FFCP PHASE1:Hg19::chr3:5229456..5229471,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9695 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18967 | |||
|TSSclassifier=strong | |||
|UniProt=F8WE67 | |||
|association_with_transcript=7bp_to_ENST00000443790_5end | |||
|coexpression_cluster_id=C2743 | |||
|description=CAGE_peak_7_at_EDEM1_5end | |||
|id=chr3:5229456..5229471,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.51e-38!140;CL:0000037!1.15e-35!172;CL:0000566!1.15e-35!172;CL:0000988!5.64e-35!182;CL:0002032!1.02e-31!165;CL:0000837!1.02e-31!165;CL:0002087!2.67e-27!119;CL:0002031!3.33e-27!124;CL:0000766!8.64e-23!76;CL:0000763!2.70e-22!112;CL:0000049!2.70e-22!112;CL:0000557!2.32e-21!71;CL:0002057!1.24e-20!42;CL:0000860!4.68e-19!45;CL:0002009!5.58e-19!65;CL:0000839!4.51e-18!70;CL:0002194!1.01e-17!63;CL:0000576!1.01e-17!63;CL:0000040!1.01e-17!63;CL:0000559!1.01e-17!63;CL:0000134!5.41e-16!358;CL:0002320!9.08e-15!365;CL:0000219!5.55e-14!390;CL:0000048!2.97e-13!430;CL:0000723!4.08e-13!436;CL:0000034!4.38e-13!444;CL:0002371!8.92e-13!591;CL:0000144!1.85e-12!625;CL:0000063!8.69e-10!578;CL:0000012!9.94e-10!682;CL:0000451!3.03e-09!10;CL:0000548!5.34e-09!679;CL:0000004!5.34e-09!679;CL:0000255!5.34e-09!679;CL:0000542!9.12e-09!53;CL:0000051!9.12e-09!53;CL:0000838!2.04e-08!52;CL:0000003!2.76e-08!722;CL:0000990!7.23e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.29e-23;33!CL:0002057;5.29e-23;33!CL:0000576;2.57e-22;48!CL:0000451;3.04e-20;10!CL:0000990;5.68e-17;8!CL:0000473;1.28e-15;39!CL:0000234;1.28e-15;39!CL:0000766;4.27e-15;69!CL:0002087;6.72e-14;104!CL:0000738;1.25e-13;136!CL:0000840;1.35e-11;5!CL:0002393;5.20e-11;6!CL:0002397;5.20e-11;6!CL:0000988;8.54e-11;177!CL:0000453;1.88e-10;5!CL:0000094;6.80e-10;8!CL:0000081;4.62e-09;11!CL:0000763;1.35e-08;100!CL:0000219;1.91e-08;193!CL:0000542;1.25e-07;53!CL:0000784;9.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.15e-65,136;CL:0000988,6.35e-60,177;CL:0000037,7.16e-59,168;CL:0002032,1.36e-51,161;CL:0000837,1.36e-51,161;CL:0002087,5.55e-46,115;CL:0002031,2.32e-43,120;CL:0000766,3.81e-42,72;CL:0000763,6.71e-40,108;CL:0000049,6.71e-40,108;CL:0002009,1.20e-38,61;CL:0000557,6.82e-38,67;CL:0000860,2.92e-36,42;CL:0002057,2.92e-36,42;CL:0002194,1.18e-35,59;CL:0000576,1.18e-35,59;CL:0000040,1.18e-35,59;CL:0000559,1.18e-35,59;CL:0000839,2.99e-32,66;CL:0000473,2.33e-30,48;CL:0000234,2.33e-30,48;CL:0000134,4.71e-21,354;CL:0000451,3.10e-20,10;CL:0002320,3.80e-20,361;CL:0000219,4.41e-19,386;CL:0000990,6.86e-17,8;CL:0000034,5.30e-16,441;CL:0000723,1.50e-15,433;CL:0000048,1.71e-15,427;CL:0002393,7.61e-12,9;CL:0002397,7.61e-12,9;CL:0000840,1.60e-11,5;CL:0001029,1.60e-11,5;CL:0000542,1.30e-10,53;CL:0000051,1.30e-10,53;CL:0000453,1.74e-10,5;CL:0000094,2.39e-10,8;CL:0000838,6.08e-10,52;CL:0000081,1.94e-09,11;CL:0000784,8.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.62e-25;42!CL:0000049;2.56e-10;108!CL:0000051;1.25e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.98e-20!102;UBERON:0003061!7.98e-20!102;UBERON:0002193!5.41e-18!112;UBERON:0002371!6.54e-18!80;UBERON:0001474!8.78e-17!86;UBERON:0002384!5.54e-14!375;UBERON:0002405!6.96e-14!115;UBERON:0004765!1.75e-13!101;UBERON:0001434!1.75e-13!101;UBERON:0002204!3.34e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-33,98;UBERON:0003061,1.33e-33,98;UBERON:0002371,1.54e-33,76;UBERON:0001474,4.59e-30,82;UBERON:0002193,5.21e-29,108;UBERON:0002405,1.13e-27,93;UBERON:0004765,1.74e-27,90;UBERON:0001434,2.40e-23,100;UBERON:0002384,6.51e-19,371;UBERON:0002204,2.27e-11,167;UBERON:0003081,6.22e-11,203 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,0,0.872338524100369,0,0,0,0,0,0.218441372130172,0.791300934685361,0.247532705920093,0,1.34465029290355,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0,1.22261449196722,1.14940825229924,0.865818594450472,1.96682138424452,1.91914699048606,2.16742572642506,0,0,0.369754010166788,1.23947520928483,0.853015394924529,1.76160263600908,6.64794490238253,10.4283112684474,7.81239134577067,0,0.647787332037959,0.257575567634187,0.872389432677388,0.755751887377619,0.970336244751265,1.39457422143411,0.411167888021826,1.54853185447552,2.3015391385772,3.33008918487831,3.78371567821736,1.03423704220986,3.22742341791913,0,0.752969358170419,2.45615535052061,1.57306439111559,1.22433556948361,0.962787081228281,0,2.96866170168044,5.18605509816243,1.27867425159808,1.7412554317715,3.40431134814684,3.11411124497787,2.51248665256743,4.17186334736161,1.73751075764093,3.02699751316684,2.20966581592539,1.89877432464531,1.26753171787165,2.33864729961548,2.51590374610051,2.47122988522289,1.20141514273205,1.28580469357664,1.71007646244749,1.59133341759272,0.730656615058536,0,0,0.889509253863555,2.13365111283254,0.400395987036012,1.14950487990897,0,0,9.10740750575117,12.9192181661607,6.49864487812889,1.32171328579026,1.12101712596307,0.263384084775077,0.393419540227666,1.17903228824749,0.822405995998037,0.334372990781356,0.32592226663359,0,0,0.557052284425868,1.47302953737419,0.886135578334485,0.541607727530031,0.640456598628376,0.520237390239513,0.493313713811028,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.339928028092699,1.14966148080576,0.34362744548263,0,0.318565414324097,0.651083453856419,0,0,0,0,0.236777252044017,0,1.00803371612366,1.06976078313403,1.88271725047639,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0.221729397462564,0.263504357079378,0.261958150995425,0,0.370784442784429,3.24547393654683,3.13433527138681,2.12732736830184,14.0709468340152,12.5838880371628,2.97166001063652,0.198762407366705,0,0,0,0,0.825354125820202,0,0.516833518338658,0,0,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0,0.337834441449967,0,0,0.549605231791222,1.31780417436063,0,0.436094052142534,0.993943903390637,0.506522046658319,0.529636723252875,0.860509862246441,0.354668382198357,0,0,0.49333509683432,0.622422070799533,0.404132016209064,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0.276149695926898,0.161646056818812,0,0.201504196455281,0,1.54608682530637,1.90922284413584,0.860413786167011,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0.514703430895577,1.42675371031213,0,0.502644862058154,0.185176890317059,0,0,0,0,0.352226082707465,0.288732895522148,0.462985512576611,0,0,0,0,0.468008530278475,0.594524649154913,0,1.17587489739202,0.850650583454319,0.985143749731331,0.581267877027924,0.383382679165211,0.985326475791887,0.880484340132261,1.24396869324463,0.576479813667846,0.75745460055828,0.190493682876507,0.381988425558278,0,0,0.411309970813294,0.300343057843917,0,0.336393253036082,0,0.1466765716419,0.775630294546667,0,0,0.531876233169741,0,0,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0,1.20575750823834,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0.895304816199478,0.336255431980582,1.18218456121156,1.2937654491571,1.79680250791648,0.254094624222463,0,0,0,0,6.74106321552464,5.9832291840805,2.90090859405225,0.12269149171914,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.234282829985426,0.300946099727719,2.27407504055985,0,0,0.184369168541703,0,0,0,0.620304078368662,3.66714141391649,4.90946765895844,0,0,0,0.496215615637554,0.460385919864187,0.561320188866147,0.512556597022804,0.511707249066704,1.12597744800525,0,0.154209693802656,0.710246901252508,0.492762936082855,1.03850885836724,0.232420756919918,0.241718899183244,2.00506470303285,0,0,0.546273504020151,0.786746489756545,0.451199612907412,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.366277859273374,0.165018999841176,1.72279661398852,0,0,0.290012154876366,0,0,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.178064071293475,0.661139661443912,1.92190067365106,0.510450849978337,0.910420027699949,0.464845549297286,0.62962469366128,0,0.924100740528266,0.532306030317022,0,0.55597265731176,0.143124886741991,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0.359744915166629,0,0.589062011728432,0.202182481573316,1.58510321173008,0,0.48763373908959,1.21856744815642,1.05650146756755,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0,0,0.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| |||
|short_description=p7@EDEM1 | |||
}} |
Revision as of 17:06, 21 January 2014
Short description: | p7@EDEM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EDEM1_5end |
Coexpression cluster: | C2743_immature_migratory_cord_CD19_CD14_Dendritic_Natural |
Association with transcript: | 7bp_to_ENST00000443790_5end |
EntrezGene: | EDEM1 |
HGNC: | 18967 |
UniProt: | F8WE67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-33 | 98 |
blood island | 1.33e-33 | 98 |
bone marrow | 1.54e-33 | 76 |
bone element | 4.59e-30 | 82 |
hemolymphoid system | 5.21e-29 | 108 |
immune system | 1.13e-27 | 93 |
skeletal element | 1.74e-27 | 90 |
skeletal system | 2.40e-23 | 100 |
connective tissue | 6.51e-19 | 371 |
musculoskeletal system | 2.27e-11 | 167 |
lateral plate mesoderm | 6.22e-11 | 203 |