FFCP PHASE1:Hg19::chr4:56815102..56815127,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9662 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29086 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506809_5end | |||
|description=CAGE_peak_2_at_CEP135_5end | |||
|id=chr4:56815102..56815127,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.86e-26!172;CL:0000566!1.86e-26!172;CL:0002032!4.99e-26!165;CL:0000837!4.99e-26!165;CL:0000988!1.26e-23!182;CL:0000763!8.68e-19!112;CL:0000049!8.68e-19!112;CL:0002031!1.64e-16!124;CL:0000738!2.80e-16!140;CL:0002087!2.36e-14!119;CL:0002057!9.38e-12!42;CL:0000860!1.04e-11!45;CL:0000557!7.14e-10!71;CL:0000839!7.95e-10!70;CL:0002009!3.75e-09!65;CL:0000766!1.57e-08!76;CL:0002194!1.69e-08!63;CL:0000576!1.69e-08!63;CL:0000040!1.69e-08!63;CL:0000559!1.69e-08!63;CL:0000945!3.45e-08!24;CL:0000826!3.45e-08!24;CL:0000542!4.41e-07!53;CL:0000051!4.41e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.30e-10;33!CL:0002057;8.30e-10;33!CL:0000945;9.57e-09;24!CL:0000473;3.09e-07;39!CL:0000234;3.09e-07;39!CL:0000576;3.29e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.87e-26,168;CL:0002032,1.00e-25,161;CL:0000837,1.00e-25,161;CL:0000988,4.52e-24,177;CL:0000763,1.31e-18,108;CL:0000049,1.31e-18,108;CL:0002031,5.18e-16,120;CL:0000738,8.35e-16,136;CL:0002087,5.70e-14,115;CL:0000860,2.87e-12,42;CL:0002057,2.87e-12,42;CL:0000473,1.18e-10,48;CL:0000234,1.18e-10,48;CL:0000557,1.82e-09,67;CL:0000839,2.04e-09,66;CL:0002009,7.13e-09,61;CL:0000945,1.59e-08,24;CL:0000826,1.59e-08,24;CL:0002194,3.40e-08,59;CL:0000576,3.40e-08,59;CL:0000040,3.40e-08,59;CL:0000559,3.40e-08,59;CL:0000766,3.93e-08,72;CL:0000542,4.81e-07,53;CL:0000051,4.81e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.68e-09;42 | |||
|ontology_enrichment_disease=DOID:162!1.78e-20!235;DOID:14566!1.29e-19!239;DOID:2531!3.08e-12!51;DOID:0060083!3.08e-12!51;DOID:0050686!7.80e-12!137;DOID:0050687!2.48e-11!143;DOID:1240!2.89e-10!39;DOID:305!2.13e-08!106;DOID:8692!3.98e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.07e-07;39!DOID:2531;3.49e-07;51!DOID:0060083;3.49e-07;51!DOID:8692;3.84e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.50e-18,235;DOID:14566,2.24e-17,239;DOID:2531,5.60e-12,51;DOID:0060083,5.60e-12,51;DOID:0050686,2.00e-10,137;DOID:1240,3.54e-10,39;DOID:0050687,1.09e-09,143;DOID:8692,6.02e-08,31;DOID:305,6.12e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.64e-08!86;UBERON:0002371!6.72e-08!80;UBERON:0002390!2.77e-07!102;UBERON:0003061!2.77e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.73e-08,82;UBERON:0002371,1.18e-07,76;UBERON:0002390,4.64e-07,98;UBERON:0003061,4.64e-07,98;UBERON:0002405,7.33e-07,93 | |||
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| |||
|short_description=p2@CEP135 | |||
}} |
Revision as of 01:08, 22 January 2014
Short description: | p2@CEP135 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CEP135_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506809_5end |
EntrezGene: | CEP135 |
HGNC: | 29086 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.87e-26 | 168 |
hematopoietic oligopotent progenitor cell | 1.00e-25 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-25 | 161 |
hematopoietic cell | 4.52e-24 | 177 |
myeloid cell | 1.31e-18 | 108 |
common myeloid progenitor | 1.31e-18 | 108 |
hematopoietic lineage restricted progenitor cell | 5.18e-16 | 120 |
leukocyte | 8.35e-16 | 136 |
nongranular leukocyte | 5.70e-14 | 115 |
classical monocyte | 2.87e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.87e-12 | 42 |
defensive cell | 1.18e-10 | 48 |
phagocyte | 1.18e-10 | 48 |
granulocyte monocyte progenitor cell | 1.82e-09 | 67 |
myeloid lineage restricted progenitor cell | 2.04e-09 | 66 |
macrophage dendritic cell progenitor | 7.13e-09 | 61 |
lymphocyte of B lineage | 1.59e-08 | 24 |
pro-B cell | 1.59e-08 | 24 |
monopoietic cell | 3.40e-08 | 59 |
monocyte | 3.40e-08 | 59 |
monoblast | 3.40e-08 | 59 |
promonocyte | 3.40e-08 | 59 |
myeloid leukocyte | 3.93e-08 | 72 |
lymphocyte | 4.81e-07 | 53 |
common lymphoid progenitor | 4.81e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.73e-08 | 82 |
bone marrow | 1.18e-07 | 76 |
hematopoietic system | 4.64e-07 | 98 |
blood island | 4.64e-07 | 98 |
immune system | 7.33e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.50e-18 | 235 |
disease of cellular proliferation | 2.24e-17 | 239 |
hematologic cancer | 5.60e-12 | 51 |
immune system cancer | 5.60e-12 | 51 |
organ system cancer | 2.00e-10 | 137 |
leukemia | 3.54e-10 | 39 |
cell type cancer | 1.09e-09 | 143 |
myeloid leukemia | 6.02e-08 | 31 |
carcinoma | 6.12e-07 | 106 |