPAT3 | |||
}} |
Revision as of 14:06, 21 January 2014
Short description: | p5@AGPAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AGPAT3_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -11bp_to_ENST00000448287_5end |
EntrezGene: | AGPAT3 |
HGNC: | 326 |
UniProt: | C9JQX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.51e-21 | 12 |
endodermal cell | 2.33e-08 | 58 |
intestinal epithelial cell | 9.46e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 7.16e-08 | 1 |
endocrine pancreas cancer | 7.16e-08 | 1 |
pancreatic endocrine carcinoma | 7.16e-08 | 1 |