FFCP PHASE1:Hg19::chr3:133292759..133292807,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55573 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26928 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000431519_5end | |||
|description=CAGE_peak_2_at_CDV3_5end | |||
|id=chr3:133292759..133292807,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.24e-21!140;CL:0000037!3.25e-19!172;CL:0000566!3.25e-19!172;CL:0002031!5.81e-18!124;CL:0002032!2.28e-17!165;CL:0000837!2.28e-17!165;CL:0002087!2.49e-17!119;CL:0000988!1.40e-16!182;CL:0002057!3.88e-11!42;CL:0000860!1.08e-10!45;CL:0000557!7.58e-10!71;CL:0000766!1.75e-09!76;CL:0000838!1.98e-09!52;CL:0000542!2.68e-09!53;CL:0000051!2.68e-09!53;CL:0000763!6.89e-09!112;CL:0000049!6.89e-09!112;CL:0000839!1.06e-08!70;CL:0002009!2.83e-08!65;CL:0002194!9.00e-08!63;CL:0000576!9.00e-08!63;CL:0000040!9.00e-08!63;CL:0000559!9.00e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.91e-13;33!CL:0002057;5.91e-13;33!CL:0000473;1.75e-09;39!CL:0000234;1.75e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.24e-21,136;CL:0000037,2.89e-19,168;CL:0002031,4.04e-18,120;CL:0002087,1.71e-17,115;CL:0002032,2.05e-17,161;CL:0000837,2.05e-17,161;CL:0000988,5.74e-17,177;CL:0000860,3.88e-11,42;CL:0002057,3.88e-11,42;CL:0000473,4.82e-10,48;CL:0000234,4.82e-10,48;CL:0000557,5.14e-10,67;CL:0000766,1.29e-09,72;CL:0000838,1.98e-09,52;CL:0000542,2.68e-09,53;CL:0000051,2.68e-09,53;CL:0000763,6.53e-09,108;CL:0000049,6.53e-09,108;CL:0000839,7.80e-09,66;CL:0002009,2.05e-08,61;CL:0002194,6.70e-08,59;CL:0000576,6.70e-08,59;CL:0000040,6.70e-08,59;CL:0000559,6.70e-08,59 | |||
|ontology_enrichment_development_v019=CL:0002057;8.08e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.51e-16!115;UBERON:0002390!1.81e-11!102;UBERON:0003061!1.81e-11!102;UBERON:0002193!3.47e-09!112;UBERON:0002371!7.28e-08!80;UBERON:0001474!5.02e-07!86;UBERON:0002780!7.28e-07!41;UBERON:0001890!7.28e-07!41;UBERON:0006240!7.28e-07!41;UBERON:0003080!7.91e-07!42;UBERON:0002619!8.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.33e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.18e-16,114;UBERON:0002390,1.45e-11,98;UBERON:0003061,1.45e-11,98;UBERON:0002193,3.25e-09,108;UBERON:0002371,6.21e-08,76;UBERON:0001474,4.66e-07,82;UBERON:0002780,7.28e-07,41;UBERON:0001890,7.28e-07,41;UBERON:0003080,7.28e-07,41;UBERON:0006240,7.28e-07,41;UBERON:0002619,8.12e-07,22 | |||
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| |||
|short_description=p2@CDV3 | |||
}} |
Revision as of 21:26, 21 January 2014
Short description: | p2@CDV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDV3_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000431519_5end |
EntrezGene: | CDV3 |
HGNC: | 26928 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.24e-21 | 136 |
hematopoietic stem cell | 2.89e-19 | 168 |
hematopoietic lineage restricted progenitor cell | 4.04e-18 | 120 |
nongranular leukocyte | 1.71e-17 | 115 |
hematopoietic oligopotent progenitor cell | 2.05e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-17 | 161 |
hematopoietic cell | 5.74e-17 | 177 |
classical monocyte | 3.88e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.88e-11 | 42 |
defensive cell | 4.82e-10 | 48 |
phagocyte | 4.82e-10 | 48 |
granulocyte monocyte progenitor cell | 5.14e-10 | 67 |
myeloid leukocyte | 1.29e-09 | 72 |
lymphoid lineage restricted progenitor cell | 1.98e-09 | 52 |
lymphocyte | 2.68e-09 | 53 |
common lymphoid progenitor | 2.68e-09 | 53 |
myeloid cell | 6.53e-09 | 108 |
common myeloid progenitor | 6.53e-09 | 108 |
myeloid lineage restricted progenitor cell | 7.80e-09 | 66 |
macrophage dendritic cell progenitor | 2.05e-08 | 61 |
monopoietic cell | 6.70e-08 | 59 |
monocyte | 6.70e-08 | 59 |
monoblast | 6.70e-08 | 59 |
promonocyte | 6.70e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.18e-16 | 114 |
hematopoietic system | 1.45e-11 | 98 |
blood island | 1.45e-11 | 98 |
hemolymphoid system | 3.25e-09 | 108 |
bone marrow | 6.21e-08 | 76 |
bone element | 4.66e-07 | 82 |
regional part of forebrain | 7.28e-07 | 41 |
forebrain | 7.28e-07 | 41 |
anterior neural tube | 7.28e-07 | 41 |
future forebrain | 7.28e-07 | 41 |
regional part of cerebral cortex | 8.12e-07 | 22 |