FFCP PHASE1:Hg19::chr4:159131596..159131623,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25633 | |||
|TSSclassifier=strong | |||
|UniProt=D6RAX5 | |||
|association_with_transcript=0bp_to_ENST00000512481_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_TMEM144_5end | |||
|id=chr4:159131596..159131623,+ | |||
|ontology_enrichment_celltype=CL:0002194!2.50e-07!63;CL:0000576!2.50e-07!63;CL:0000040!2.50e-07!63;CL:0000559!2.50e-07!63;CL:0002009!3.54e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000235;8.37e-10;6!CL:0000473;1.59e-08;39!CL:0000234;1.59e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.89e-10,59;CL:0000576,1.89e-10,59;CL:0000040,1.89e-10,59;CL:0000559,1.89e-10,59;CL:0002009,6.60e-10,61;CL:0000235,9.13e-10,6;CL:0000557,2.16e-09,67;CL:0000839,1.06e-08,66;CL:0000766,1.71e-07,72;CL:0000473,2.46e-07,48;CL:0000234,2.46e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.29e-12;82!UBERON:0006241;9.16e-07;3!UBERON:0003057;9.16e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-35!115;UBERON:0001049!1.06e-28!57;UBERON:0005068!1.06e-28!57;UBERON:0006241!1.06e-28!57;UBERON:0007135!1.06e-28!57;UBERON:0005743!1.62e-25!86;UBERON:0001017!1.17e-24!82;UBERON:0000073!2.87e-23!94;UBERON:0001016!2.87e-23!94;UBERON:0002616!3.00e-23!59;UBERON:0000955!1.07e-22!69;UBERON:0006238!1.07e-22!69;UBERON:0003080!4.65e-22!42;UBERON:0002780!1.23e-21!41;UBERON:0001890!1.23e-21!41;UBERON:0006240!1.23e-21!41;UBERON:0003075!3.47e-20!86;UBERON:0007284!3.47e-20!86;UBERON:0002020!5.08e-19!34;UBERON:0003528!5.08e-19!34;UBERON:0001893!5.15e-19!34;UBERON:0002346!9.75e-19!90;UBERON:0002791!3.15e-18!33;UBERON:0001869!2.43e-17!32;UBERON:0002619!6.19e-15!22;UBERON:0000062!7.77e-14!511;UBERON:0001950!2.01e-13!20;UBERON:0003056!9.40e-13!61;UBERON:0000956!4.78e-12!25;UBERON:0000203!4.78e-12!25;UBERON:0004121!4.45e-10!169;UBERON:0000153!1.46e-09!129;UBERON:0007811!1.46e-09!129;UBERON:0000924!1.50e-09!173;UBERON:0006601!1.50e-09!173;UBERON:0000033!1.66e-09!123;UBERON:0002308!6.28e-09!9;UBERON:0000125!6.28e-09!9;UBERON:0002420!1.09e-08!9;UBERON:0007245!1.09e-08!9;UBERON:0010009!1.09e-08!9;UBERON:0010011!1.09e-08!9;UBERON:0000454!1.09e-08!9;UBERON:0002298!7.48e-08!8;UBERON:0003076!8.63e-08!15;UBERON:0003057!8.63e-08!15;UBERON:0009663!3.08e-07!7;UBERON:0000922!5.71e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.09e-34;34!UBERON:0003528;9.46e-34;34!UBERON:0002020;9.46e-34;34!UBERON:0002791;5.13e-33;32!UBERON:0001869;6.10e-33;32!UBERON:0002619;2.92e-29;22!UBERON:0002780;6.42e-29;41!UBERON:0001890;6.42e-29;41!UBERON:0000073;5.14e-28;53!UBERON:0002616;5.14e-28;53!UBERON:0001950;5.12e-26;20!UBERON:0000956;4.02e-25;25!UBERON:0000203;4.02e-25;25!UBERON:0001017;1.91e-19;75!UBERON:0000955;7.30e-19;68!UBERON:0000125;2.51e-17;9!UBERON:0002308;2.51e-17;9!UBERON:0002420;8.44e-17;9!UBERON:0007245;8.44e-17;9!UBERON:0010009;8.44e-17;9!UBERON:0010011;8.44e-17;9!UBERON:0000454;8.44e-17;9!UBERON:0001016;1.03e-15;83!UBERON:0004732;8.28e-14;13!UBERON:0009663;1.02e-13;7!UBERON:0002298;1.82e-12;6!UBERON:0004733;4.41e-12;12!UBERON:0002028;4.41e-12;12!UBERON:0000200;1.52e-11;6!UBERON:0007023;4.63e-10;114!UBERON:0000349;9.62e-10;5!UBERON:0001871;1.79e-09;6!UBERON:0011216;3.23e-08;132!UBERON:0000369;3.80e-08;4!UBERON:0002435;3.80e-08;4!UBERON:0000204;3.80e-08;4!UBERON:0002680;2.42e-07;9!UBERON:0001895;2.42e-07;9!UBERON:0000988;4.31e-07;3!UBERON:0001896;5.03e-07;3!UBERON:0005290;5.03e-07;3!UBERON:0002240;9.16e-07;3!UBERON:0005174;9.16e-07;3!UBERON:0001137;9.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.31e-56,56;UBERON:0005068,1.31e-56,56;UBERON:0006241,1.31e-56,56;UBERON:0007135,1.31e-56,56;UBERON:0000073,1.56e-51,53;UBERON:0002616,1.56e-51,53;UBERON:0000955,5.07e-43,68;UBERON:0006238,5.07e-43,68;UBERON:0001017,5.10e-42,81;UBERON:0002780,2.70e-40,41;UBERON:0001890,2.70e-40,41;UBERON:0003080,2.70e-40,41;UBERON:0006240,2.70e-40,41;UBERON:0003528,2.93e-40,34;UBERON:0002020,2.93e-40,34;UBERON:0001893,3.02e-40,34;UBERON:0001016,2.28e-38,89;UBERON:0003075,5.51e-38,82;UBERON:0007284,5.51e-38,82;UBERON:0002791,1.01e-36,32;UBERON:0001869,1.30e-36,32;UBERON:0002346,1.56e-35,86;UBERON:0007023,2.67e-33,114;UBERON:0002619,2.94e-29,22;UBERON:0010371,3.95e-28,104;UBERON:0001950,5.07e-26,20;UBERON:0003056,9.60e-26,61;UBERON:0000956,4.04e-25,25;UBERON:0000203,4.04e-25,25;UBERON:0010314,1.82e-22,132;UBERON:0011216,3.03e-18,223;UBERON:0000125,2.50e-17,9;UBERON:0002308,2.50e-17,9;UBERON:0003076,6.88e-17,15;UBERON:0003057,6.88e-17,15;UBERON:0002420,8.20e-17,9;UBERON:0007245,8.20e-17,9;UBERON:0010009,8.20e-17,9;UBERON:0010011,8.20e-17,9;UBERON:0000454,8.20e-17,9;UBERON:0000025,9.53e-16,192;UBERON:0004121,2.15e-15,171;UBERON:0000924,2.15e-15,171;UBERON:0006601,2.15e-15,171;UBERON:0004732,8.00e-14,13;UBERON:0009663,1.02e-13,7;UBERON:0002298,1.83e-12,6;UBERON:0004733,4.26e-12,12;UBERON:0002028,4.26e-12,12;UBERON:0007277,4.26e-12,12;UBERON:0000200,1.56e-11,6;UBERON:0004111,1.15e-10,240;UBERON:0000923,1.94e-10,560;UBERON:0010316,1.94e-10,560;UBERON:0005291,1.94e-10,560;UBERON:0006598,1.94e-10,560;UBERON:0010317,1.94e-10,560;UBERON:0002532,1.94e-10,560;UBERON:0002050,3.51e-10,564;UBERON:0000349,9.48e-10,5;UBERON:0001871,1.78e-09,6;UBERON:0005423,3.96e-09,581;UBERON:0000922,5.71e-09,592;UBERON:0000369,3.78e-08,4;UBERON:0002435,3.78e-08,4;UBERON:0000204,3.78e-08,4;UBERON:0010082,3.78e-08,4;UBERON:0002371,1.48e-07,76;UBERON:0000483,1.94e-07,306;UBERON:0002680,2.35e-07,9;UBERON:0001895,2.35e-07,9;UBERON:0010092,2.35e-07,9;UBERON:0000119,3.17e-07,309;UBERON:0000988,4.32e-07,3;UBERON:0001896,5.04e-07,3;UBERON:0005290,5.04e-07,3;UBERON:0010096,5.04e-07,3;UBERON:0002240,9.27e-07,3;UBERON:0005174,9.27e-07,3;UBERON:0001137,9.27e-07,3;UBERON:0001872,9.84e-07,5 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.92614043327834,6.80176698639857,5.6666624879521,0,1.13362783106643,0,0.464858073811369,2.05583944010913,0.929119112685311,0.575384784644301,4.35473201099471,2.36482229888585,1.37898272294647,0.645484683583826,1.35426486594342,0.188242339542605,1.36453075028923,0.674170453335254,0.306083892370903,0.962787081228281,0,1.31940520074686,2.79249120670285,2.98357325372886,0,0,0.622822248995575,1.50749199154046,3.12889751052121,2.38907729175628,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,4.51877810467109,0,0,5.19275829847493,5.39802185627728,4.52057065764142,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0.71153252537342,1.00416183829401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.243947412259191,0.132529768321485,0.69716365721711,0.932949495138334,1.51392510525377,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.241011029883482,0.110293972732394,0,0.474541238222193,0.269662616320329,0.588664395376038,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,2.21379189377604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18568910348575,3.7440682422278,2.97262324577457,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.099972991182057,1.2162378064119,5.02257091432126,4.21667878966063,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.502548796003046,0,0,0,0,0,0.500170521059677,0,0,0,0.315404830067869,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0,0,0.0821271560138091,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,0.412164046590889,0,0.330037999682352,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,1.1490322207942,0,0,1.40398589056729,0,0.156679895773023,5.01268954180134,0.677167111206413,0.642352300414798,0,0,0,0.307240764308458,0.671028323677248,0,0.390776190804081,0,2.46174797895425,0,0,0,0.935702702041099,0.879049075631364,1.57768678274367,0,0,0,0.296964680832639,1.22864280839693,11.9297717731956,12.8009168933567,0.111308705022906,0,0,1.39473591775749,0.552567831062295,1.25966373927138,0.102268682502155,0,0,0.269605053441981,0.537063524026827,0,0.0986434056369336,0,0,22.29465316019,43.5082380379082,1.99613798001194,0.260427761085233,1.13697999995054,0.724999575434793,0.1137934482855,0,0.472775363535873,0,0.291604613383254,0,27.457982960229,8.20055782652774,12.2065389053667,2.76448149828062,13.8907380908167,15.795748595086,0,0,0.230850775511391,0.227884111694002,0.69169171316418,0.269272933229316,0,0.638002319463839,0.0915975934018623,1.06606955203727,0,0.31396051279005,0.332423363800313,0.902382642468723,0.588187602953219,0.335643173951685,0,1.58936578980379,0.632994193584081,1.46909527343233,1.13082457147153,0.865554558968364,0,2.74218449960351,6.11030144933625,0,0,0,86.1386479493053,0,71.9191848376791,0,0,0.728341138602278,0.394584402849391,9.67925728389311,0,0.758238955541855,0.150323419414493,0.207376382794494,0,0,0,0,0.853828638089378,0,0.347119476670262,0,0,2.09672001890436,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,33.3647894687481,0.586654148204409,0.240476460754601,1.70762395791482,0,0.432271251462318,6.75765917378902,1.54435498075768,0,0.248505071130865,0,0,0.104602846312333,0,0.288950589901519,99.6697679258251,62.2919473958568,2.55493176133945,0.429765441419957,0,0.558564802544508,1.60412296808179,0.717873024576814,0.599037001496973,0.858452096273142,0.223171457441873,0.470284307407084,0,2.32991899054908,1.18174773460835,1.31865373409866,2.15691340333392,0.0984274815147488,0,19.0855125554233,19.0684768556206,0.803765742325096,0,0.415440338029185,0.2249738915515,0,16.1593820710346,0,0.788057072991982,0.157363764404994,0,31.5545717225807,0,0.714695326373367,1.32418394073086,0.25426853765475,0,0,0,0,0.328370082997356,0,0,0.146552233678082,0,65.0293270498599,45.0913171942573,1.53978154095896,0,0.533937062838473,0.78602152549833,0.828478110694391,0.992332043623902,0,0,0,0,0.7520696820681,0.306345576763462,0.983617892129413,0.157054096250234,11.5188863395708,20.2563599737259,17.9023030910295,49.8866000250362,42.9295429447618,52.9682317090001,0.138348634936231,0,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0.50313580350515,0,0.457680136793847,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,22.2596082204287,0.194860308839388,0.132864840313363,0.327130788511688,0,0.737318726261158,1.47918486351039,0,0.426766918776564,0,0,0,0.139879507719444,0,0,0,0.471797825567689,0,0,0,0.123935764259002,0,0,0,0,0,0,28.6462343930209,28.339315265117,21.7102048317726,47.1767637753737,0.756215088665154,18.6033009128746,26.6434815292554,289.821923126083,0.294443155503077,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.887136517302272,30.6620634167512,39.8349830293062,19.8419324641137,30.8200837542387,0,0,0.496211178389294,0,0.511049710558381,0.535701835878287,0.672567444437648,0.606965604236632,0,0.532214220975833,0,0,54.5796955803959,25.3225178216969,0,0.222462803784138,0.313972371402056,12.2550160134481,0.280272163313789,0,0.215927591218621,0,0.0714765441766563,0,0,0.347716544605159,0,0,0,0.691259661814092,0,0.236664001461131,0,0.423387050190929,0,0,0,0.335566295393377,0.196300467230486,1.34109717480496,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0,0.118920090777569,0,0,0,5.17066859323229,14.8620501142691,0.470317296361523,0.245148321753905,0.235676547101626,101.884094432657,71.8852288791548,3.3812458206672,0,0,0.128915775947154,0,0.357107877211315,0.352894871715692,0.802413666891683,0,0.458729283404541,78.2634124006924,0,17.4058214888742,0.436350690340377,5.290268405154,0,0,0,0,1.20192129160065,0.126698501011437,0.305966489225945,0,1.01084389488329,0.250707539292375,0.454672189309436,0,85.4044522642543,61.6460655336896,0.213233981900981,0.476128862927481,0.0645889098360061,0.124149428591716,0,0.700118741059814,0.808468755832877,0,0,0.202056159043763,0.645499848534087,0,0.244209805832924,0.533636729388577,0,0.0898252021065869,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p3@TMEM144 | |||
}} |
Revision as of 03:42, 22 January 2014
Short description: | p3@TMEM144 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM144_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000512481_5end |
EntrezGene: | TMEM144 |
HGNC: | 25633 |
UniProt: | D6RAX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.89e-10 | 59 |
monocyte | 1.89e-10 | 59 |
monoblast | 1.89e-10 | 59 |
promonocyte | 1.89e-10 | 59 |
macrophage dendritic cell progenitor | 6.60e-10 | 61 |
macrophage | 9.13e-10 | 6 |
granulocyte monocyte progenitor cell | 2.16e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.06e-08 | 66 |
myeloid leukocyte | 1.71e-07 | 72 |
defensive cell | 2.46e-07 | 48 |
phagocyte | 2.46e-07 | 48 |